Mpro026147.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melinopterus prodromus
Gene Symbol
-
Assembly
GCA_964023965.1
Location
OZ030392.1:67978906-67992915[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.00037 0.037 16.1 0.5 2 21 27 46 27 47 0.93
2 21 0.0026 0.26 13.4 4.8 1 23 114 136 114 136 0.99
3 21 7.1 7.1e+02 2.6 3.0 2 19 141 158 140 160 0.90
4 21 1.9e-05 0.0019 20.2 6.9 1 23 164 186 164 186 0.99
5 21 0.016 1.6 11.0 5.5 1 23 192 214 192 215 0.96
6 21 0.0018 0.18 14.0 1.4 2 23 222 244 221 244 0.96
7 21 0.001 0.1 14.7 2.8 1 23 250 272 250 272 0.98
8 21 8.6e-06 0.00086 21.3 0.3 1 23 278 300 278 300 0.99
9 21 0.0015 0.15 14.2 1.8 1 21 339 359 339 360 0.93
10 21 0.3 30 7.0 4.4 1 23 431 453 431 453 0.98
11 21 9.3e-05 0.0093 18.0 3.1 1 23 457 480 457 480 0.98
12 21 2.2e-05 0.0022 20.0 1.9 1 23 486 508 486 508 0.99
13 21 0.01 1 11.6 7.2 1 23 514 536 514 536 0.98
14 21 0.0022 0.22 13.7 0.6 1 23 542 564 542 564 0.99
15 21 0.013 1.3 11.2 2.4 1 23 569 591 569 591 0.96
16 21 0.017 1.7 10.9 4.7 1 23 596 619 596 619 0.98
17 21 0.0039 0.39 12.9 4.2 1 23 625 647 625 647 0.95
18 21 0.015 1.5 11.1 0.2 1 23 652 674 652 674 0.98
19 21 0.0024 0.24 13.6 0.7 2 23 681 702 680 702 0.97
20 21 0.0015 0.15 14.2 0.6 3 21 743 761 742 762 0.94
21 21 0.0007 0.07 15.3 3.6 1 23 833 855 833 855 0.99

Sequence Information

Coding Sequence
ATGGAAAACAATATGACTATTTGTGTGCAGAATGAAGAAGAATCTGACCTAATTAACGACTCATCTCCAGACGAAAATGTTTGCGATTTATGCGGGTTCAAGTTCAGCCGAAAAAAGTATTTAACGAACCATTACAACGTCTGCAAGAACATAGACAATCCTGCCCTAAGGTTGGGTACAGATACAACTACTATTAAGAGTGAACATTTTGGAGAGAATGTCCTTGAGAAAGACTCAACAGTTACACAGATCATTCGCGTAAAGTTAGAAGAATTGGATTTCACTGAATCTACCGGCTCTACCATCGAACCTCTGGAGACGCAAACACCAGCCAAATCATTCAAATGCCGCAAGTGTCACTTCACAGCAGAAAACTCCACACAACTTCGAAAACATATGAAAGTACATAAGGGAAAGTCTAAATGTAGACACTGCGACTATACTACTAGAATACACGTCCATATGAGAACTCATACAGGCCAGAAACCGTTTCAGTGCGACAAATGTGACTATACCTGTAGACAAAGTACGCATCTTTTACGACATATGAGAATGCATACCGGCGTGAAGCCGTACAAATGTCAAAAATGCGACTACGCCAGCATACAAGGTTGTCATCTCGCCACGCACATTAGGACACATCACCCGGCAGAAAATCCACTCAAATGCAACAAATGCGACTTCTCTACAAAGCTACGTACTGATCTTACGCAGCACATAAGAAATATCCACACAAcccaaaaaatacataaatgcaGTATCTGCGAGTACGTTACTACATATCGGAAAGATGTCGCAAAACATATGAGGAAGCATACCGGTGAAAAGCCGTTCAAATGCAAAATCTGCGACTATGCTTCTGCGCAAAGTGCGGGCCTCAAACGGCATATGCTCACGCATACCGGCGAAAAACCGTTTCGTTGCACTCTTGGAACAACCATGGAAAATTCTATGACTATTTCTGTGCGGAATGAAGAAGGAAGTGAACTAATTGACGAATCATCTCGAGTCGAACATATTTGCAAATTATGCGGGTTCAAGTTCAGCCAACTAAAGTATTTAAAGAACCATTACAACGTCTGCAAGAACATAGAAGAACCTGCCGACAGGTTGGGTACTGCTACAACTACTATTAAAAGTGAAAATTTTGATGAGAATGAGCGGACCACGGTGCCTGAGAAAGACGCCACCATTACACCAATCATTCGCCTAAAACTTGAAGAGTTGGATTTCACTGAATGTACCGATTCTACAATCGAACCTCTGGAGGCGCAAACACACGCCGAAGCATTCAAATGCCGCAAGTGTCACTTCACAGCAGAAAACTCAACACAACTTGATAAACATACGAAAGAACATAAGCGAAAGTTTAAATGTAGAACCTGTGACTATACGACATCCAAACCCGGTAAACTCACAAAACATATGAGAAGAAGACATCCCACAGAAAAACGATTTCAATGCAGCAAATGTGATTATATTGCTGCCAGAAACGACCATCTTAAACTACATATGAGAACTCATACAGGAAAAAAACCATTTCGTTGCAGCAAATGTAACTATAGTAGTGCGAGCAGTTGCCACGTCAAAAGACATATGAGACAGCACGGTGGAGACAAGCCATTCAAATGCACCATCTGTGATTACACAGCTGAAAGCTTAGCACAAATAACGAGGCATAccaaaacgcatacaggaggaAAACATCACTGCGACAAATGTGACTACGCTACGGCGGATAGAGCATCGCTAAACGTACATAAGACTACGCATAATACgagaatatataaatgcacCCTTTGTGACTTTACTAGTACACAAAGCCATCACGTGACAATACACTTGGAAACTCGACACGAAGGTCAGAAACCGTTTCTATGTAAGAAATGCGACTACGCTACCACACACCGTAGTCTCCTTAAGGAACATAAGAGACAGCACGCTGGTAAACAACATAAATGCACCATCTGCGATTATTGGACTATTAACAAAGGAGACTTGATCCTTCACATCGCTAcccatacaggagaaaaaccactGAAATGCTCCGAATGTAGTTATGCTTGTGCAGGAGAGTCTGCTCTTAAATCCCATATGACGACTCATAGTGACCAGAGACCATTTCAATTTCGGACTATAACCATGGAAAATAGGAGGACTATTGTTGTGAAGAATGAAGAAGGAAGTGACCTAATTGATAACTCATCTCCAGCAAAagataatatttgcaatttatgcGGGTTCAAGTTCACGAAACAAAAGTATTTAACGAACCATTACAACATCTGCAAGGACATAAAAAATCCTGCCGAAAAGTTGGGTACAGATACAAGTACGATTAAAAATGAACATTTTGACAAGAAAGTGCAGACCATGTTGCTGGAGAAAGACTCAACAATTACACCAAtCATTCGCGTCAAATTTGAAGAATTGGATTTCACCGAATGTACCGATTCTACAATCGAACCTCTGGAGGCGCAAACACCACCCGAAGCGTTCAAATGCAGCAAGTGTCACTTCACGGCAGATAACTCAACACAACTTGAAAAACATATGAAAGTGCATAAGGGAAAGTTTAAATGTAGAAGCTGTGACTATACCACATCAAAACACGTTGTCTTGTATATTCCTGTGCAGATTCTGACGGAAGATGACCAGTGCGTCAAAACTGGTACcaaagtataa
Protein Sequence
MENNMTICVQNEEESDLINDSSPDENVCDLCGFKFSRKKYLTNHYNVCKNIDNPALRLGTDTTTIKSEHFGENVLEKDSTVTQIIRVKLEELDFTESTGSTIEPLETQTPAKSFKCRKCHFTAENSTQLRKHMKVHKGKSKCRHCDYTTRIHVHMRTHTGQKPFQCDKCDYTCRQSTHLLRHMRMHTGVKPYKCQKCDYASIQGCHLATHIRTHHPAENPLKCNKCDFSTKLRTDLTQHIRNIHTTQKIHKCSICEYVTTYRKDVAKHMRKHTGEKPFKCKICDYASAQSAGLKRHMLTHTGEKPFRCTLGTTMENSMTISVRNEEGSELIDESSRVEHICKLCGFKFSQLKYLKNHYNVCKNIEEPADRLGTATTTIKSENFDENERTTVPEKDATITPIIRLKLEELDFTECTDSTIEPLEAQTHAEAFKCRKCHFTAENSTQLDKHTKEHKRKFKCRTCDYTTSKPGKLTKHMRRRHPTEKRFQCSKCDYIAARNDHLKLHMRTHTGKKPFRCSKCNYSSASSCHVKRHMRQHGGDKPFKCTICDYTAESLAQITRHTKTHTGGKHHCDKCDYATADRASLNVHKTTHNTRIYKCTLCDFTSTQSHHVTIHLETRHEGQKPFLCKKCDYATTHRSLLKEHKRQHAGKQHKCTICDYWTINKGDLILHIATHTGEKPLKCSECSYACAGESALKSHMTTHSDQRPFQFRTITMENRRTIVVKNEEGSDLIDNSSPAKDNICNLCGFKFTKQKYLTNHYNICKDIKNPAEKLGTDTSTIKNEHFDKKVQTMLLEKDSTITPIIRVKFEELDFTECTDSTIEPLEAQTPPEAFKCSKCHFTADNSTQLEKHMKVHKGKFKCRSCDYTTSKHVVLYIPVQILTEDDQCVKTGTKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-