Basic Information

Insect: Melinopterus prodromus
Gene Symbol: -
Assembly: GCA_964023965.1
Location: OZ030393.1:25613449-25619101[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0001 0.01 17.9 2.0 1 23 153 175 153 175 0.97

2 12 2.1e-05 0.0021 20.0 0.1 1 23 182 204 182 204 0.98

3 12 0.014 1.4 11.1 0.2 2 23 235 256 234 256 0.95

4 12 8.9e-07 8.9e-05 24.4 4.8 2 23 260 281 259 281 0.98

5 12 0.00012 0.012 17.6 2.2 1 23 287 309 287 309 0.97

6 12 2.3e-07 2.3e-05 26.2 1.4 1 23 315 337 315 337 0.98

7 12 2.3e-05 0.0023 19.9 0.7 1 23 343 365 343 365 0.95

8 12 4.8e-05 0.0048 18.9 0.2 1 23 371 393 371 393 0.97

9 12 5.8e-06 0.00058 21.8 2.8 1 23 399 421 399 421 0.98

10 12 0.00016 0.016 17.2 0.8 1 23 427 449 427 449 0.99

11 12 1.3e-06 0.00013 23.8 0.7 1 23 455 477 455 477 0.98

12 12 6.9e-06 0.00069 21.6 0.7 1 23 483 505 483 505 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0001	0.01	17.9	2.0	1	23	153	175	153	175	0.97
2	12	2.1e-05	0.0021	20.0	0.1	1	23	182	204	182	204	0.98
3	12	0.014	1.4	11.1	0.2	2	23	235	256	234	256	0.95
4	12	8.9e-07	8.9e-05	24.4	4.8	2	23	260	281	259	281	0.98
5	12	0.00012	0.012	17.6	2.2	1	23	287	309	287	309	0.97
6	12	2.3e-07	2.3e-05	26.2	1.4	1	23	315	337	315	337	0.98
7	12	2.3e-05	0.0023	19.9	0.7	1	23	343	365	343	365	0.95
8	12	4.8e-05	0.0048	18.9	0.2	1	23	371	393	371	393	0.97
9	12	5.8e-06	0.00058	21.8	2.8	1	23	399	421	399	421	0.98
10	12	0.00016	0.016	17.2	0.8	1	23	427	449	427	449	0.99
11	12	1.3e-06	0.00013	23.8	0.7	1	23	455	477	455	477	0.98
12	12	6.9e-06	0.00069	21.6	0.7	1	23	483	505	483	505	0.98

Sequence Information

Coding Sequence: ATGGATGAGGAGCCCCAACAGAACGTTTGCAGGGCCTGCATGACCGAGCAAGGGGACTTTCagtcaatttttatgaaacctcAAACCACAGAAATAGACATGCAACTGGCCGAGATGATTATGGCGTATACCTCGGTGCAGGTAAAATTCGGAGACGGCCTTCCTGAGGAAATATGTGGTAATTGTGCGAGCAAAATTGAGGAGATGTATTTATTTAAGTTGCAATGTGAAGCGTCAGATATTTCATTACGAGATCGATTGGAACAGAAGATTGGGAATTCGAAAGAGGAAACTACGCAAACGGAGTTGCATGATTCGGAGAATATATTAGTAAAACCGgagatttataattttaatggaaacGACGAGGAAATCGATGATTTTTCTGTACCCTGCGATTCTGAGGAAACGATAGTTGAGACCGAAGAACCAAAAATAAGCACGCATGTGAAGCTACATGAATGTGATATATGTCTGAGACCTTTCGTTCGGCAAAGTCTTCTCCTAAAACACAAAAAGAAACATATTCCGGATTCAGAAGAATTTGAATGTGACATTTGTACGAAAGCATTTGCCACTCAAGATTTACTCGATACGCACGAGATGACACATATTAAATTGGAGGATAGCGGGTCTCTGATAGAGACTGAAGACACAGAAACAAATACCAGCGACGGGGAATTTAAAGCAgacatttgtttgaaatgtagAACTTGTGATGCTGAATTCATCGATTCccaagaatttttgaaacatgtTGACGTGCATAAATCAAATCAATGCCCTCAGTGCAATAAGAAATTCTCAAAAAAGTCTCATCTAACGAGACATCTTAAGGTGCACACACACGACAGGCCCCATAATTGTAAACTCTGTGGGAAGGGCTTTGCACGAACTTTCCAATATTTGAACCACATGAATGTCCATTCAGGAGTCAAACCTCACGTGtgtgatatttgcaataaaGgtTTTAATCAAATATCAAATCTGAAAGATCACATGCGAACGCATAATGGCGAGAAACCATTCCTCTGTTCAACGTGCGGCAAAGGATTCAACCAGCTTGGGAACTTGAGGCAGCATACAATCAGGCATACCGGAATAAAGGCACACATCTGCCCCACGTGCGGCAGTGGCTTTGCCAGCAAAGGTGAGCTGAGCGCTCACCTTCGGAAACACACCGggGCAAGACCATTTGTGTGCAGCGTATGCAACCATGGTTTTACTACATCCAGTTCACTGACGAAGCACAAACGCATTCACTCGGGCGAGAAGCCCTACGAGTGCGAAGTGTGCAAGATGAAATTCTCAAGGTCGGGAATCCTCGCTCGCCACAAGAGGACGCACACAGGCGAGAAGCCGTATGTCTGTCAGTACTGCTCGAAAGCGTTCTCGCAATCGAACGATCTCAGCTCGCACCTTCGAAttcatacaggcgagaaaccatataTATGCGACATGTGTGGATCAGCATTTCGGCAGAGTTCTGCGCTAAAAACGCACAAAAAGACACATATGGACAGGGGGGCCAcgttggaaaggagaattaacGCAATCGGACTGATGCAGGCCCCATTTTTGAGTGGCGTAGGCGATAGCTTGTAG
Protein Sequence: MDEEPQQNVCRACMTEQGDFQSIFMKPQTTEIDMQLAEMIMAYTSVQVKFGDGLPEEICGNCASKIEEMYLFKLQCEASDISLRDRLEQKIGNSKEETTQTELHDSENILVKPEIYNFNGNDEEIDDFSVPCDSEETIVETEEPKISTHVKLHECDICLRPFVRQSLLLKHKKKHIPDSEEFECDICTKAFATQDLLDTHEMTHIKLEDSGSLIETEDTETNTSDGEFKADICLKCRTCDAEFIDSQEFLKHVDVHKSNQCPQCNKKFSKKSHLTRHLKVHTHDRPHNCKLCGKGFARTFQYLNHMNVHSGVKPHVCDICNKGFNQISNLKDHMRTHNGEKPFLCSTCGKGFNQLGNLRQHTIRHTGIKAHICPTCGSGFASKGELSAHLRKHTGARPFVCSVCNHGFTTSSSLTKHKRIHSGEKPYECEVCKMKFSRSGILARHKRTHTGEKPYVCQYCSKAFSQSNDLSSHLRIHTGEKPYICDMCGSAFRQSSALKTHKKTHMDRGATLERRINAIGLMQAPFLSGVGDSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00138327;
90% Identity: iTF_00138327;
80% Identity: -