Mpro046708.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melinopterus prodromus
Gene Symbol
-
Assembly
GCA_964023965.1
Location
OZ030396.1:40669434-40709656[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.00054 0.054 15.6 1.5 1 21 9 29 9 30 0.93
2 18 0.0026 0.26 13.5 3.2 1 23 138 160 138 160 0.99
3 18 0.00027 0.027 16.5 1.1 1 21 254 274 254 275 0.93
4 18 0.0033 0.33 13.1 2.2 1 23 383 405 383 405 0.99
5 18 0.0031 0.31 13.2 2.5 1 22 411 432 411 432 0.96
6 18 0.012 1.2 11.4 1.6 1 21 487 507 487 508 0.94
7 18 8.6e-06 0.00086 21.3 2.3 1 23 810 832 810 832 0.99
8 18 4.9e-06 0.00049 22.0 1.5 1 23 838 860 838 860 0.99
9 18 0.13 13 8.1 7.8 1 23 866 888 866 888 0.99
10 18 0.034 3.4 9.9 0.0 1 23 894 916 894 916 0.95
11 18 0.00012 0.012 17.6 0.9 1 23 922 944 922 944 0.99
12 18 1.2e-05 0.0012 20.8 2.6 1 23 950 972 950 972 0.99
13 18 0.00084 0.084 15.0 1.6 1 23 978 1000 978 1000 0.98
14 18 0.0037 0.37 13.0 5.5 1 23 1006 1028 1006 1028 0.99
15 18 0.00026 0.026 16.6 2.5 1 23 1034 1056 1034 1056 0.98
16 18 0.00011 0.011 17.8 2.4 1 23 1062 1084 1062 1084 0.99
17 18 1.3e-05 0.0013 20.7 0.3 1 23 1090 1112 1090 1112 0.99
18 18 0.00043 0.043 15.9 2.8 1 23 1118 1140 1118 1140 0.99

Sequence Information

Coding Sequence
ATGGACTCATGCTCGCTCGAAAAGTTCATGTGTAGTTTATGCGGATACAAGTTTAGCCAACAACGGTATTTAACTAATCATTTCAAGCTTTGCAAGGATGCCGATGATCCTGCCGATAAGTTGGGCGCAGACATAAATACCattaaaaaggaaattaaaaGTGAAGATGAGATACAGAGCATGGAATTGTTTGACGAAGACACAACAACCGAACCGATATTTGACATAAAACTCGAAGAAATTGAATTCACTGAAACCACTATTTCTGGTACCGCTTGTCCACAATCTGGACAACCTCCGGAAAGTCTGAAGACAGAAACTTCAGAGGAACTGTTCACGTTAACCAAAGATGACTACGCAATTGCGCAACCAACGCAACTTGAAGAGAATGGCTATACACCACTAAAGCCATATAGTTGCACAACATGTGATTATACTTGTGCTAATATGTCTGTCTTTACAGTACATATGAGAAAGCACTCGGCAGAAACACCATATAAGTGTACCTGGTGGATGCGCGTGAAAATATACCCACATTTGAACGATGGCTGGGTATTCACTGGAATTGCGCTGTGTGCGGCGAGCGCAATAACAGATGTGCCAAGGGATGGCGCTACAATAGCGATAAACCAGTGGTCGGTTTTAAGGCAGCCCCACACCGCCACGATTTTCTTGCGAATCGCTatAGAAGATACATCAGAAAATATGTCTACTTTTGTGAAATGTGAAGAAACAACGGACTCATCCTGGGTCGAAAAGTTCATGTGCAATTTATGCGGATACAAGTTTCGCCAACAACAGGATTTAACAAATCATTTCAAGCTTTGCAAGGATGCCGATGATCCTGCCGATAAGTTGGGCGCAGACTTGATTACCattaaaaaggaaattaaaaGTGAAGATGAGATACAGAGCATGGAATTGTTTGACGAAGACACAGCAACTGAACCGATATTTGACATAAAACTCGAAGAAATTGAATTCACTGAAACCACTATTTCTGGTACCGCTTGTCCACAATCTGGACAACCTCCGGAAAGTCAGAAGACAGAAACTTCAGAGGAACTGTTCATGTTAACCAAAGATGACTACACAACTGCGCAGCCAACGCAACTTGAAGAGAATGGCTATACACCACTGAAGCCATATAGTTGCACAACATGTGATTATACTTGTGCTAATATGTCTGTTTTTGCAGTACATATGAGAAAGCACTCGGCAGAAACACCATATAAGTGTACCAGATGTGAGTATTCTTGTACGCACCAACCTTCTCTTGAAGTGCATATGAGTACGAACACAGGAGAgcaaccatttaagtgcacaatGGATGACTATGCTAGTGCTCATTCTGCTCTTACATTGCATatgGCAGACTCATCGGAAAATAAAACGACTATATATATGAAGTGTGAAGAAACAACGAACACAATAGCAGACTCATCCTCTTCCGGAAAGTTTGAGTGTAGTTTATGCAAGCTCAAATTCAgccaagaaaaatatttaacaaaccaTTTCAAGCTGTGTATCGTCAATACATTGGATGTAGACATAATAACTATTAAGAAGGAACGTAAAACTAAAGATGAGATGCACAGTATGAAATTGTTGGACGAACAACCAAAAACTGAACCAACATTTGACATAAAACTCGAAGACATCGAAATTACCGAAACCACTATTAGTGGTACCGCTTGTCCACAATCTGAACAACCTCCGGAACGCCTGAAGACAGAAACACCAGAGGACTTGTTCACGTTAACCAAGGTTGACTACATACCTGTGCCACTTGAAgattgtatgaaacttgctaaACTAAGGAAGGTTTATAGATTTGATATAAAACTCGAAGACATCGAATTTACCGAAACCACTGTTAGCGGGACCGCTAGTCCACAATCTGGACAACCTCCGGAACGTCTGGAGACAGAAACTCCAGAGGACTTGTTCACGTTAACCAAGGTTGACCACATAACTGTGCCACTTGAAGAGTGTATGAGAGTTGCTAAACTAGGGAAGatgGCAGACTCATCGGAAAACAATATGACTACGTATATGCAGTGTGAAGAATCAATGGACACAATAGCTGATTCATCCCCTTTTGgccaagaaaaatatttaacaaatcaTTTCAAGCTTTGCAAGGATGTCGAAGATCCTGTCGATACGTTGGATGTAGACATAATCACTATTAAAAAGGAACTTAAAACTGAAGACGAGATGCACTGTACGGAATTGTTTGACGAACACACAATAACTGAACCGACATTTCACGTAAAACTTGAAGAAATCGAATACACCGAAACCACTATTTCTGGTACCGCTTGTCCACAATCTGGACAACCTACAGAAGATCTGAAGACGGAAGCTCCAGAGGAACCAACGCAACCGGAAGAGCATGTGAAAGTAGATGAACCAGGAAAGCCTTATAGGTGCACCatgtgtgattatgcttgtgctTACCAATCTAATTTAACAGTGCATATGAggcagcatacaggagaaaagccGTTTAAGTGCGCTTTCTGTGATTATGCTTTTACAGTACGTTATAGTCTCACCAAGCATATGAGAATTCACACAGGACACAAACCATacaagtgcaccgtatgtgagtTTTCTAGTAGTCATTATTCTTGTCTTCGCATGCATAGGAAGCGGCACACGGCAGAAAAAACATTTGCGTGCGCCGCATGTGAATTTTCCGCTACAAATCAATCTGAGCTGACAGCGCATATCGTAACGCACAGAGAAGAGAAATCGTTTAAATGCACCGTGTGTGAATATGCTGGTAAGAATCAGAAAGGGCTTACAAaccatatgaaaacgcatactgGAGCAAAACCATtcaagtgcaccgtatgtgactatgcttgtaGTCGTAGTTTTGCCCTTCAAGTGCATATGAGGCGGCATACCGGCGAAAAACCGTATAATTGCAGCGTATGTGACTTTAATACTACAAATCATTCCGCTGTTAAcgtgcatatgagaacgcacaGCGGAGTgaaaccgtttaaatgtacCATGTGTGAATATGCTTGTGCACATCGCCGTTCTCTTAAACTGCATATGATGAAGCATACAGGCCAGAAACCATTCCAGTGCACCGtctgtgactatgctagtacaAGTCGTTGTTCCCTTACTGTGCACATGAGGCAGCATACTGAAGAGAAGCCGTTCAAGTGCACCGTGTGCGATTATGCTTCCAAGCAGCATTCTACTCTTGTAGAGCATATGAGAAGGCATGCTGGaacaaaaccatttaaatgcaccgtgtgtgactatgctagtgctCGCCGTTCTGCCCTTACGTTGCATATCAGAACGCATACGGGAGATAAGCCTTATAAATGCACCATGTGTGACTATGCTTGTAAGCAGCAATATGTGCTTGCATTGCATATGAAGCGGCataaataa
Protein Sequence
MDSCSLEKFMCSLCGYKFSQQRYLTNHFKLCKDADDPADKLGADINTIKKEIKSEDEIQSMELFDEDTTTEPIFDIKLEEIEFTETTISGTACPQSGQPPESLKTETSEELFTLTKDDYAIAQPTQLEENGYTPLKPYSCTTCDYTCANMSVFTVHMRKHSAETPYKCTWWMRVKIYPHLNDGWVFTGIALCAASAITDVPRDGATIAINQWSVLRQPHTATIFLRIAIEDTSENMSTFVKCEETTDSSWVEKFMCNLCGYKFRQQQDLTNHFKLCKDADDPADKLGADLITIKKEIKSEDEIQSMELFDEDTATEPIFDIKLEEIEFTETTISGTACPQSGQPPESQKTETSEELFMLTKDDYTTAQPTQLEENGYTPLKPYSCTTCDYTCANMSVFAVHMRKHSAETPYKCTRCEYSCTHQPSLEVHMSTNTGEQPFKCTMDDYASAHSALTLHMADSSENKTTIYMKCEETTNTIADSSSSGKFECSLCKLKFSQEKYLTNHFKLCIVNTLDVDIITIKKERKTKDEMHSMKLLDEQPKTEPTFDIKLEDIEITETTISGTACPQSEQPPERLKTETPEDLFTLTKVDYIPVPLEDCMKLAKLRKVYRFDIKLEDIEFTETTVSGTASPQSGQPPERLETETPEDLFTLTKVDHITVPLEECMRVAKLGKMADSSENNMTTYMQCEESMDTIADSSPFGQEKYLTNHFKLCKDVEDPVDTLDVDIITIKKELKTEDEMHCTELFDEHTITEPTFHVKLEEIEYTETTISGTACPQSGQPTEDLKTEAPEEPTQPEEHVKVDEPGKPYRCTMCDYACAYQSNLTVHMRQHTGEKPFKCAFCDYAFTVRYSLTKHMRIHTGHKPYKCTVCEFSSSHYSCLRMHRKRHTAEKTFACAACEFSATNQSELTAHIVTHREEKSFKCTVCEYAGKNQKGLTNHMKTHTGAKPFKCTVCDYACSRSFALQVHMRRHTGEKPYNCSVCDFNTTNHSAVNVHMRTHSGVKPFKCTMCEYACAHRRSLKLHMMKHTGQKPFQCTVCDYASTSRCSLTVHMRQHTEEKPFKCTVCDYASKQHSTLVEHMRRHAGTKPFKCTVCDYASARRSALTLHIRTHTGDKPYKCTMCDYACKQQYVLALHMKRHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-