Mpro021449.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melinopterus prodromus
Gene Symbol
-
Assembly
GCA_964023965.1
Location
OZ030392.1:7449151-7452277[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.00029 0.029 16.4 0.9 1 23 162 184 162 184 0.97
2 18 0.12 12 8.2 0.5 1 23 190 213 190 213 0.97
3 18 8.2e-07 8.2e-05 24.5 2.8 1 23 219 241 219 241 0.99
4 18 0.00096 0.096 14.8 4.7 1 23 247 269 247 269 0.98
5 18 0.0012 0.12 14.5 0.3 1 23 275 297 275 297 0.98
6 18 0.00027 0.027 16.6 0.6 1 23 303 325 303 325 0.98
7 18 3.2e-05 0.0032 19.5 0.6 1 23 331 353 331 353 0.99
8 18 0.00058 0.058 15.5 2.1 1 23 359 381 359 381 0.99
9 18 7.9e-05 0.0079 18.2 3.9 1 23 387 409 387 409 0.99
10 18 0.00013 0.013 17.5 1.9 1 23 415 437 415 437 0.98
11 18 0.021 2.1 10.6 5.7 1 23 441 464 441 464 0.97
12 18 2.1e-05 0.0021 20.0 2.9 1 23 470 492 470 492 0.98
13 18 0.00012 0.012 17.6 0.2 1 23 498 520 498 520 0.99
14 18 0.00019 0.019 17.0 3.3 1 23 526 548 526 548 0.99
15 18 0.0019 0.19 13.8 0.3 1 23 554 576 554 576 0.98
16 18 0.00072 0.072 15.2 1.4 1 23 582 604 582 604 0.99
17 18 0.0012 0.12 14.5 0.1 1 23 610 632 610 632 0.97
18 18 0.027 2.7 10.2 0.6 1 23 638 660 638 660 0.97

Sequence Information

Coding Sequence
ATGAGTTCAGAATGTTTCACCACAGAAAATCATCCAGAACATCAATCAAATTTGGATTGTCCGTACAATTTTCCCTTTGACGAATGGAATATTGGCTCAAAGAGTGCGCCTGTTGAGGAACTTGGAGATATTCGAGTCAAGACAGATGTTGAGGAATGGAATGTTGATCCAAAAATTGAACCGAATGCGGAGATTAGACACACTTCTATTGGTACACATCAGTTGAACTTTGATGGACTTCCATCAACATTTTTAAAGAGTTTGAATAATGAATGCATGCAGTCTGTTAACAATGACTGTAACAGTGAGCAATCTTCGTTTGATTTTAACACTGGCAACCATGATATCAACATAAAAGAAGAAGAGGACATTGAAGTTGGCGAGACAAGAGTTAAGACGGAGGTTGCTGGTAAATTGCCAATGAAAACTGAAGAGGAGGATTCCAACCTACTGAACGTAGATGCAAAATCGAGAGAGAAAAATCACGTATGTAGTGTCTGCGAATATGCAGCCGCAAGATCGCATGAACTTAAAAGGCACATGATGATACATACCGGCGACAAACCTTATAAGTGTAATTTATGTCAATACGCAGCTAGATTACCGCAGAATCTTAAATTCCATATGGCGACAACACATAACCAGGAAACAACGTACAAGTGTAATATATGCGAGTATTCAACGACACGTCCAAAACACCTTCAAGCCCATATGAAAACACATGCGCCGAAAAAGCCGTTTACTTGTACTATGTGCGAGTATGCTTGCGTACAATCTAGACACCTCAAAGTCCATGTGAGGAAACATACCGGAGAGCGGCCATATTCCTGTAATATATGTGACTTTTCAGCAGCAACCTCAGAGAAGCTTAAACTGCACACGAGAGCCCATACAGAGGAGAGACAATTTACCTGTTGTATTTGTGACTATGCTACTGCAATATCTTCAGAACTTAAAGCACATATGAGTACACATATAGGCGAGAGAAAATATAAATGTACGATGTGTAAGTATGCTGCTGCAACATCTTCAAACCTTAAAACGCACATAATGAGCCATACTGGCCAGAAACCATATAAATGTAAAACATGTAACTATGCTGGTGTAACAATGGGACACCTTAAGCGACACATTACAACGCATGCTGACAAGAAACCGTATACTTGTACCATGTGCGAGTACACTTGTGCGCAATCTAGATACCTTAGAGTTCATATGAGAAGACATACCGGAGAGGGACTGTATAATTGTACTCTGTGTGATTATAAAACTGCATCATCAGCTAATTTTAAAAGGCATATGAGTAAACACGAGAAATCGTACGAATGTGCTACGTGTGATTATAAGTGCGCAACTGCTCATTGCCTTAAAACACATATTATGAGTCGACATTCGTCTGGCAACGCACATAAGTGTACTATCTGTAGTTACGAAACTCCACGATCGTCGCAGCttaaactgcatatgagaacacattcAGGCGAGAAACCATATCAATGTACGATATGTAAATACGCTACCTCAATTCCTGCGTCCCTTAAAGTGCACATGATGAGGCATACTGGGCAGAAACCTTATACATGTAAAATGTGTGACTATGCTTGTGTAACTACGGGACGCCTTAAGAGACACCTTAGAACGCACGCGGAGAAGAAACCGTATACATGCACTCTGTGCGAGTATTCTGCCTCAGAATCTGCACTTCTCAAAGTGCATATGAGCAAGCATACAGGTCAGAAACCTTATAAATGTAAGAcctgtgattatgctagtgcagcTATGGCGCACCTTAAGAGACACGTTAGAACGCATGGGGAGAAGAAACCGTTTGCGTGTACTGTATGCGAATATACTGCTTCGGAAGCTGCACTtcttaaagtgcatatgagaaAACATAGCGGGGAAAAGCCTTATAAGTGTATTctgtgtgattatgctagtgcgtCGTCTGCCCACCTAAGGGACCATGTACAAAGACACGCTAAGAAGAAGGAAGGCAAACCTGGAAATAAGTAA
Protein Sequence
MSSECFTTENHPEHQSNLDCPYNFPFDEWNIGSKSAPVEELGDIRVKTDVEEWNVDPKIEPNAEIRHTSIGTHQLNFDGLPSTFLKSLNNECMQSVNNDCNSEQSSFDFNTGNHDINIKEEEDIEVGETRVKTEVAGKLPMKTEEEDSNLLNVDAKSREKNHVCSVCEYAAARSHELKRHMMIHTGDKPYKCNLCQYAARLPQNLKFHMATTHNQETTYKCNICEYSTTRPKHLQAHMKTHAPKKPFTCTMCEYACVQSRHLKVHVRKHTGERPYSCNICDFSAATSEKLKLHTRAHTEERQFTCCICDYATAISSELKAHMSTHIGERKYKCTMCKYAAATSSNLKTHIMSHTGQKPYKCKTCNYAGVTMGHLKRHITTHADKKPYTCTMCEYTCAQSRYLRVHMRRHTGEGLYNCTLCDYKTASSANFKRHMSKHEKSYECATCDYKCATAHCLKTHIMSRHSSGNAHKCTICSYETPRSSQLKLHMRTHSGEKPYQCTICKYATSIPASLKVHMMRHTGQKPYTCKMCDYACVTTGRLKRHLRTHAEKKPYTCTLCEYSASESALLKVHMSKHTGQKPYKCKTCDYASAAMAHLKRHVRTHGEKKPFACTVCEYTASEAALLKVHMRKHSGEKPYKCILCDYASASSAHLRDHVQRHAKKKEGKPGNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-