Mpro020633.1
Basic Information
- Insect
- Melinopterus prodromus
- Gene Symbol
- -
- Assembly
- GCA_964023965.1
- Location
- OZ030391.1:87822992-87826414[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.00014 0.014 17.5 0.8 1 23 88 110 88 110 0.98 2 21 0.0034 0.34 13.1 0.8 3 23 118 138 116 138 0.96 3 21 0.00031 0.031 16.4 1.1 1 23 154 176 154 176 0.98 4 21 0.0096 0.96 11.7 0.7 3 23 184 204 182 204 0.96 5 21 0.00039 0.039 16.0 1.1 1 23 220 242 220 242 0.98 6 21 0.027 2.7 10.2 1.0 3 23 250 270 248 270 0.96 7 21 0.0014 0.14 14.3 1.6 1 23 286 308 286 308 0.97 8 21 0.0034 0.34 13.1 0.8 3 23 316 336 314 336 0.96 9 21 0.0013 0.13 14.4 0.6 1 23 352 374 352 374 0.96 10 21 0.031 3.1 10.0 1.1 3 23 382 402 380 402 0.96 11 21 0.00031 0.031 16.4 1.1 1 23 418 440 418 440 0.98 12 21 0.038 3.8 9.8 1.3 3 23 448 468 446 468 0.96 13 21 0.00033 0.033 16.3 0.5 1 23 489 511 489 511 0.98 14 21 3.9e-05 0.0039 19.2 0.8 3 23 519 539 518 539 0.98 15 21 0.00082 0.083 15.0 0.1 1 23 545 568 545 568 0.94 16 21 1.1e-05 0.0011 21.0 1.8 1 23 585 607 585 607 0.99 17 21 9.1e-07 9.1e-05 24.3 2.4 1 23 613 635 613 635 0.97 18 21 3.1e-06 0.00031 22.6 1.2 1 23 1032 1054 1032 1054 0.98 19 21 3e-05 0.003 19.6 3.7 1 23 1060 1083 1060 1083 0.95 20 21 9.6e-05 0.0096 18.0 0.4 2 23 1090 1111 1089 1111 0.96 21 21 3.6 3.6e+02 3.6 6.0 1 23 1117 1139 1117 1139 0.97
Sequence Information
- Coding Sequence
- ATGGTTGTGGATTTCACGGAAACTACTTCCGAATCCAATCGTGCACTATCCGGTGAACCTGTAGCAATTTTGATGACGGCTGAAGAACCAACACGACTTGGAGAGCACATCACGGTACACGAAACACCAGAAAAGCCACAAAAGTCCAACAAATGTGACGCTATTCCAGCAAAACATAGatttctaaaaacaaacaagCAAATTCCCATAGGGAAGGAATCGGGCAAAGTTGCTGTCGGAAGGCGTACATTAGAAAAACCATataattgtgaaaattgtgggTTAGCTATTGTTAATAGTTCTCACCTTCGACGGCATACGCTTACGCATACAGGAGAGGAACGATTAGCTTGTAAAGAGTGTGACTTAGATTTTGCAAGTGATTGTGACCTTCGACAGCATATGCTCAAGCATACACGAGACACAGTGGCTGTTGGAAGGCGTACAGTAGGGAAACcatttaattgtgaaaattgtggcTTAGCTATTATTAATCGTTCTCACCTTCGACGGCATACGCTTACGCATACAGGAGAGGAACGATTAGCTTGTAAAGAGTGTGACTTAGATTTTGCAAGTGATTGTGACCTTAGACAGCATATGGTCAAGCATACACGAGACACAGTGGCTGTTGGAAGGCGTACAGTAGGGAAACcatttaattgtgaaaattgtggcTTACCTATTATTAATCGTTCTCACCTTCGACGGCATACGCTTACGCATACAGGAGAGGCACGATTAGCTTGTAAAGAGTGTGACTTAGATTTTGCAAGTGATTGTGACCTTCGACAGCATACGCTCAAGCATACACGAGACACAGTGGCTGTTGGAAGGCGTACAGTAGGGAAACcatttaattgtgaaaattgtggcTTACCTATTATTAATCGTTCTCACCTTCGACGGCACACGTTTACGCATACAGGAGAGGAACGATTAGCTTGTAAAGAGTGTGACTTAGATTTTGCAAGTGATTGTGACCTTCGACAGCATATGCTCAAGCATACACGAGACACAGGGGCTGTTGGAAGGCGTACAGTAGGGAAACcatttaattgtgaaaattgtggcTTAGCTATTATTAATCGTTCTCACCTTCGACGGCATACGCTTGCGCATACAGGAGAGGAACGATTAGCTTGTAAAGAGTGTTACTTAGATTTTGCAAGTGATTGTGACCTTCGACAGCATATGCTCAAGCATACACGAGACACAGGGGCTGTGGGAAGGCGTACAGTAGGGACACcatttaattgtgaaaattgtggcTTAGCTATCATTAATCGTTCTCACCTTCGACGGCATACGCTTACGCATACAGGAGAGGAACGATTAGATTGTAAAGAGTGTTACTTAGATTTTGCAAGTGATTGTGACCTTCGACAGCATATGCTCAAGCATACACGGGACAATAAGGAATCGGGAAAAGTTGGTGTCGGAAGCACTACAGtagaaaaacaatttgtttgtGAAATATGTGGCTTAGCTTTTAAAACTCCTGCTATCCTTCGACGGCATAAGCatacgcatacaggagagaaacgaGTTGATTGTAAGGAATGTGGCCGTGCTTTTGCACATCAATGGGTCCTTCGACGGCATATGATCcggcatacaggagagaaacgaTTTGATTGCGAAGTATGTGGCCAACGTTTTGCAGTTCGTTGGACCCTTCAACAGCATATAATAAACAAGCATACACGAGACAAAAACAAATCAGGAAAAGTGGCTGTTgaagagaaaccatttaagtgtaaaatatgtgactatgcttgtaGTTATCGTGCTAACCTTCGAGTGCATATCCttacgcatacaggagagaaagaATTTGATTGTAAAGAATGTGGCCGTGCTTTTGCACGTCAATGCAGCCTTCGACGGCATATGCTCACGCATACACGACCCAAAAAGAAATCGCGCAAAGTGGGTGTCGAAAGGCGTACAGTAAAGAAACGATCTAAATGTGAAATACATGATAACCTTCAACAGGCTTTGGATTTCACGGAAACTACTTCCGACTCCAGTGGTGCACTATCCGGACAACCTGTAGAAATTTTGAAGACAGCTGAACAACCAGCACGACTTGAAGAACACATCGCAGTACGCGAAACACCAGAAAAGCCACAAAAGTCGAATAACTGTGAAACTGATCCAGCAAAACATGGatttctaaaaacaaacaaacaaggaCCTATTGGGAAGGAATCAGGCAACGTGGGTGTCGAAATGTATACAATAGAGATACCGTTTAATTGTGAAATACGTGATAACCTTCAACAGGCTTTGGATTTCACGGAAACTACTTCCGACTCCAGTGGTGCACTATCCGGACAACCTGTAGAAACTTTGAAGACAGCTGAACAACCAGCACGACTTGAAGAACACATCGCAGTACGCGAAACACCAGAAAAGCCACAAAAGTCGAATAACTGTGAAACTATTCCAGCAAAACATGGatttctaaaaacaaacaaacaaggaCCTGTAGGGAAGGAACCAGGCAACGTGGGTGTCGAAATGTGTACAATAGAGAAACCGTTTAGTTGTGAAATACGTGATAACCTTCAACAGCCTTTGGATTTCACGGAAACTACTTCGGACTCCAGTGGTGCACTATCCGGACAACCTGTAGAAATTTTGAAGACAGCTGAACAACCAGCACGACTTGAAAACCACATCGCAGTACATGAAACACCAGAAAAGCCACAAAAGTCGAACAAATGTGAAACTGATCCAGCAAAACATGGatttctaaaaacaaacaaacaaggaCCCATAGGGAAGGAATCAGGCAAAGTGGATGTCGAAAAGTGTACAATAGAGGAACCGTTTAATTGTGAAATACGTGACAACCTTCGACAGCCTTTGGATTTCACGGAAACTACTTCGGACTCCAGTGGTGCACTATCCGGACAACCTGTAGAAATTGTGAAGACAGCTGAACAACCAGCACGACTTGAAGACCACATCGCAGTACATGAAACACCTGAAAAGCCACAAAAGTCCAACAAATGTGACGATCAAAGACCCATAGAGAAGGAATCGTGCAAAATGGGCGTCGAAATATCTACGGGAAAGAAATCATTTAATTGTGGAATATGTGacgtaacttttaaaacatattataacCTTCGACGGCATTTGCTtacgcatactggagagaaacgATTTGATTGTAAGGAATGTGGCTTTGCGTTTACACGTCAGTGTAGCCTTCGACGACATATGCTCAACAAGCATATGGGAGAGAAACAACTTAATTGTGTCATATGTGATTATACTAGTGCACGTCGGGATCAGTTGCAACGGCATATGCTCCGGCATGCAGAAGGGCAAGAATTCAATTGTGAACTGTGCGACTTTGTTTGTATATGTCGTAGTAAGTTTCAACAGCATATGCTCAAGCATACATGA
- Protein Sequence
- MVVDFTETTSESNRALSGEPVAILMTAEEPTRLGEHITVHETPEKPQKSNKCDAIPAKHRFLKTNKQIPIGKESGKVAVGRRTLEKPYNCENCGLAIVNSSHLRRHTLTHTGEERLACKECDLDFASDCDLRQHMLKHTRDTVAVGRRTVGKPFNCENCGLAIINRSHLRRHTLTHTGEERLACKECDLDFASDCDLRQHMVKHTRDTVAVGRRTVGKPFNCENCGLPIINRSHLRRHTLTHTGEARLACKECDLDFASDCDLRQHTLKHTRDTVAVGRRTVGKPFNCENCGLPIINRSHLRRHTFTHTGEERLACKECDLDFASDCDLRQHMLKHTRDTGAVGRRTVGKPFNCENCGLAIINRSHLRRHTLAHTGEERLACKECYLDFASDCDLRQHMLKHTRDTGAVGRRTVGTPFNCENCGLAIINRSHLRRHTLTHTGEERLDCKECYLDFASDCDLRQHMLKHTRDNKESGKVGVGSTTVEKQFVCEICGLAFKTPAILRRHKHTHTGEKRVDCKECGRAFAHQWVLRRHMIRHTGEKRFDCEVCGQRFAVRWTLQQHIINKHTRDKNKSGKVAVEEKPFKCKICDYACSYRANLRVHILTHTGEKEFDCKECGRAFARQCSLRRHMLTHTRPKKKSRKVGVERRTVKKRSKCEIHDNLQQALDFTETTSDSSGALSGQPVEILKTAEQPARLEEHIAVRETPEKPQKSNNCETDPAKHGFLKTNKQGPIGKESGNVGVEMYTIEIPFNCEIRDNLQQALDFTETTSDSSGALSGQPVETLKTAEQPARLEEHIAVRETPEKPQKSNNCETIPAKHGFLKTNKQGPVGKEPGNVGVEMCTIEKPFSCEIRDNLQQPLDFTETTSDSSGALSGQPVEILKTAEQPARLENHIAVHETPEKPQKSNKCETDPAKHGFLKTNKQGPIGKESGKVDVEKCTIEEPFNCEIRDNLRQPLDFTETTSDSSGALSGQPVEIVKTAEQPARLEDHIAVHETPEKPQKSNKCDDQRPIEKESCKMGVEISTGKKSFNCGICDVTFKTYYNLRRHLLTHTGEKRFDCKECGFAFTRQCSLRRHMLNKHMGEKQLNCVICDYTSARRDQLQRHMLRHAEGQEFNCELCDFVCICRSKFQQHMLKHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -