Mpro006582.1
Basic Information
- Insect
- Melinopterus prodromus
- Gene Symbol
- -
- Assembly
- GCA_964023965.1
- Location
- OZ030390.1:39385531-39402920[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0007 0.07 15.2 3.6 1 23 108 130 108 130 0.98 2 24 4.4e-05 0.0044 19.0 3.9 1 23 136 158 136 158 0.98 3 24 1.9e-05 0.0019 20.1 6.4 1 23 163 185 163 185 0.99 4 24 0.00047 0.047 15.8 1.7 1 23 191 214 191 214 0.96 5 24 0.2 20 7.5 0.2 1 23 219 241 219 241 0.96 6 24 0.0046 0.46 12.7 4.7 1 23 251 273 251 273 0.98 7 24 2.4e-06 0.00024 23.0 0.6 1 23 280 302 280 302 0.97 8 24 1.6e-07 1.6e-05 26.7 0.7 1 23 308 330 308 330 0.98 9 24 0.0012 0.12 14.5 0.8 2 23 372 393 371 393 0.96 10 24 0.15 15 7.9 1.3 1 23 399 423 399 423 0.96 11 24 0.64 64 5.9 2.4 1 20 429 448 429 451 0.85 12 24 6.9e-05 0.0069 18.4 1.2 1 23 457 480 457 480 0.95 13 24 0.00013 0.013 17.6 0.7 3 23 489 509 488 509 0.98 14 24 0.00052 0.052 15.7 3.3 3 23 517 537 515 537 0.96 15 24 0.019 1.9 10.8 1.1 1 13 543 555 543 557 0.92 16 24 0.035 3.5 9.9 0.1 2 23 695 716 694 716 0.92 17 24 2.8 2.8e+02 3.9 5.3 1 23 722 744 722 744 0.97 18 24 0.15 15 7.9 0.5 1 21 750 770 750 772 0.76 19 24 0.00062 0.062 15.4 2.5 1 23 778 801 778 801 0.96 20 24 0.00033 0.033 16.3 1.8 1 23 813 836 813 836 0.94 21 24 0.004 0.4 12.9 1.0 3 23 847 867 846 867 0.99 22 24 9.4e-06 0.00094 21.1 1.3 1 23 873 895 873 895 0.96 23 24 2e-06 0.0002 23.2 0.4 1 23 901 923 901 923 0.98 24 24 0.2 20 7.5 0.1 1 21 929 949 929 950 0.94
Sequence Information
- Coding Sequence
- ATGCCAGCTAATACCGCTGCTTTAgattttcaatcaaaattgGACTATATGATGATGTCTGATGGAAAGTCTGATCTGTCGGATAATAATCTCCTGGAAACTGCTGTGGCCCAATTAAAtgcttcagattcagattttcTAACCTTATTAGCTGCCGAAGACGATATTTTAAGAGATATAGCTAGCAGTGAACAACTTGAAGAATTAATCAACAGCCAAGCAGATCTCATTGGGTCGAACATCAATGAATTTATGGAAGTAAATTATAAAGGAATTGCTGTCCAAGAAGAAGTGAAAGAAGATAATGTAGCTAAACAAGCATTTAAATGTAATTACTGTGATAAAGTTTGCTCTACTAGGAAAATATTAAAGAGTCATTTAATGATTCACAGCGGTATTAGGCCATATTCGTGTGACATTTGTAATAAAACGTTTAGACATAATTACGAGATTAAAGTCCATAAGCGTAGTCATAACAAGCCTTCATTTCAGTGTGATATGTGTTCTAAGATGTTCATACATAAGTCTCACTTGACAGCACATAAAAGAAAACATGTGGGCGATTTTGCGTTTACCTGTCAGGAGTGTAATAAAGGATTTATATCTCAATCAAGTTATGACCATCATGTTAAATTAGTTCACGAAGGAACTAAACACATTTGCGAGGTATGCGGTTCAAAGTTAGGTACGATATCGGCTCTGAACGAACACAAACTTACTCACGATCCCGCTTATAGAAAGGAGCGTTTTCATGTTTGCGAATACTGTGGAAAGAAGTACTTAAGCGGGAGGCACTTGCGCAGTCACATGAAAACTCACACCGACACTAGTAACAATTTTGCTTGTCATATTTGCGGTAAAGTTTTGTCAACAAAGTCAGGCTTGCGAAAACATCTAGAAATACACTTTGACCGTAAAACCTTTTCTTGTGAACAGTGCGGTAAAAGCTTCAGTTCGAAGAATAACTTATCTGCACATATGGTAACTCATTCCCAAGAAAAGCCATTTAGGATTATCAAACAGGAGACGGCAGTACACGAGGAGTCGGTATTTGTTACCAGTGTAAATTATGCTAACGACCatcaaaaatcaagaaaacttACACCATTGATCTACtgcaaaaattgcaataaacGATTTAAAACAAATCTGCAGTACTTGCTTCATATCGCCGTTCACAGCGAATCGAAAGAGTTTAGGTGCGACAAGTGCGATTACAAAGCCAGATTTGAAGCAAGGAGAAATTTTGAGATTCATATGCGCAATCACGAGAGAAAGGATACCTTCAAATGCCAAGTTTGTCATCAAGGATTCCCTACGCAAAACCAAGCTGATGAACATAAGTTCTTCCATAGCGGCGAAACTCCGTTTCAGTGCGATATGTGTGAAAAGAGCTTTACGTACTCAAAACAGTTGAGTACGCACAAAGCTATTGAGCATGTGGAATCTCTAAGGGATCTATTGTGTGATTTTTGCGGAAAGAAGTTTAACTCGAATGGAAAGCTTGTTATACACCGTAGAATTCATACTGGTGAAAAACCTCATCTTTGTAGCCACTGTCCTAAAGCGTTTACCAATAAAGTAAGGTTAAAAGAACACGAACGTGTACACACTGGGGAACGTCCATATAAGTGTAAATTCTGTGGGAAAGCGTTTTCACAAAGCGTCGGGGGCGCGGCGCTGCGGTCAACTTTGCGGTGCGCTAGAGGTCGTAAGGGTACGGATACACTACTTGCGACGCTGATAGCAGTGCTGATAGCGGCGCTGGTAGCGGAGCGTTTGAATACACAGGTGCTTACGGATATGAACATACAGTCAGCGGCGCTTCGAGCTGTGCTGCTAGCGGTGCTGCTGCCggACGACAAGGAAACCATTTTTGTGGAAAAATCCATGTGGATTAGTGTTGATCCTGCTATGGTGACGGGAGTATTTGAGAATTATTACGAGGAGTCACCGGAATCACAAAGACACAATGACAATGGCAGAACATCTTCATCTGAAGACTCTGAAGATCTTTTATCCCGCCTAAGAAagcagaaaataagaaaaagacTGCAAAAGAAGGTTTCTACAGAAGCTATAATGTGTGAGATGTGTGATCGGACATTCGAGAATAATGTTGAATTTGGTTTACACAGCATCTCGCATAGCACTGATAACCGGTACCATTGTCACATGTGTAAGTTTAAAAGCAACTCGAAATACAGCATTGGCACGCACATTAGGGCACACGATGGGACAACAAAGTACAAGTGCGAGATTTGCAATAAAGGGTTCGCTATAAGCACTCGTGCTATAGAGCACAAAAATTTTCACACTGGAGAGAAGCCTTTTCAGTGTGAGATTTGCGGAAAGCATTTCATGTTCTCATGGTTCTTGACGTCGCATAGACGCGCTCAACATTGGGAAATTATGACCGGCATGCCATTGGTTAAATACGACTGTACCACATGTAATAAACACTATACCTCAGCGACTGGTCTGAAGAGACATCAAGCTAACATTCATAATGCTGGCAGGACAGAATCTGCAGTTTTGTGTGATATCTGTGGGAAAAGTCTTGCTAGTAAGGAAAAGTTGAAGTTTCATAGGAGGACTCATACCGGCTTTAAGCCACACGCGTGCAGCACGTGTCCGAAAGCATTTACAAGGAAAGAACAGTTGAAGGAACACGAACGAGTTCATACTGGAGAGAAGCCTTATATATGCAAATATTGTGGGAAAGGATTTACCCAAAGAAGTCCTCTAAGAATTCACGAACGCATCCACACTGGAGAGCGGCCATACATTTGTAGACTGTGCTCTAAGGGTTTTATATCCAAAGGCGTGATGGATACACACATGAAGAGTTGCCAGGGGCTACCTCACCCTTAA
- Protein Sequence
- MPANTAALDFQSKLDYMMMSDGKSDLSDNNLLETAVAQLNASDSDFLTLLAAEDDILRDIASSEQLEELINSQADLIGSNINEFMEVNYKGIAVQEEVKEDNVAKQAFKCNYCDKVCSTRKILKSHLMIHSGIRPYSCDICNKTFRHNYEIKVHKRSHNKPSFQCDMCSKMFIHKSHLTAHKRKHVGDFAFTCQECNKGFISQSSYDHHVKLVHEGTKHICEVCGSKLGTISALNEHKLTHDPAYRKERFHVCEYCGKKYLSGRHLRSHMKTHTDTSNNFACHICGKVLSTKSGLRKHLEIHFDRKTFSCEQCGKSFSSKNNLSAHMVTHSQEKPFRIIKQETAVHEESVFVTSVNYANDHQKSRKLTPLIYCKNCNKRFKTNLQYLLHIAVHSESKEFRCDKCDYKARFEARRNFEIHMRNHERKDTFKCQVCHQGFPTQNQADEHKFFHSGETPFQCDMCEKSFTYSKQLSTHKAIEHVESLRDLLCDFCGKKFNSNGKLVIHRRIHTGEKPHLCSHCPKAFTNKVRLKEHERVHTGERPYKCKFCGKAFSQSVGGAALRSTLRCARGRKGTDTLLATLIAVLIAALVAERLNTQVLTDMNIQSAALRAVLLAVLLPDDKETIFVEKSMWISVDPAMVTGVFENYYEESPESQRHNDNGRTSSSEDSEDLLSRLRKQKIRKRLQKKVSTEAIMCEMCDRTFENNVEFGLHSISHSTDNRYHCHMCKFKSNSKYSIGTHIRAHDGTTKYKCEICNKGFAISTRAIEHKNFHTGEKPFQCEICGKHFMFSWFLTSHRRAQHWEIMTGMPLVKYDCTTCNKHYTSATGLKRHQANIHNAGRTESAVLCDICGKSLASKEKLKFHRRTHTGFKPHACSTCPKAFTRKEQLKEHERVHTGEKPYICKYCGKGFTQRSPLRIHERIHTGERPYICRLCSKGFISKGVMDTHMKSCQGLPHP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -