Basic Information

Insect: Melinopterus prodromus
Gene Symbol: -
Assembly: GCA_964023965.1
Location: OZ030393.1:12679013-12685736[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.00045 0.045 15.8 0.2 1 23 160 182 160 182 0.98

2 24 0.0002 0.02 16.9 0.5 2 23 189 210 189 210 0.98

3 24 1.5e-05 0.0015 20.5 0.3 1 23 216 238 216 238 0.99

4 24 8.2e-05 0.0082 18.2 1.8 1 23 245 267 245 267 0.98

5 24 4.9e-06 0.00049 22.0 0.6 1 23 273 295 273 295 0.98

6 24 0.00013 0.013 17.6 0.7 1 23 301 323 301 323 0.98

7 24 6.2e-08 6.2e-06 28.0 0.7 1 23 329 352 329 352 0.98

8 24 0.059 5.9 9.2 2.7 1 23 358 380 358 380 0.96

9 24 4.3e-07 4.3e-05 25.3 0.5 1 23 389 411 389 411 0.98

10 24 6.6e-06 0.00066 21.6 0.8 1 23 417 439 417 439 0.98

11 24 0.0005 0.05 15.7 0.5 3 23 447 467 446 467 0.99

12 24 1e-06 0.0001 24.2 1.1 1 21 473 493 473 494 0.95

13 24 0.0011 0.11 14.6 0.5 1 23 610 632 610 632 0.97

14 24 0.0045 0.45 12.7 0.3 3 23 640 660 639 660 0.97

15 24 0.00027 0.027 16.5 2.7 1 23 666 688 666 688 0.99

16 24 0.00017 0.017 17.2 1.5 1 23 695 717 695 717 0.98

17 24 4.5e-05 0.0045 19.0 2.2 1 23 723 745 723 745 0.99

18 24 3e-06 0.0003 22.7 1.0 1 23 751 773 751 773 0.99

19 24 8.5e-06 0.00085 21.3 0.2 1 23 779 802 779 802 0.98

20 24 1.4e-05 0.0014 20.5 0.8 1 23 808 830 808 830 0.98

21 24 1.2e-05 0.0012 20.8 0.2 2 23 840 861 839 861 0.96

22 24 3.4e-06 0.00034 22.5 0.9 1 23 867 889 867 889 0.99

23 24 3.5e-05 0.0035 19.4 0.5 3 23 897 917 895 917 0.98

24 24 5.5e-06 0.00055 21.9 1.9 1 23 923 945 923 945 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.00045	0.045	15.8	0.2	1	23	160	182	160	182	0.98
2	24	0.0002	0.02	16.9	0.5	2	23	189	210	189	210	0.98
3	24	1.5e-05	0.0015	20.5	0.3	1	23	216	238	216	238	0.99
4	24	8.2e-05	0.0082	18.2	1.8	1	23	245	267	245	267	0.98
5	24	4.9e-06	0.00049	22.0	0.6	1	23	273	295	273	295	0.98
6	24	0.00013	0.013	17.6	0.7	1	23	301	323	301	323	0.98
7	24	6.2e-08	6.2e-06	28.0	0.7	1	23	329	352	329	352	0.98
8	24	0.059	5.9	9.2	2.7	1	23	358	380	358	380	0.96
9	24	4.3e-07	4.3e-05	25.3	0.5	1	23	389	411	389	411	0.98
10	24	6.6e-06	0.00066	21.6	0.8	1	23	417	439	417	439	0.98
11	24	0.0005	0.05	15.7	0.5	3	23	447	467	446	467	0.99
12	24	1e-06	0.0001	24.2	1.1	1	21	473	493	473	494	0.95
13	24	0.0011	0.11	14.6	0.5	1	23	610	632	610	632	0.97
14	24	0.0045	0.45	12.7	0.3	3	23	640	660	639	660	0.97
15	24	0.00027	0.027	16.5	2.7	1	23	666	688	666	688	0.99
16	24	0.00017	0.017	17.2	1.5	1	23	695	717	695	717	0.98
17	24	4.5e-05	0.0045	19.0	2.2	1	23	723	745	723	745	0.99
18	24	3e-06	0.0003	22.7	1.0	1	23	751	773	751	773	0.99
19	24	8.5e-06	0.00085	21.3	0.2	1	23	779	802	779	802	0.98
20	24	1.4e-05	0.0014	20.5	0.8	1	23	808	830	808	830	0.98
21	24	1.2e-05	0.0012	20.8	0.2	2	23	840	861	839	861	0.96
22	24	3.4e-06	0.00034	22.5	0.9	1	23	867	889	867	889	0.99
23	24	3.5e-05	0.0035	19.4	0.5	3	23	897	917	895	917	0.98
24	24	5.5e-06	0.00055	21.9	1.9	1	23	923	945	923	945	0.97

Sequence Information

Coding Sequence: ATGGAAATAAGCACGGATATAAACTTTGAAACATTATGTCGCGTCTGCATAAAACGAACATCAGACTTGCGCGATTTATTTGGAGGAAAATTAGCCGATATGCTTAGAGAAATTGCCCAGATCTCGGTTGACCAAGCGGATGGACTTCCACAGCAGATATGCGATCAATGCATACGTGAGTTAAGTCGATATTACTACTTCAGAAAGATAATTATTCAGAGTGACATAGATTTACGAGCAATTTTACATGATCGTACTTATAAAGACAACATCTTACGTGATCTTGCAGTTGATATGATAGAGAAAAATAGCGATAACGACGTATGCAATCTTGGAGATGACGTGAAGGACAAGAGTAACGACGACAACTTATGTGGTGGTGTTGATATCGATCAAAATAATGTGAAAGAAGAGGAGAATATACAGGAACTGTCGGAAGCTAACAATGCAGTAGATTCAGAGAAATGTGATAGCACGTTTGTATGTAGAGTATGCAAAAAGGAGTTGAATGATTTGCCTGCTTTGAAGCGTCATATGAAGATTCATACTGATATTAATCCACGGCAGTGTGAAATATGCAAAAAAGTGTTGAGGAATCTGCCGGCGTGGAAACGTCATATGAAGACTCATTCGAGTATTAAATCGTTCAAGTGTACCGTGTGCTCCGCGGCTTTTAGAGATGGAGGAAATTTGACTAAGCACATGAAGATACATAATGTCGAAGAGAAAAAGTATCACTGCACAGAATGTGAACTACGATTTGTTGGGAGGAACCAACTGACTATTCATATGAGAActcatacaggcgagaaaccatataACTGCGGTCTTTGCTCACGGTCTTTCCGCACACCTGCAAATATGAATATTCATATGAAgACTCACACACTCGAGCGTCCGTTCACCTGCGACGTATGCCAGAAATCGTTCCCTTACATCGCCTCTCTAAAGTCCCACAAGCTAACCCATACGGGAGAAAAATCGTACGTGTGCCAAGAATGCAACAAATCCTTCGCGCAGAAATCGCAGCTCACCGTCCACATCCGAAGGCTACACACTCTGGATCGTCCGTTCATGTGCACCGAATGCGGCAAGAGGTTCTTGTTGAAATGTGAACTGGATAACCACACGCGAGAACATACCGGAGAAAAGAAACCACGTCGGTTTTCCTGCCCCCAATGCGAGAAAAAGTTTGCCACATCTTCCGAGCTGAAAGATCACATGAATGTCCACACGAAAGATCAGCAGTACCAATGCGATATTTGCGGGAAAAAATACCGGCGTCGGTCGGGTTTGGCGATGCACAAGAAGTGGCATACCGGGGAGAGGAAACACGGCTGTCAGTACTGCGGGAAAGCTTTTACGATGTCTCAGATCTTGAAGAAACACCTGAGGATTCATACCGGCGAGAGGCCTTATTGCTGCGAAGTTTGCGGAAAGAGTTTTGCACAGAAGAGCACACTTACCACGCATATGAAGGTTGACCAAACTGATGGACTACCACAGCAGATATGCGATCAATGTACACATGAGATAAGTCAATATTACTCGTTCAGAATGATAATTATACGAAGCGACAGCGATTTACGAGGAATCCTAAACAACCGTAAGAGTAACGACAACGCCCTATGCGATCTTGAACTCGATGTTAAAGACAAAAATATTGCCGACAACTTGTGTGATCTTGTAGTTGATGTCAAAGAAGAAAATAAGAACAACGACTTCAGCAATCTTGTTGATACCACTCAAGTTCGTGTAAAAGAGGAGAATAAAGACGAATTGCAGGAACTTAATTCTGCGGTAGATTTAGAGAAATGTGATAACAAGTTTGCATGTAAAGTATGCAAAAAGGTGTTAAATAATTTGAATGCGCTGAGACAACATACGAAAATTCATACGGATATTAATCCACGCCCTTGTGAAATATGCAACAAAGTGATGAAGAATCTACTAGCGTGGAAACGTCATATGAAGACTCATACGACTAATAAACCGTTCAAGTGTAGTGTGTGCTTGGCCACTTTTAAACGTGGAGGAAATTTGCATAAGCACATGAAGTCTCATAATAACCAGGAGAAAAAGTTTCACTGCACTGAATGTGAATCAGAATTTGTTGGGAAATACGAATTGACTAGACATATGAGAAttcatacaggcgagaaaccgtACAGTTGTACTGTTTGCTCACGGCCTTTCAGCACACCTGCTAACTTGAAATGTCATATGAAGACACACACTCGCGAGCGCACCTTCACCTGCGACATATGCCAGAAGTCATACCGCTACATTGCCTCACTGAAGATCCACATGCGGACTCACACAGGCAGGAAATCGTATGTCTGCCAAGAATGCAACAAATCCTTCATCGTGAAATCGCTACTCGATATCCACATCCGAAGAGAACACACTTTAGAGCGTCCGTTCATGTGCACCGAATGCGGCAAGAGTTTCTTCGTGAAACCCCAATTGGATAACCATATGCGCCAGCATACCGGTGAGAGGAGACCGCTACGGGTTACCTGCTCGCAATGCGACAAGAAATTTGCCTCCCCTTCGGAGCTAAAAGTACACTTGTACGTCCACACAGAGGAACGGCCATACCAATGCGATGTATGCGGGAAAAATTACAGACGGCAAGGGGCTTTAACGAGCCACAAGAAGTCACACACCGGGGAGAAGAAGTACGGTTGTCAGTACTGCGGGAAAGCTTTTAAGGAGTCCAAGGTCTTGAAAATACACCTGAGAACACATACCGGCGAAAGGCCTCATAGTTGCCAAGTATGCGGAAACAGTTTTGCCCAGAAGAGCACACTTACTACGCATATGAAGGTTCACAGTAGTGTTGTTAGTTAA
Protein Sequence: MEISTDINFETLCRVCIKRTSDLRDLFGGKLADMLREIAQISVDQADGLPQQICDQCIRELSRYYYFRKIIIQSDIDLRAILHDRTYKDNILRDLAVDMIEKNSDNDVCNLGDDVKDKSNDDNLCGGVDIDQNNVKEEENIQELSEANNAVDSEKCDSTFVCRVCKKELNDLPALKRHMKIHTDINPRQCEICKKVLRNLPAWKRHMKTHSSIKSFKCTVCSAAFRDGGNLTKHMKIHNVEEKKYHCTECELRFVGRNQLTIHMRTHTGEKPYNCGLCSRSFRTPANMNIHMKTHTLERPFTCDVCQKSFPYIASLKSHKLTHTGEKSYVCQECNKSFAQKSQLTVHIRRLHTLDRPFMCTECGKRFLLKCELDNHTREHTGEKKPRRFSCPQCEKKFATSSELKDHMNVHTKDQQYQCDICGKKYRRRSGLAMHKKWHTGERKHGCQYCGKAFTMSQILKKHLRIHTGERPYCCEVCGKSFAQKSTLTTHMKVDQTDGLPQQICDQCTHEISQYYSFRMIIIRSDSDLRGILNNRKSNDNALCDLELDVKDKNIADNLCDLVVDVKEENKNNDFSNLVDTTQVRVKEENKDELQELNSAVDLEKCDNKFACKVCKKVLNNLNALRQHTKIHTDINPRPCEICNKVMKNLLAWKRHMKTHTTNKPFKCSVCLATFKRGGNLHKHMKSHNNQEKKFHCTECESEFVGKYELTRHMRIHTGEKPYSCTVCSRPFSTPANLKCHMKTHTRERTFTCDICQKSYRYIASLKIHMRTHTGRKSYVCQECNKSFIVKSLLDIHIRREHTLERPFMCTECGKSFFVKPQLDNHMRQHTGERRPLRVTCSQCDKKFASPSELKVHLYVHTEERPYQCDVCGKNYRRQGALTSHKKSHTGEKKYGCQYCGKAFKESKVLKIHLRTHTGERPHSCQVCGNSFAQKSTLTTHMKVHSSVVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -