Basic Information

Gene Symbol
ncor1
Assembly
GCA_964023965.1
Location
OZ030395.1:1072564-1090170[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-08 5.6e-05 24.8 0.0 4 43 486 525 484 527 0.98

Sequence Information

Coding Sequence
ATGTTCTTGCTTGCCAATGGTCTCACAATGCAAAACCTCACCGTGCAGCAGGACCTCTATAAGCCGGTCCGGTCACCGCTGCCGCCAGCGCCGCAGCCTCAGTCTCGCTACCCCTTCCCGAGCGGCGTCAACAGTTCGGCAGGCGGAGGCGGCGCTGCAGTCGCCTCACTCCAACCTCAACCGCCGCCCACCGCCTCGCAGCTGCCTCAAAATCTCGGACACCAGCTCGCCGTCGCTGCCGCCGCCGGCCAACGATACAACATCGCCGCTAGCGTCGCCGCCCAGGCGCCACCCATCCCCACCACTTACCGCGACTACCGACACCCGAATCGGATCTCCCTGCTGCCTCCCGAGTACGGAGCGGGCGGCGGTGGGAGAGGAATGGGCGGAGGCGGGGGTCAGAGGGGGGACGTTTTGCTACAGGGTGGGGCGCAGATCGCGCTCGCCCCGCAGCAGCAGGGGCAGCTGCATAGGGCGGAGGCGGTCGCCTCGCCGAACCACCACCAGGTGCAGCTGTCGCAGCAGCAGCAGTTGGGACAGCAGCCGTTTAAGAAGATCCGGCTGCAGGACCACAAGGAGTTGCAGCCGCTGAGGATAGATACTAGgGAACAGCCGGGAACGTACAATCCTCAGGTGGAAGCGATCTCTCCGACGATACCGGACCACATCCAGCAGGAGGACCAGCAGTTCCGCGCGACGAAGGACGAACTCCTGCAGCAGATCAGCAAGGTCGATCGGCAGATATCGAAGACTGAGTCGGAGATTCGCGAGCTGCGCGAGAAACAGAAGGAACTCGAGGAGTCCGCGCTGAAACCCGCGGCGAAGTCAGAGGTCGAGGAGGAGGCGCAACCGAAGCACCAGAGCCTCGCGCAGAAGATCTACGCAGACAATAGGAAAAAATCGCAGATGGCGCACGCAAAACTGGACAATCTTGGACCTAAGGTCGACTGGCCGTTATACAATCAACCATCGGACTGTTCCGTCTACCACGAGAACAAACGGAGACACACAGGTTTCTCGCGACGACTGCAAGAGCACTTCAAGAAGCGACACGCGGAAAAACAGCGAAGGGACTCGAACGTCATCGAGACCTACAGCAAGATGATGCAGGAGTGGCACCGGAAGGTGGAAAAGACGGAAGCGAGCTCGAAACGGAAGACGAAGGAGCTGAAGAACCGCGAATTCTTCGAGCGCGTCTTCCCCGAGCTGCGGAAACAGCGGGAGGACAAAGAGAGGTTTAACCGTGTCGGTTCTCGTATCAAATCCGAAGCGGACATGGAGGAGATCATGGACAACCTCCAGGAGCAAGTTGTCGAGGAGAAGAAAATGCGCAGCTACGCGGTTATTCCGCCGCTGATGCTGGACGCACGCGAACGAAAACTCGTCTACCAGAACAACAACGGCTGCGTCGAGGACATGGCCGCCGTCCACAAGAACCTGCAGTACCTCAACATCTGGACGCAGCCCGAGAAAGACCTCTTCAAGGAGAAATACCTCCAACACCCGAAGAACTTCAACCTAATCGCCTCCTTCCTAGAGAAGAAATCGGTGTCCGACTGCGTCCAGTACTACTATCTAAGCAAGAAAACCGAAAACTACAAACAGCTATTGAAGCGATCGAGGCAGAGGACGAGACAGCGGCTACCCAAGCAAAACCCGCCCGTCGGCGTAGAAAACATGGCCTCGGGGGTCGTCACGAGGCACCAGAAGGAACAGCAACTAAAAACGCAGCAGAACTACGAACCTTCCGCGGAAACGACAACCCCTTCGACGAATACCACCaccacgacgacgacgacgacagtaTCTGCGGCGACGCCTACGCAGAGTTTGGTCTTTTCCGGAGCGAGTTCTACGACGATAACCGTTCTAACGACTTCTCCGGCGAAGATTACGATAAAATCGGAGGTGGAAGCCGATGATAAATCGCAGGCTTCCGACGAGAATGTCGTCATTGAGTTCAAGCAGAAGATCGAGGTCGAGCAGAGTACGACGGCTGCTAACGGGGAGATTAAGATGTCTGCGGACGAGGCCGAGGTGGTCGCCGAGGAGGTGTTCGTGAAGAAAGAAGAGGTCGTCGTTGTGAAAACTGAGGCCGAGACGCCTGTGGAGAATCATTCGGGAAGTGAACAAAGCTTCACCGCGAATTCAGTAGTCgagaacaagaagaagaaggacAGGAGAAAAGACGTCGACAACGCTCAGGTTGAAACCAGCGACGATGAGACTACTGACCTCCACGCTTACTCATGGCGTCATGCTAGAGAGCGCCAGAAATACGATATTAGGAGAAGATTGATTAATTTTTAG
Protein Sequence
MFLLANGLTMQNLTVQQDLYKPVRSPLPPAPQPQSRYPFPSGVNSSAGGGGAAVASLQPQPPPTASQLPQNLGHQLAVAAAAGQRYNIAASVAAQAPPIPTTYRDYRHPNRISLLPPEYGAGGGGRGMGGGGGQRGDVLLQGGAQIALAPQQQGQLHRAEAVASPNHHQVQLSQQQQLGQQPFKKIRLQDHKELQPLRIDTREQPGTYNPQVEAISPTIPDHIQQEDQQFRATKDELLQQISKVDRQISKTESEIRELREKQKELEESALKPAAKSEVEEEAQPKHQSLAQKIYADNRKKSQMAHAKLDNLGPKVDWPLYNQPSDCSVYHENKRRHTGFSRRLQEHFKKRHAEKQRRDSNVIETYSKMMQEWHRKVEKTEASSKRKTKELKNREFFERVFPELRKQREDKERFNRVGSRIKSEADMEEIMDNLQEQVVEEKKMRSYAVIPPLMLDARERKLVYQNNNGCVEDMAAVHKNLQYLNIWTQPEKDLFKEKYLQHPKNFNLIASFLEKKSVSDCVQYYYLSKKTENYKQLLKRSRQRTRQRLPKQNPPVGVENMASGVVTRHQKEQQLKTQQNYEPSAETTTPSTNTTTTTTTTTVSAATPTQSLVFSGASSTTITVLTTSPAKITIKSEVEADDKSQASDENVVIEFKQKIEVEQSTTAANGEIKMSADEAEVVAEEVFVKKEEVVVVKTEAETPVENHSGSEQSFTANSVVENKKKKDRRKDVDNAQVETSDDETTDLHAYSWRHARERQKYDIRRRLINF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00136810; iTF_00137888;
90% Identity
iTF_00137888;
80% Identity
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