Mpro042016.1
Basic Information
- Insect
- Melinopterus prodromus
- Gene Symbol
- -
- Assembly
- GCA_964023965.1
- Location
- OZ030395.1:35583706-35584587[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-09 4.7e-06 27.9 0.0 1 40 18 57 18 59 0.93
Sequence Information
- Coding Sequence
- ATGGCACGGAATTATAAGAAGAAACCTGGATCTCGTAACTATAAGAATTATACCGAGGGTCAATTGGAAGAAGCTCTCCAGAGGATTACAAATGGAGAATTAAAGATGAGGACTGCATCCCGTCAATACAACATTCCGTTTGGtacattaaacaataaatttcgtGGTCGACATATTCGTAACGCTGGTGGACAGTCCGCAATGAGTGTTGAAGAAGAAATTGCCCTCATAAATGCAGCTTCCAAATGCGCGGATTGGGGGTACCCTCTGAACGTACTCGATTTAAGAATGCTCGCAAAAGCGTATTTGGGCAGGTGTGGACGCATACTACCCCAATCTACTAATAACATCCCAGGAAAGGATTGGGCATTGTCTCGTCTAGCCAGACACAAAACACAAGTTACTCAAAGGTTATCCAGCAACACCAATAAATGCTGTGGAGCAGTATCCAGGGAAACTCTAGAAACATACTTTGCAAACTTAGAACAAACGTTGGAAGGCATAACTGATAAGAATATTTTTAACTACGACGAGACTAACGGCGGGGATGATCCTGAGAAAGCTCGTGCTATATATCGAAGGGGTGTCAAATATCCAGAGAAGATTGTAAACcactcaaaaagcaatacaacaATAATGGTTTGCGGGTCCGCAAATGGAACACTGTTACCACCCTACGTAATTTACAAAAGTGAATATTTGTATAATACCTGGAAGGAGGGTGGCATTCGAGGCAAACCCTGTTGCGACCAACCCTGTTGTATTAAAGGATGCCGATTTAACAGAACCTCTCATGGATGGATGGATACCAACACATTTCAGGATTGGTTTGAAACCTGTTTTATGCCACATGCAAGACGTCTAGAAGGACAAAAGTATTGA
- Protein Sequence
- MARNYKKKPGSRNYKNYTEGQLEEALQRITNGELKMRTASRQYNIPFGTLNNKFRGRHIRNAGGQSAMSVEEEIALINAASKCADWGYPLNVLDLRMLAKAYLGRCGRILPQSTNNIPGKDWALSRLARHKTQVTQRLSSNTNKCCGAVSRETLETYFANLEQTLEGITDKNIFNYDETNGGDDPEKARAIYRRGVKYPEKIVNHSKSNTTIMVCGSANGTLLPPYVIYKSEYLYNTWKEGGIRGKPCCDQPCCIKGCRFNRTSHGWMDTNTFQDWFETCFMPHARRLEGQKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00137862;
- 90% Identity
- iTF_00137862;
- 80% Identity
- -