Mpro002969.1
Basic Information
- Insect
- Melinopterus prodromus
- Gene Symbol
- -
- Assembly
- GCA_964023965.1
- Location
- CAXIES010000464.1:56942-58622[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-09 3.4e-06 28.3 0.0 3 40 17 54 15 57 0.87
Sequence Information
- Coding Sequence
- ATGGTGAGAACATATAAGAAGAAAACAAACCGGGGCAACATTTCATCTGACGTTTTTGAGCAAGCAGCTAATGCAGTGTTACAAGATAACCTGTCAATCAGAAATGCTGCTAGTAGATACGGGATTAATTTTATGACCTTCCATCGATATATGAAAAAACGCAAATCGTTACCGGATAATACAGCAATATCTGTTGGCTATGCTAAACCTTCACTTATTTTTACTCAGCTACAGGAAAAGCAGTTATCCCAATATGTTGAAGATTGTTCAAAACTATATTATGGCTTAACTACAAAAGATCTAAGAAGACTAGCTTATGAATTAGCTGTCGCAAACCACAACAAATTTTGCAAATCATGGAATACCTGTCAAATGGCATCTAAAGACTGGCTAATGGGTTTTTTGAAGCGGCATCCACATTTGTCAGTTCGTACTCCAGAATCGACAAGTCTGTCAAGAGCTACTGCTTTCAACCGTGCTAATGTAAACTTATTTTTCGACAACCTAAGTTCAGTgtatgaaaaatataattttgagccAAATGATGTCTGCAATGTTGATGAAACTGGACTTACCACGGTACAGAAACCGCCCAAGATAATCGCAAAACGTGGAGCCAAGCAGGTTGGGGCCATAACATCCGGTGAGAGGGGGATATTAGTAACTATGGCCTTAGCTGTAAACGCTACCGGTAATTTCATGCCACCGATGTTAATATTTCCTAGAAAGAAAGTTAAGGCATCAGCTCACCCATCTGGTTGGATGacttcagaaatttttttactatttatccaacattttatcaaatttacCCGATGCAGTAAAGAAAAGCCCGTTTTACTAATCCTGGATAACCATGTATCACATTTATCTATTCCCGTTCTGAACTGTTGCAAAGATAACGGCGTAGTTCTTTTGAGCTTTCCACCTCACACCTCCCACCGCCTTCAACCTTTAGATAGAACTGTTTATGGTCCTCTCAAGAGATACTTTAACGTTAATGCAGACAGATGGCTTAAAACACACCCGGGAGTACCTATGAGCATTTATGACATCCCAACAGTTCTTAAGGACGCTCTGCCACTAGCTGCAACAACGAGCAATATTCAGAAGGGATTTGTAGTCTCAGGTATTTGGCCGTACGACCGGAATATTTTCCCAGACGAGGAATTTCTTCCTTCTGAAGTTACTAACAGAGCTTTTAATACTGGGGAATGTGATAACAACAGAACACCCCAACCTTCTACATCCACAGCTTACACTTGTAGCGATCAACTGACAATTATTGTTTCGCCGGAAGAAATAAAACCTTTTCCTAAAGCACCGCCACGAAAACAAATTGTTCGTCGCAAAAAACGGAAATCTGCAATTCTGACAGACACCCCAACTAAAAACGCTCTAGAAGAAGAGGAACGACAAAGAAAAGGACGCAAGGATAAAActggaaaacaaaaaaagaaattaatgcagaataaaagtaaaattaataagAAGAGAAACAGGGAAGAAGTGAATTCTGACCAGTCCGAAGATGACGCTTGCGATTAA
- Protein Sequence
- MVRTYKKKTNRGNISSDVFEQAANAVLQDNLSIRNAASRYGINFMTFHRYMKKRKSLPDNTAISVGYAKPSLIFTQLQEKQLSQYVEDCSKLYYGLTTKDLRRLAYELAVANHNKFCKSWNTCQMASKDWLMGFLKRHPHLSVRTPESTSLSRATAFNRANVNLFFDNLSSVYEKYNFEPNDVCNVDETGLTTVQKPPKIIAKRGAKQVGAITSGERGILVTMALAVNATGNFMPPMLIFPRKKVKASAHPSGWMTSEIFLLFIQHFIKFTRCSKEKPVLLILDNHVSHLSIPVLNCCKDNGVVLLSFPPHTSHRLQPLDRTVYGPLKRYFNVNADRWLKTHPGVPMSIYDIPTVLKDALPLAATTSNIQKGFVVSGIWPYDRNIFPDEEFLPSEVTNRAFNTGECDNNRTPQPSTSTAYTCSDQLTIIVSPEEIKPFPKAPPRKQIVRRKKRKSAILTDTPTKNALEEEERQRKGRKDKTGKQKKKLMQNKSKINKKRNREEVNSDQSEDDACD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980900; iTF_00980899;
- 90% Identity
- iTF_00980900; iTF_00980899;
- 80% Identity
- -