Mpro015070.1
Basic Information
- Insect
- Melinopterus prodromus
- Gene Symbol
- -
- Assembly
- GCA_964023965.1
- Location
- OZ030391.1:31348898-31349444[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-09 4.1e-06 28.0 0.0 3 44 20 61 18 62 0.94 2 2 7.6 4.6e+03 -0.9 0.0 32 44 124 136 122 137 0.85
Sequence Information
- Coding Sequence
- ATGCCTAATAAGTATGTTCGAAAGAGAAATGTAGCTCCAAGAAGCACTTGGGATGCGGATGACTTACATCTAGCAATGACTGCGGTAACATGTGGTGAAATGAGTCTAAATGAAGCGTCTCTGTCTTATCATATACCCAAAATGACATTAAGGCGAAGAATAGCAACTAAAAACTTTGCGAAAACGGATCGTCTGGGCCCCGATGGCTCTCTGGGTAAAGCTACGGAGGAAAAGCTGGCCAGACATATAAAGAAACTACAAAACCATGGATTTGCGCCTACAAGATCTGAAGTACGAATCATGGCGTTTAATCTGGCAGAGTTGATGGGAATTAGGCATAAATTCAAGAACGGTAAGGCCGGAAGAGTGTCGTTGCAGTCATTTTTGCGAAGAAATACAGACCTCAGTGTTCGTAAAGCGGAAAACACCTCTGTAGCCCGGGCGGGCCATAGGGATATCTACGGAAACGGTGCACGAGTACTTTAA
- Protein Sequence
- MPNKYVRKRNVAPRSTWDADDLHLAMTAVTCGEMSLNEASLSYHIPKMTLRRRIATKNFAKTDRLGPDGSLGKATEEKLARHIKKLQNHGFAPTRSEVRIMAFNLAELMGIRHKFKNGKAGRVSLQSFLRRNTDLSVRKAENTSVARAGHRDIYGNGARVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -