Basic Information

Gene Symbol
JARID2
Assembly
GCA_964023965.1
Location
OZ030390.1:96892657-96905061[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-22 2e-18 68.2 0.0 6 89 1470 1551 1466 1551 0.93

Sequence Information

Coding Sequence
ATGGTAGTAAACCGAGGCGAAATGAAGCGCAAACGTAAGGAAGACAATTGTATAAATCTCATAGATCACAGCCCAAAAAGAACAAAAGTACAAGCTCAACGTAAGTTTGCGCAGGGTTCGAACGTAAGCAGCCCTGTTATAACTCCAATTAAAGAGATTGAGACGCAAGAACGTAGAGATGTGTTACCAGAACCTATTGAATTATTACCGATGAAACGTCCAAACACCGAGGACTTTCTCACGTTTCTATGCTTTCGAGGGACACCAATTCTACCGCCAAACTTAAATTTCTTTAATAGTGCGACCATGGTTGATTCTCCACCTGAAGATCCCAAGGAAACGAAGAACGGACCGATCATGACAGGTCCCATCGGAAACAGTCCAAACGAACGACCGTTTGTAGCCTTTGGGGTTCGTAAACGTGCAGATCCTGTAGTTATAAGCAAACAGATGGATAAAAAACGGAGACATGCTCTAGCGCTGCAGACGTTACGTAGGAAATATCAAGAACAAAAAATGGCGAAAATACGTGCAATTGCTGTAAGTAAAATTTCCGAAAAGGTAACCAGTAGTAAAACGATAGTTCGAACGCGATCTATAAGCAAAACGGAAACGGTAACTAAGAAAGACGTTGCACAAAAGACTAAAGTAAAAGTTAAAGTTGTAGCGACTAAACGAATCGCTAGACGTACCATAAAACAACCAATTCgaacaaatattaatattaatcctAATATTAACTCAAAAATGTGCTTGCGGAGCTTCCGCGGACGATATATTCATCGCGAGTTACAAGGCAGGGGTAAAAAGCAACCAAAACCTAGTAAAAGACGAGTACTGAGAAGAATTGAAGATACTAACGATGATACGCAAGAAATTTCTGAATTTTCATCAGATGATGATGAACCTTTGGTTAAAAAAGCAAAACTTAAAAAACCGGCAGGTAAAATTGTCAAGAAACCCTTGGAATCGACAAAGAAACAAGAGAATCTCAGGCTGACTAGATCGCAACGATTACTAGCTAGCACTAGAAAACACAGTTATAAAACTGTTATTACAAGACTGAGCACAATTCGGTCAACGCgattaggtaataaaaagattgTTCAGTCGGCTGTTTTGAGAAATACCAGAAGAACCatagaaacaattaaaaaaactgcCAAGAAAGTAGTTTCTGAAACAAAATCAGCTCTTGTAGAAAACACGGAGAACTACACAAATAAGAAAGTTGAGAGTAACGAAAGCAAAGAAAACGATATTAAAACTAGGAGTAAAACCGAAAAAGgttcaaaaattatcgaaaaGAAATTAGTGAAGTCGACTAATAATAAAAGGGAACCAGCTCTGGTTGTTAAGAAAGCTCCAAAAGTGCCAGATCCGCCAAAAAAAGTTGTTAAGTTGTTGAAGccgaaaatagaaataaataaaaaaaatctaaaaccaAGCCCAGTTATCAAGAAAAAACTTCCAATGAAAATAGCGCCAAAAAATAAATCCAATCAAAAAAATGATGAAACAAAATCACTAGAACCAAAAGTTAAAACTCAAAGCGCAACTAAGAAGGATGTTGAcaagaaaacaattgaacagtCCAAAAAAGTTCCAGAGCAATCCAAGAAGACACCTGTTGAGCCACCAAAAAAGGCAGAACAGCCAAAAAAGCCACCTCAAGAGCAATCGAAAAAGCTTCCAACAGAACAGCCAAAAAAGGCTCCAGAACAACCAAAAAAGCTTCCAGAACAATCAAAAAAGGCTCCGGAACAGCCAAAAAAAGCTCCAGAACTGCCAAAAAAGGCTCCAGAACAGCCAAAAAAGACTCCAGAACAGCCAAAAAAGGCTCCAGAACAGCCAAAAAAGCTTCCTGAACAGCCAAAAAAGCCTGCGGAACAACCCAAAAAACCAACAGGCGATCAGCCGAAAAAGATTTCTGAACCACCTAAAAAGCCAAACAAAGAAGACAAAATAAAGGAGAAACCCACGAAAGAAAAACAAGAACTGAAAAAGaatgagaaaattgaagataaAGTGACCGAAACAAAAGAAGATGATGTTAAATGTTGTCCATCCAGACCAAGTAGGAAAACTAAGGAAGCAGCTACTTTATACATGGAGCTTTTGGGTCACAAGCTAGTCAATGATGCGGAAATGGATGAGGATAATATTTCCATAGATAGTTTTCCCGAATTGCCGAACGTTAGGAAAACAGAACAGAGggaaattgaattaaaagctAAAGCAAAATTTAAAGAAACTGATAATAAAACTAAGCCGAATGAAGCAAAGAAATCAGAAAATGAATCTAAGAAAAATGTAGGCGATAATCagaattttgaaattaaagattTAAGTAATAAGAAGATGGCACCAAATAAAAAATTGGATGCAGAAAATCAACCGGAATTAGATGTGGTTAAGAAACTTGTGCCGAATAAAGAAATTATCAAACCCGTGGAAACTAAAATTGAAACAATAACTATCGATGTTGTCGATGGTAAACCAAAAGAACCACTGAAAGAAGAAATAAAAGCTCCAAGTAAAGTAGAAGATAAAAAGGTGACGCTCAAAGCTAAAGTGGAAAAGAAAGTTCTGAAGACTGAAGAAAAACCGGTCCCAAAAGAGAAACCAATTCTTCCTGAAAAAGTGGAGGAAATTGTGCCAAAACCAATCCAAGAAATAGAGACTAAACGCATACAAAATAAGCCCAATAAACCAGACTCCAAAATAGAAACATTTGATGATTCCTTGTCCGAATCATCAAACGACCTAAAACCGAAAAACAAGAAACTAAAGAATCTAAAAAAGAAACCGAAATTTGATCAAAGCTTTAGTGATTCCGACGAAGAACCACTATcaaatttaaccaaattaaaagaaaaaagcaGCGATAAGGACAAGAAAATCGAGAAGAATCCAGAAGAAACTAATCCGAAAGCGGAAGTCCAATACAAAGGAAAGCCTAAGCGGGAATGCACAAAACGACCGCAAAACTATTTGCCTCTGTATTCGTCATCTTCGGACGAAGAAAAGTTCTTCCACGGATTCCTAAAATCAGAAGCCAAACCGGTCAAAGAAATCATAATAGAACCAGAAAAATGCACGCATTCAGTCCCATCCTTGGACCTATCCTGTAAGGACGTCAGCAGGCGATTTGGTAAGGGAAAAGTGAACATGTCCAACGAGCAAATCGAGAAGTGGTTGAACGATTCCGCGATGGCCACCAGTCGTAACTTAAAAAAGGAGGAAGAGGAACTGATTAAGTTTGAGGAGAAGATTGATATTTCCAGCACGCCGGAGAAGCCGAAAATCGAGACTGTGACAAAATCGGAAATAGTTAGTCAGCAGGATGAAGTTTCTAGCGCTTCGAATCAAACGCCGGAGAAGTCTTCGCCACTGCAATCCTTGAAGGTGACTCCAAATGAGAGAAAACCGATATTTAAGAAGAAGGCTGAACCGATCAAGAATGTGAATGCTTTCTCCGCGAACAACGAGAGCAGTGTTTATGCTTTTGAAGCTGAAGAGGACTCATCTGTTAGCACTCCGTTTAGAAGACCTTCAAGGAGACCGTCGAGTACTGCGACTTCCAAGTCGGAGGATGAGATTTCAAAACATGAGGAGCTCTCAAAAAATGCAGGTCGATTTAGACTACCATCGATGTTGAAGACCGACCAAAAACTCCCGATAAAACCAGAATTTCCTCTAAATTTATCCACGGAAGATTCCACAAGCACGAGTTTTCCCGTCCAAGCAAATGATCTCCTAACGGATAATTCCAACTCCGAGTGCCCCATGGAGACCGATGACGCTGACCAAAACTTCTTCAAAGCGTCCGcaaccattccaataaaaatccCCGCAAACGATTCTagtcaaaaaacaaaaatcgggCAGGCCGTTCTGATTAGAGACGACAAAAGCTCGATTATGTTTCCGCCAATGCAGTCGCTGCAAAAAACCAAGCTGGATACAAAAACGTTCCTAAAACAATCGACTAGCAGGCATTGCGATCGAAGTTCGGAAACTTCCGAcgatttcaaatataaaattccgAGTTCGCCAAGCGCAAGTTCGTCTTCCAGCGCGAAATTATATAAGAGACCTCAGGTGAAGAATCGTAATAAGAATGTTGAGGTTTGTAACCCGGTGAATGTAACGGAATTCCCGAGCGGCCAAATGCCCGCCCAGATGGTGGAAGCTCCAGTTTTTCATCCGACCGATAAAGAATTCCAAGATCCGTTGGAATACATCGAAAAGATCCGACCGAAAGCTGAGAAATTCGGGATATGCCGGATTGTTCCGCCCGCTAACTTCAAACCGGAATGCAAAGTTGCGGATGATATGAGATTTACCGCTTATAATCAGTACGTGAATAAGATGCTGCATAGGTGGGGGCCAAATTTTAAGGAGTTGATGGCCATAAGGAAGTATTTGAGGACGCAGAATATTTCTTTGAATCAGCCGCCTTTTATCGGTGGGATGGAGATTGATCTTCCGAGGTTGTATCAAACTGTTCAGTCGTTGGGAGGTTTGAAGGAGGTTATCGAGAAGAAGAAGTGGCCCAAGGTTTCCGAGGCTATGAAAATCCCGAAGTCGGCGCAAGATCGGATGACGAAATTGGACGATTTCTATTGTAAATATCTACTGCCCTACGATACTCTCTCACCAGCTGAGCGTGAAAAATTATTTGACGAAGTGGAGACAGAATGGGCGAAGCGGGAATCGAAAATGTTATCAAAGATTCAGACGACAAGCGATTTGAACAAATCAGAAATTGCCAGTACCGAGTCGGAATCGGAATCCGACGATGAGGTTGACGAGTGCATCGTGAAAGGCCGAAATGTAGCTCTCAATGCGTTCTATAGGATAGCTCGTAACACCATGAGTATGTATTTCAAGACTACGGAACCACCGGCCGAAGAGGTTGAGCAGGAATTTTGGAAACATGTCACCCTGAAGAACAATCACATATGCGTCCATTCGGGTTCTATCGACTCGGGAAGTTGGGGATATGGATTTGCCGTTTCCAAAAACAGTCCGTTCGCGAGGCATGCGTGGAATTTGAAAGTTTTGACGAATAATAGCGGCTCGGTTTTGCGATATATGGGACCTATAATGGGCGTTACAGTACCAACACTACACGTCGGAATGGTCTTCAGCGGCTGCTGTTGGTACAGGGACCCGCACAGCCTCCCGTGGATAGAATACCTGCACACCGGCGCCAACAAAATATGGTACGGAATCCCCGATTCGATGAGCGAGAAATTCCACCAAACTCTCCTAAAAATAGTCCCGAATTACTGCCGAAACAAATCGATATGGCTTCCGTCGGATACCGTAATGATCCCGCCGAATCTACTAGTCGAGAACGGTGTCTCCCTCTGCAGGACCGTACAGGAACCAGGCCATTTCGTCATCGTATTTCCAAAAGTTTTCACGTCCAGTCTGTGCACTGGATACGTCGTCTCGGAGAGCGTTTACTTTGCGTCTTCGTATTGGCTGGAGGGCGCTCAAAATGTTTTCGACGAGTTGCGGCAGAATTGCGAACCGTCGATGTTTTCTTTGGATCGTCTCCTGTTGAGTATTACAATGGATCAGAGGTCGAGCGTGGATATCTTGAAGCAGATTATACCGACGGTTCAGAAAATTTGCGATCGCGAGAAAGAGTTGAGGAGTAAATTGAGGACTCTGGGGTTGTGCTTGATCGAGAAATTGCCGATGCCCGAGTCGCCCGCTGTGCGGAAACGGAAGAAGTTGCAGTCGGATGGTGGTGATTACGAGTGCGAAGTTTGTAGGGCGAATTTGTTTATATCTTTGGTATCCGAAACACAAGATGACGTAGTTTATTGTCTACAGCACGCGATAGAAAGCATCGAGAACAAACGTTTAGACGTGAAGAATTGCAAATTGATGTTCACATATAGCGACGAAGAACTCGAAGGGTTGGTTTCCAAAATTAACAGAACCATCGATGCAAAACTTCAAAAGAAGATTGTTGGCAAGTCATTATCAATGGTTGTTTATAATAAGTAA
Protein Sequence
MVVNRGEMKRKRKEDNCINLIDHSPKRTKVQAQRKFAQGSNVSSPVITPIKEIETQERRDVLPEPIELLPMKRPNTEDFLTFLCFRGTPILPPNLNFFNSATMVDSPPEDPKETKNGPIMTGPIGNSPNERPFVAFGVRKRADPVVISKQMDKKRRHALALQTLRRKYQEQKMAKIRAIAVSKISEKVTSSKTIVRTRSISKTETVTKKDVAQKTKVKVKVVATKRIARRTIKQPIRTNININPNINSKMCLRSFRGRYIHRELQGRGKKQPKPSKRRVLRRIEDTNDDTQEISEFSSDDDEPLVKKAKLKKPAGKIVKKPLESTKKQENLRLTRSQRLLASTRKHSYKTVITRLSTIRSTRLGNKKIVQSAVLRNTRRTIETIKKTAKKVVSETKSALVENTENYTNKKVESNESKENDIKTRSKTEKGSKIIEKKLVKSTNNKREPALVVKKAPKVPDPPKKVVKLLKPKIEINKKNLKPSPVIKKKLPMKIAPKNKSNQKNDETKSLEPKVKTQSATKKDVDKKTIEQSKKVPEQSKKTPVEPPKKAEQPKKPPQEQSKKLPTEQPKKAPEQPKKLPEQSKKAPEQPKKAPELPKKAPEQPKKTPEQPKKAPEQPKKLPEQPKKPAEQPKKPTGDQPKKISEPPKKPNKEDKIKEKPTKEKQELKKNEKIEDKVTETKEDDVKCCPSRPSRKTKEAATLYMELLGHKLVNDAEMDEDNISIDSFPELPNVRKTEQREIELKAKAKFKETDNKTKPNEAKKSENESKKNVGDNQNFEIKDLSNKKMAPNKKLDAENQPELDVVKKLVPNKEIIKPVETKIETITIDVVDGKPKEPLKEEIKAPSKVEDKKVTLKAKVEKKVLKTEEKPVPKEKPILPEKVEEIVPKPIQEIETKRIQNKPNKPDSKIETFDDSLSESSNDLKPKNKKLKNLKKKPKFDQSFSDSDEEPLSNLTKLKEKSSDKDKKIEKNPEETNPKAEVQYKGKPKRECTKRPQNYLPLYSSSSDEEKFFHGFLKSEAKPVKEIIIEPEKCTHSVPSLDLSCKDVSRRFGKGKVNMSNEQIEKWLNDSAMATSRNLKKEEEELIKFEEKIDISSTPEKPKIETVTKSEIVSQQDEVSSASNQTPEKSSPLQSLKVTPNERKPIFKKKAEPIKNVNAFSANNESSVYAFEAEEDSSVSTPFRRPSRRPSSTATSKSEDEISKHEELSKNAGRFRLPSMLKTDQKLPIKPEFPLNLSTEDSTSTSFPVQANDLLTDNSNSECPMETDDADQNFFKASATIPIKIPANDSSQKTKIGQAVLIRDDKSSIMFPPMQSLQKTKLDTKTFLKQSTSRHCDRSSETSDDFKYKIPSSPSASSSSSAKLYKRPQVKNRNKNVEVCNPVNVTEFPSGQMPAQMVEAPVFHPTDKEFQDPLEYIEKIRPKAEKFGICRIVPPANFKPECKVADDMRFTAYNQYVNKMLHRWGPNFKELMAIRKYLRTQNISLNQPPFIGGMEIDLPRLYQTVQSLGGLKEVIEKKKWPKVSEAMKIPKSAQDRMTKLDDFYCKYLLPYDTLSPAEREKLFDEVETEWAKRESKMLSKIQTTSDLNKSEIASTESESESDDEVDECIVKGRNVALNAFYRIARNTMSMYFKTTEPPAEEVEQEFWKHVTLKNNHICVHSGSIDSGSWGYGFAVSKNSPFARHAWNLKVLTNNSGSVLRYMGPIMGVTVPTLHVGMVFSGCCWYRDPHSLPWIEYLHTGANKIWYGIPDSMSEKFHQTLLKIVPNYCRNKSIWLPSDTVMIPPNLLVENGVSLCRTVQEPGHFVIVFPKVFTSSLCTGYVVSESVYFASSYWLEGAQNVFDELRQNCEPSMFSLDRLLLSITMDQRSSVDILKQIIPTVQKICDREKELRSKLRTLGLCLIEKLPMPESPAVRKRKKLQSDGGDYECEVCRANLFISLVSETQDDVVYCLQHAIESIENKRLDVKNCKLMFTYSDEELEGLVSKINRTIDAKLQKKIVGKSLSMVVYNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00137686;
90% Identity
iTF_00137686;
80% Identity
-