Basic Information

Gene Symbol
Kdm5
Assembly
GCA_964023965.1
Location
OZ030399.1:13001411-13008524[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-24 1.6e-20 74.9 0.0 2 89 100 183 99 183 0.95

Sequence Information

Coding Sequence
ATGGCAGCCAAGGAGGATAAACGTGTGGAGACAACCAACGGTGACAGCTCTCCCGTCAAAAATGCTCCATTCGAATTTATTGTACCACCCGAGGCACCCGTCTTTTGCCCTACTGAAATCGAATTTGCAGATCCCTTGGGTTACATAGACAAGATCAGGGGGGTTGCTGAACAATGCGgcatatgtaaaataaaaccccCACCGAACTGGCAACCTCCATTTGCTGTAGATGTGGACAAACTGAAATTTACACCAAGGGTACAGAGACTGAATGAACTAGAGGCAAAAACAAGAATAAAGCTTAATTTTTTGGatcaaattgcaaaattttgggAACTTCAGGGTTCGTCACTGAAGATCCCTATGGTAGAAAAACGCGCTTTAGATTTATATACACTGCATAGGCTAGTAAACAGTGAAGGTGGTTTCAATGGGGTAACAAAGGATAGAAAATGGTCGAAGATTTCTGCATTTATGGGTTATCCTCAAGGCAAAAGTATAGGTACGATATTAAAGACACACTACGAGAGATTATTGTTCCCCTATGATATATTCTCTGAAGGAAAATCGCTAAAATCAATTAAAAAAGATCTTCCAGACGACCCAAAATTAGAAAATGATGATGAGGAATACAAGCCGCATAGAATTGAAAGTCGGATGCTAATGACAAAGAAAGCCGGCTGCAGACGACGCGAAAAGAAGATGATCGAACCAGACTTGAAGCCGAAAACCGAGCAATTAAAGATAAAAGAAGAACTTATCGATGAGAGCGAGAGTGAACACAACAAAGAGTTAAAACGGCTACAAATATACGGAGCAGGCCCCAAAATGGCTGGTTACAACCTGGATAAAAAAGATGAGAAAACCAGAGGGAAACTATTGAACTTCGATATGGATTTTGATCCACTAGCAAAATACGTCTGCCATAACTGCAATCGCGGAGACTCGGAGGAGCACATGCTGTTGTGTGACGGGTGTGACGACAGCTACCACACCTTCTGCCTCATGCCCCCATTGGTCGAGATTCCAAAAGGCGATTGGTGCTGCCCCAAATGCGTTGCCGAGGAAGTCTCGAAACCCATGGAAGCATTCGGCTTCGAACAAGCTCAACGCGAGTACAATTTGCAACAGTTTGGTGAGATGGCAGACCAGTTTAAGTCCGATTATTTCAACATGCCTGTCCATCTTGTGCCAACATCAGTAGTCGAAAAGGAATTCTGGAGGATAGTCTCGTCGATAGATGAAGACGTAACTGTCGAATACGGGGCTGATCTTCACACGATGGATCACGGTTCTGGATTCCCGACAAAGAACTCCCTAAATTTGCTTCCTGGTGATCAAGAATACGCATATTCTGGCTGGAACTTGAACAACCTGCCTGTTCTGGAAGGTTCTGTTCTGGGATACATAAACGCGGATATCTCGGGAATGAAGGTACCTTGGATGTACGTCGGAATGTGCTTTGCAACCTTCTGCTGGCATAACGAAGACCACTGGAGCTATTCGATAAATTACCTGCATTGGGGAGAGCCGAAAACATGGTACGGGGTTCCCGGATCGAAAGCAGAAATGTTCGAAGCGACCATGAAGTCTGCAGCGCCAGAACTTTTCCAATCTCAACCCGATCTCCTGCATCAACTAGTCACTATTATGAATCCGAATATTTTGATGAATGCTGGGGTTCCCGTTTATCGAACTGATCAGCACGCTGGGGAGTTTGTGGTTACTTTTCCGAGGGCATATCACGCTGGGTTCAACCAAGGGTACAACTTTGCCGAAGCTGTTAATTTTGCACCTGCAGATTGGGTTGCTATGGGCCGAGAATGCGTGCTGCACTACTCACAACTGAGGAGGTTCTGCGTCTTTTCACACGACGAACTTGTTTGCAAAATGGCAGCCAATCCCGATAAATTGGATATCACTGTCGCCGCAGCTACCTATCAGGACATGTTGCGTATGGTTGAGACTGAGAAGAAATTACGGAAGAGTTTATTGGATTGGggtgttacaaatgCGGAACGAGAGGCATTCGAATTACTACCAGACGACGAACGTCAATGCGACGTCTGCAAAACGACGTGTTTTATGTCGGCGATATCGTGCTCTTGCAACGGTAACGTGATAGTATGTCTCCGCCATTATTCGGAATTGTGCAAATGTTCTCCAAAGAATAGGACTTTAAGGTACCGCTACACGCTCGACGAACTGCTGCCTCTGCTCAGGAACCTGAAGACTAAGGCCGAATCTTTCGATAGGTGGGCTGATAAAGTAAAAGACGCTTTAGACAGGAATACGCCGAAAAGTATGCACCTAGCAGAACTGAAGACTTTATATCAAGACGCGCAAGGGAAGCACTTTCCTAGATCAGATCTAAATTTGACATTAGCCAATGCTATCGAGGATGCAGAAAAATGTGCTAGCGTCATCAGACAGTTGGATTTAAATAAGATACGCACAAGGAATTCCTACGATAGCAAAAGTAAGCTGACGTTAGAGGAGCTTATATTGTTTTGCGACGAAATTGATAGTTTGGCGTGCGTCTTGGATGAGGAGAAAATAATCAAGGAATTGTTGAGCAAGACGTTGGAGTTCGAAAAAGAGAGTAAACGTATCTTAACCTTGCCTTTGAAGGAGTGTTTGGTGCAAGAGGTAGAAGACTTGGTGAATAGTAGTGGAGACTTATGTATCGAATTACCATCGTTACACACCATGCAAGATAGACTGAAACAATTGAAGTGGGTGCGGGAAGTCCAGACCACCAGAAGATCTGGAGACGTGGCCGATATAGAAACCCTCAAGAAACTGGTGCAATCCGGATCGTTATTACCGTCCGAAAAAACGATCGATAATGTGTTAATGGAGATCCAAGGGCTTATAAACGAGGCAGAAGAATGGGAACAAAGGGCTAAAGAGTTGCTGAAAAGAACAGGGTCGGATATCGTTCCACAAGCTGAGCAACTCATCAAAGAGGCTAGTGATATCGAAGTATTTCTTCCATCGGAAAACATCCTCATAGACAGCTTAAACAGCGCAAACGAGTGGTTTAAGCAACTCCAAGAGATCAATTCCCTTGAATTTTACCCATACCTAAGTTCGGTCGAGGAGCTAATAAAGAAAAGTCGGGCTTTCCAATTCCAATTAGAAGAAGTCGAGAAATTAAAGACGTTCGTGTTATCGAGTTTAGCGTGGAAGGACAAAACTAGTCGAATATTCCTAAGAAAGAATTCCACGTACACCTTAATGGATGCCTTATCCCCAAAAGTACAGATTGCTACTTCCAAACGCAGGCGGAAGGACGAAGAAGAAAGCATCAGATTACTCCACAATATGGACCCCACAGGCGTCGTGGCCGCGTTCAAAGAAGCTGAGGAAAAAGAAATGTCCAGCATAAGAACCTTACGCGAGACAAACCTAGCTAAAAACGTCGAAAACCCAGACAATGTCTTCTGCTTGTGCCAGAAGGGATCCTTTGGGCTCATGATGGCCTGCGACTTGTGCAAAGACTGGTTCCACTCAGCTTGCGTTCAACTACCAAAAATAGCAACCACAAAAGTCAAAGGAAGCCTAACCACAACAATACTTCAAATGGGCTACAAAGAATGCAAATTTTTATGCCCGCAATGCTTGCGGACGAGACGCCCAAAACTCGAATCAATCCTAACCTTATTGATGTCCCTACAAAAACTTCACACCCGTCTACCCGAAGGTGAAGCTCTTCAGTGCTTAACCGAAAGAGCAATGAACTGGCAAGATCGTGCGAGACAAGCTTTACAAACTGATGAATTGGAAGTGGTTTGGACCAAAATTAACACCCTCAGCCAGAAGTATTCAGAGGCAGCAGCCAGGATAAAGACCGAGAAAATTATCAGCATGGAACTGAAGAAGGCAGCTAATAATCCGGAGCTTCAACAACGTGTGCAGGAGATCACGCCGTTGAGTGGGATCAATCCTGAGGATCAGGATTGTCTCAGTCCGAGGACTAGCATTGCTTCCGAGGATAGCAGCAAGGAGGACTCTGATAACTGCAGGGATGAACATGCATACTCTATGCACATCGCAAGACATGAGCCTGACTGGACCGTTCAGATAAGCAGTACCATTCGGGAGCATTTGGAAGATCTCATGATGGAAGGTGACCTACTCGAAGTTTCCTTGGAGGAAGATTACCAACTCTGGCAGCTGATCATCGCCTGTAGAGATCCAGACAAGGATAACATTCTGGTTGACTTGgatatgGCTTTGAAAAATACACAACTAAGGAAGGCACGCAAAAGGAGATCAGAAGAGATCGACACATCGAAGAATGGAAAATTGAAGATAGATTTGGTGAAGAAGTTGAAAACCCGAAGGAGTAATGCAAAAGAGGTTGGTAAAGGACCTGAGAAGACGAGAATTCGAGGTAGACGTGGCAGAAGGCGGCAAGAGAACTCTGACGACGAAGACTTGGAGGAACGTTGTGCCGTGGACTCATGTTTGCAGCCATCGGGCGAAGAGGTGGTACAGTGGGTACAGTGCGATGGTGGTTGTGACTTGTGGTTCCACATGGCGTGCGTAGGTTTGTCGATAAAAGATATAAACGAAGACGAGGACTACATATGCATGGCGTGTTCGCCAGGTACTGTGAAGAACGGTCTAGTGAGCCTAGAACAATTAAACTTGGACAGTGATTTTAGTTTTGAGGGGTCGCAAGCTTCCTTAGCGGAGAACGTGAGTTAA
Protein Sequence
MAAKEDKRVETTNGDSSPVKNAPFEFIVPPEAPVFCPTEIEFADPLGYIDKIRGVAEQCGICKIKPPPNWQPPFAVDVDKLKFTPRVQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRLVNSEGGFNGVTKDRKWSKISAFMGYPQGKSIGTILKTHYERLLFPYDIFSEGKSLKSIKKDLPDDPKLENDDEEYKPHRIESRMLMTKKAGCRRREKKMIEPDLKPKTEQLKIKEELIDESESEHNKELKRLQIYGAGPKMAGYNLDKKDEKTRGKLLNFDMDFDPLAKYVCHNCNRGDSEEHMLLCDGCDDSYHTFCLMPPLVEIPKGDWCCPKCVAEEVSKPMEAFGFEQAQREYNLQQFGEMADQFKSDYFNMPVHLVPTSVVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKNSLNLLPGDQEYAYSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAEMFEATMKSAAPELFQSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWVAMGRECVLHYSQLRRFCVFSHDELVCKMAANPDKLDITVAAATYQDMLRMVETEKKLRKSLLDWGVTNAEREAFELLPDDERQCDVCKTTCFMSAISCSCNGNVIVCLRHYSELCKCSPKNRTLRYRYTLDELLPLLRNLKTKAESFDRWADKVKDALDRNTPKSMHLAELKTLYQDAQGKHFPRSDLNLTLANAIEDAEKCASVIRQLDLNKIRTRNSYDSKSKLTLEELILFCDEIDSLACVLDEEKIIKELLSKTLEFEKESKRILTLPLKECLVQEVEDLVNSSGDLCIELPSLHTMQDRLKQLKWVREVQTTRRSGDVADIETLKKLVQSGSLLPSEKTIDNVLMEIQGLINEAEEWEQRAKELLKRTGSDIVPQAEQLIKEASDIEVFLPSENILIDSLNSANEWFKQLQEINSLEFYPYLSSVEELIKKSRAFQFQLEEVEKLKTFVLSSLAWKDKTSRIFLRKNSTYTLMDALSPKVQIATSKRRRKDEEESIRLLHNMDPTGVVAAFKEAEEKEMSSIRTLRETNLAKNVENPDNVFCLCQKGSFGLMMACDLCKDWFHSACVQLPKIATTKVKGSLTTTILQMGYKECKFLCPQCLRTRRPKLESILTLLMSLQKLHTRLPEGEALQCLTERAMNWQDRARQALQTDELEVVWTKINTLSQKYSEAAARIKTEKIISMELKKAANNPELQQRVQEITPLSGINPEDQDCLSPRTSIASEDSSKEDSDNCRDEHAYSMHIARHEPDWTVQISSTIREHLEDLMMEGDLLEVSLEEDYQLWQLIIACRDPDKDNILVDLDMALKNTQLRKARKRRSEEIDTSKNGKLKIDLVKKLKTRRSNAKEVGKGPEKTRIRGRRGRRRQENSDDEDLEERCAVDSCLQPSGEEVVQWVQCDGGCDLWFHMACVGLSIKDINEDEDYICMACSPGTVKNGLVSLEQLNLDSDFSFEGSQASLAENVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00136610;
90% Identity
iTF_00136610;
80% Identity
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