Basic Information

Gene Symbol
Xbp1
Assembly
GCA_964023965.1
Location
OZ030392.1:7224722-7229411[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.6e-16 1.6e-12 48.9 17.2 2 64 44 106 44 107 0.96

Sequence Information

Coding Sequence
ATGAGTGTCTCCGTGCCAgcgattttgaaatatttaaataacagCAACAGTTTCAATATCATGGGTGATTGTGAAAATAGCGATAGCCAGACCAGGGCTAAGAAACGCAGACTAGATCATCTGACATGGGAAGAAAAGATACAGAGGAAGAAACTGAAAAATCGCGTGGCCGCACAGACATCCAGGGACAGGAAGAAAGCTAAGATGGAGCAGATGGAGCAGGCTATAAAAGAACTGTACGATAAGAATGAACAGCTGATCACCGAGTGTGAACAGTTGGAAGAGTTGAACGATAAGTTGACGGCGGAGAACCAAAGCTTGCACAGCCAGCTGCGCGTTCCCTGCCCGAACTGCTCTCAAAGTCGTTCTGTTGAGTGTGGTGTCCAGAATAGTTCCACAGTAACGCACCCTCAGCCGAAGGGTCTGGACAGACACTCAGCAGCCACTTTGGGCCAGCAGAAGGGCACGGCGCTGCAGAAGATTGTGTTGGCCTGCCTTCTCTACCAGATCTTCTCGACGAGCTCAACAAGGAAGTCGACCTTTCCTCTCTTGAAGAGATCACACAAAGCCTTCTCCAGGATATCGCCGCAGACCTGGAAGCTTCTGCTCAGAAGGCAAATTGCCAAGAATCATCAAATACTCCAGAGGAAGGACAACTGGTGGGGCAAGCACCAGAACTGTTGGAATCCGATAGCAGCGAATGCATAA
Protein Sequence
MSVSVPAILKYLNNSNSFNIMGDCENSDSQTRAKKRRLDHLTWEEKIQRKKLKNRVAAQTSRDRKKAKMEQMEQAIKELYDKNEQLITECEQLEELNDKLTAENQSLHSQLRVPCPNCSQSRSVECGVQNSSTVTHPQPKGLDRHSAATLGQQKGTALQKIVLACLLYQIFSTSSTRKSTFPLLKRSHKAFSRISPQTWKLLLRRQIAKNHQILQRKDNWWGKHQNCWNPIAANA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00137640;
90% Identity
iTF_00137640;
80% Identity
-