Most031281.1
Basic Information
- Insect
- Melikaiella ostensackeni
- Gene Symbol
- -
- Assembly
- GCA_032362435.1
- Location
- JAUMHM010000085.1:4953421-4974022[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 2.1e-05 0.0068 19.0 1.6 1 23 155 178 155 178 0.97 2 16 0.12 40 7.1 0.1 2 23 289 311 288 311 0.88 3 16 0.7 2.3e+02 4.8 4.9 1 23 340 363 340 363 0.94 4 16 0.00058 0.19 14.5 0.3 2 23 399 421 398 421 0.90 5 16 0.013 4.3 10.2 1.2 1 23 490 513 490 513 0.96 6 16 0.015 4.8 10.0 2.1 1 23 791 813 791 813 0.98 7 16 0.03 9.6 9.1 0.7 5 20 905 920 903 922 0.91 8 16 0.0067 2.2 11.1 0.6 1 23 1070 1092 1070 1092 0.98 9 16 0.16 54 6.7 0.7 6 23 1103 1120 1103 1121 0.95 10 16 1.9 6.3e+02 3.4 0.8 2 19 1126 1143 1125 1145 0.90 11 16 0.39 1.3e+02 5.6 2.0 1 23 1188 1211 1188 1211 0.94 12 16 3.6 1.2e+03 2.5 0.3 2 10 1215 1223 1215 1235 0.78 13 16 0.011 3.6 10.4 1.8 1 21 1240 1260 1240 1263 0.86 14 16 3.8 1.2e+03 2.5 6.5 2 23 1269 1289 1269 1289 0.95 15 16 0.0011 0.35 13.6 5.1 2 23 1294 1316 1293 1316 0.93 16 16 0.0013 0.43 13.3 0.4 2 19 1324 1341 1323 1343 0.96
Sequence Information
- Coding Sequence
- ATGAACGAAATAACACCACAAGTTTTTGCGAGTGCCTCGAATTCGGAAGTGAACACCGTCCTCGCCACTACATGCGAGGAAGCAGTTACCATCAAGCAAGAACTCGAATACATCAACGATGAAAATTTCGTAGTCCAGTCTACAGAATCAGTGATCAGTGATATCAGGGAGAACAACGCAAACATGCTTTCTTCTATCAAAGAAAGCTTCGGTATAAAAGACTGCTTCATTCGCCTCGAAAAGTGCGATAAAATCTGGGAAACTCTGAAAGTCATAAAAAATCTCCAGATCTCAGATTCCAACGAAAAGAAGACCGAGAATTATGAGGCAGCTTCCCAAGATGCTGTGCAAAGTCATACAAAGCCCCCATCACCAGAACCGATGCAGTACCATCCCGTCCTAAACAACGGGAATGCTGCCTTACCCAACTTCCAGTTCGCCATCAAGAGCTGGAAACGATTATACACCTGCACCTATTGCGGAAAGCAATATACCGAGAACCGAAATCTAAAACTGCACCTTTCAAGAGTTCACGGTATAGATCCTATTCCCAAAGATGTTCCTCGACCAAAGGAGGTTCCTAAAGTTCCTCTTACTATTGAAACTCCACGTCCTCAAGATATTTCCCGTCCCAAAGAAATTCCTCGTCCTAAAGAAGTACCTCAACTGAAAGAAATTATTCGTCCCAAGGAAGTGGCTCGACCTAAAGAAGTAGCTCGTCCCAAGGAAATGGCTCGCCCCAAGGAAGTTTCTCGTCCCAAGGAAGTTCCTCGTTCCAAGGAATTACCTCCTCCCAAAGAATTACTTCGTCCCAAGGAATTAGCTCGTCCCAAGGAAATTCCTCGAGTTAAACAAGACCCTTTAGTTTGCCAAACATGTGGCAAAAGATACGCAGATGCTCGATCCGTAGCTGGCCACTCTCTTCGCGTGCATGGAATTCTAACAGAGTTCCACGAACGATGGTTATCTCAACAAGAAAATCCCAACGACTATACTGTTGAAGATCTACTAAAGCGACATGCCTGCAATACTTGTGGTAAAAGATACAGTTGCATGAAAAGTTTGCGATTGCACTATTTGCGGGAACACAATGTTGTCATTCCCCTGTTGCGAGGTGGTAAAAATAGAGGCTCCTTGGTTTCAGTGCCGATAAACACAATCACACACTCCGGTGACATGCAAAAACACATGAATGTTTGCAACATTTGCGGAAAGAAATACACCAAAAACTGGTACTTGCGTGTACATTCTCTCGAAGTTCACGGCATTCCCATGCCTTTCGGCAGAATTAAGCAAAATTACACTCCTAATCTGCGAGtcataaagaaagaaattattgaagaacCCGAACCTACAGATTATCCCCAGTCAGAGGAACAGAAATTCTCTTCAATGGTAAATTTCGCAACGCCTACTGAAAAGTACGAAATGGATCAGAATAGGATGCCAGCGCGAGTACTGAAGATGTACCAATGCATGGCTTGTAAGAAGGAATTTATCTCTATTTCTAAGCTACGGACTCATTCCTTAACACGACATGGAATCATCATACCGAGGTTACGGAAACCTTATAGGAAAAACAATCCTTCGTCTATGAAGGTGGAATTCGATGCGAGGGTTAAGTTGGAGGAATTCAAAAAGACTCAAGTTTCGACTCCGAAGCAAGTGAGTTTAGACCGATACTTTAAAACCCCCCCGATTGGAGGAAACATAGGTAAGGTCAGTCCAAATGTACCTCCACCACAGAGTGCTCCCAAGAGAGAAAAAGTGGTCAAGCAAATGGCTCGTCCAAGGGAAATTGTTCCTCCAACGAAAAGTGATCCTGCTCCAACTCCAGTGAAGGTCGTCACCAATGCTCGTCCGAAAGTACAGGTTCCGAAGGTGCCATCAGAGTTGGTGAAATGCAATTTGTGTGCTCGGACCTGCAAAGACATCAGAAAGCACTACACTGCTTATCATAAAATTCGTTATCCCGAGTCTGTAATGGATGCTCCCTTCTTCACCGTCGAAGCAGTGGAACCTGCGACTTCCGCAGTTCCTAAAAGAGAAGTGGCGCCACCACCACCACAAGAAAGTCAAGGACTTTTAACTAACAGACCCTCGAAGAAGAGAAGACGTAGATTTGCTTCTTTGACAATGAGAAAGAGACGTAGAACTGAAAAACCTCGACAACTCCAGGATCATCTGGTCGAGGCTCCGGTGGTCCAGACTCCAGTGGTGCAGAGTCCAAAATTGCAGACTCCGAAATTACAGAGTACAAAAGTACAAAGTCCCTTGATCCAAAGTCCAGCTACTCGGATTCCTGAGATCAAGAACTTTGGAGTTGAGATTCCCAAACCCAAAAAAGTGGTTGGCCCTGTTATAACAGGCCATAAATGTACAATCTGTAGTGGATACTACGCGAGTCCTAAGAGCTTGAAAATCCACCGACAGAAACATAGACTGAAGGGTGAGACTAAAGAGAACATTCATCTCATAAAACATAATTACAAAAATGGGTGGAAGACATCACAGGAGAAGAAACTCAACTTGTCGACCTTCGATGAATCTTCGGTGAACATGGATATGAATATGGATGTCGATGTTGAGAGTGAATCCCGAACCTCTTACAATGAAAGCGTTAATCAGTCGTCTAGTTCAGAATCGAGGGATAGCAGTAGAAGATCCACGAGGTCTAGCATGAATGCCTACAATTTAAGCGAAACTACGTGCGAATGCGGAAGGTCTTTCCGTGATCCTCACACCTTGTTTATGCATAAGGAGAAGTGCAGAACAGCGCATAGAATCGAGAGAGAGAAGACGATGGTTACGAGATCCAGTAGTGATCGTGATTCCGGGATCGGAATTAGTATCacgataaagaagaaaaatgattctTATGAGATCGTCAGCAGGGACAGTGGTGACGATGATAAGTCCAAAGATTCTACTACTTCGAAGGACTTGGATCAGATGTCCCGGTCTTCCGATAATTCTTCTAATCCGGACTTTGGTGAGAGGACTTACCCTGATCTGTTGCCAGCGCAATGCAGCAAGGATCATAGCGTTTTAAAGATTCAGGTTGCCGAAGATGACGAGGATGTGGACATCGAGGACGACAGTCAGACAAACGTCACTGAAACCGAACCCATGCTCGTAGACCCAGTCGAAGAAAATAAATCTCCTGAAAACGAGAGCAGGACACCAGATCCTTTAGATATGGACCTTTACAGATGTGCAACCTGCCTTGAACTCTTCCAAAAGAAGGAAGACTTAACGAAGCACATGGCTTCTCATGAAAAACTTCCTGCTAGACAGGAATGTCCTTGTGGAAAAACTTTCAGAGGAGCCCAAAGTTTTCTCACCCACGTGCAAGAACATCATCCTCTCTGGCTTCAGTGCGGTTACTGTGATGCGACCTTTTTAAATAGTAAAGAGTACTCCGCACACTCTTGTGATGCCAATCAGggaagagaattcaaagatcTGCAGGATGTCACCTGCCACTGTTGTTTGTCTAAAGTGAAGATGGTAAACTTTGACGCTCACGTAAAACGAGAACATTTAGTCCCCAAGGCTCCctatttatgctactattgtaAAATGAGATTCTTTAGCAGCATTCAAAGAAGAGCACACTTGACTAGAGAGCACGCTAGACCCTCCTGCAAAGTTTGTGGCAAAACTTTGCGTTTCGACTTTGCAGCTAAGCACGAAGCTTATCATGACGGCCTTGGTTACCCTTGCCACATTTGTAAAAAAGCTTTCACTAGTACAAAACTCGCGAATAGTCACAAGTTCGAAGTTCACGTCAGGGAAGATGAAGAGTGCAAAGTTTGTCACAAAGTGGTCAGTCATAGACACATGAGATATCATGTGCGAATGCATTCTAACAAGGACAGTTGTCAAATTTGCCATAGAAGTTTTACACATAACCGTACACTACAGGATCATATTCATCTGGTTCACGGCAACGATTATCCATTTGTTAAGTGTGATAAATGTGAGCTAACGTTTACGTCTGAAAGTTATCTTGAGCGACATTCAAGTCAAGGTATGTGCAAGTATCTTAATAAAGAGTCGAAGGTGATGGAAACTGAGGAGGCGGATGAAAGTGATGAGAGTGAAACTGAGGGTGAAACTGAGGATGTGGATGTAACTGAGGAAGAGAAGGAAACTCAGGCGGTAAAGGACATTTCGAAAGCGAAAGCAGCTGCGGACAAGAAAAGTTTAGAGAAGCAGACATTGGACAAACAAATTAATGGTCAGAAAGAAGTTTCGGAGAAGGAAGAAACTGAGGAACTGAACATAACTGAGGTGTCAGAAACTGAGGAGGTGAATGTAACTGAGGATGTGATAGAAGCTGAGGAGGTGAATGTAACTGGAGATGTGGAAGAAgcagaagaaaaggaaaaaattgaggACGTAGCAGAAACTGAGGAGAGTCTCCGGGAGGGTGGTTGTGTTCTGCCCGAACACTCCCTCGAAATAACGAATAAAACGAAAACAAGTCCAAGACGTGCCTCTCGCGGCTTCGGATAA
- Protein Sequence
- MNEITPQVFASASNSEVNTVLATTCEEAVTIKQELEYINDENFVVQSTESVISDIRENNANMLSSIKESFGIKDCFIRLEKCDKIWETLKVIKNLQISDSNEKKTENYEAASQDAVQSHTKPPSPEPMQYHPVLNNGNAALPNFQFAIKSWKRLYTCTYCGKQYTENRNLKLHLSRVHGIDPIPKDVPRPKEVPKVPLTIETPRPQDISRPKEIPRPKEVPQLKEIIRPKEVARPKEVARPKEMARPKEVSRPKEVPRSKELPPPKELLRPKELARPKEIPRVKQDPLVCQTCGKRYADARSVAGHSLRVHGILTEFHERWLSQQENPNDYTVEDLLKRHACNTCGKRYSCMKSLRLHYLREHNVVIPLLRGGKNRGSLVSVPINTITHSGDMQKHMNVCNICGKKYTKNWYLRVHSLEVHGIPMPFGRIKQNYTPNLRVIKKEIIEEPEPTDYPQSEEQKFSSMVNFATPTEKYEMDQNRMPARVLKMYQCMACKKEFISISKLRTHSLTRHGIIIPRLRKPYRKNNPSSMKVEFDARVKLEEFKKTQVSTPKQVSLDRYFKTPPIGGNIGKVSPNVPPPQSAPKREKVVKQMARPREIVPPTKSDPAPTPVKVVTNARPKVQVPKVPSELVKCNLCARTCKDIRKHYTAYHKIRYPESVMDAPFFTVEAVEPATSAVPKREVAPPPPQESQGLLTNRPSKKRRRRFASLTMRKRRRTEKPRQLQDHLVEAPVVQTPVVQSPKLQTPKLQSTKVQSPLIQSPATRIPEIKNFGVEIPKPKKVVGPVITGHKCTICSGYYASPKSLKIHRQKHRLKGETKENIHLIKHNYKNGWKTSQEKKLNLSTFDESSVNMDMNMDVDVESESRTSYNESVNQSSSSESRDSSRRSTRSSMNAYNLSETTCECGRSFRDPHTLFMHKEKCRTAHRIEREKTMVTRSSSDRDSGIGISITIKKKNDSYEIVSRDSGDDDKSKDSTTSKDLDQMSRSSDNSSNPDFGERTYPDLLPAQCSKDHSVLKIQVAEDDEDVDIEDDSQTNVTETEPMLVDPVEENKSPENESRTPDPLDMDLYRCATCLELFQKKEDLTKHMASHEKLPARQECPCGKTFRGAQSFLTHVQEHHPLWLQCGYCDATFLNSKEYSAHSCDANQGREFKDLQDVTCHCCLSKVKMVNFDAHVKREHLVPKAPYLCYYCKMRFFSSIQRRAHLTREHARPSCKVCGKTLRFDFAAKHEAYHDGLGYPCHICKKAFTSTKLANSHKFEVHVREDEECKVCHKVVSHRHMRYHVRMHSNKDSCQICHRSFTHNRTLQDHIHLVHGNDYPFVKCDKCELTFTSESYLERHSSQGMCKYLNKESKVMETEEADESDESETEGETEDVDVTEEEKETQAVKDISKAKAAADKKSLEKQTLDKQINGQKEVSEKEETEELNITEVSETEEVNVTEDVIEAEEVNVTGDVEEAEEKEKIEDVAETEESLREGGCVLPEHSLEITNKTKTSPRRASRGFG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -