Most038375.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melikaiella ostensackeni
Gene Symbol
Kr-h1
Assembly
GCA_032362435.1
Location
JAUMHM010000089.1:847187-848755[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.00011 0.036 16.7 1.7 1 23 60 82 60 82 0.99
2 8 8.4e-07 0.00027 23.4 0.9 1 23 90 112 90 112 0.99
3 8 7.8e-08 2.5e-05 26.6 1.2 1 23 118 140 118 140 0.99
4 8 2.4e-06 0.00079 21.9 3.1 1 23 146 168 146 168 0.99
5 8 8.6e-07 0.00028 23.4 1.1 1 23 174 196 174 196 0.98
6 8 0.00015 0.048 16.3 4.0 1 23 202 224 202 224 0.99
7 8 5.9e-05 0.019 17.6 1.4 1 23 230 252 230 252 0.96
8 8 6.4e-07 0.00021 23.8 1.3 1 23 258 280 258 280 0.99

Sequence Information

Coding Sequence
ATGGTGGGCTATTATCAGGAGCCGATTCTGAAACGAGAAGCGGGGCAGAAACCGATATCGGTTGTGTCTCCGAAGTTGGAGCCGACCAAATCCGTCAAGAGTCTTGTCTGCAGTCCGGACTTGACGGTATTTGCAACCCCATCCGCAGATCGTTTAACGGCGATTACGGAGAAGTCCTATCAGTGCATGCTCTGCCAGAAAATATTCGACCAGAAAAACGTCTACCAGAGTCATATGAGGTCTCACGGAAAGGACGGAGAGGATCCTTACAGATGTAACATCTGCAGCAAGACCTTCGCGGTGCCGGCGAGACTCACGAGGCACTATCGCACCCATACGGGTGAAAAACCCTACCAGTGCGAGTACTGCAACAAGTCTTTTTCTGTCAAAGAGAATCTCAGTGTTCACAGGCGCATCCACACCAAGGAGCGCCCCTACAAGTGTGACGTTTGCGAGAGAGCGTTCGAGCACAGTGGCAAGCTTCACCGACACATGAGAATACACACGGGCGAGCGACCTCACAAGTGTTCCGTCTGTGCCAAAACTTTCATCCAGAGTGGCCAGCTTGTCATCCACATGCGTACACACACTGGTGAAAAACCCTATGTCTGCAAGTCCTGTGGCAAGGGATTCACGTGTTCGAAGCAGCTCAAGGTTCACACTCGCACCCACACTGGCGAAAAACCCTACAAATGTGAAGTCTGCGGAAAATCCTTCGGCTATAACCATGTGCTCAAGCTGCACCAGGTCAATCACTTTGGTTCCAAGGTATACAAGTGCACCCTCTGCAATGAGACTTTCACCAACAAGAAGAACATGGAAGTTCACATCAAGGTGCACTCTGACTCGAGCTCGAATTCACCCCGCGATTCTCCAATCGAGCCTGCGATTGAGATTGCACCAGCCAGCAGCACCACAAGTATCACCGGCACGAGCAGTGACAAGGAGAACAAGACTGATGAAATCTGCCATACGACTGCGTCAAGTTATATGGAGCCTAGGGATTTCTCTTACTACCTTTATCAGCGGGATCAGTATTCTCAGGCCGCATCAAGCCCCATGGGAGTGAACCCCGCGCTCCTGGCTGCGGCAGCAGCTGCAGCTGCTGTGGAGGAAAGGTCATTCCAAACTCTTCCTCTGGCTCCACAGCCCCAGGAACCAACTCAGGTCTTCCTCTATCCGGAATTGTCGCCGGCCTACTCGCCGTACTCGTCATATGGGGGCCCGAACAATGACCTCGCCGGAAACGATTGCTCGTCGCTACTCAACCTCCCTGGAAACGACGCTCGAAGGAGAGTCGAAGCTGCCTTAGAAGCTGTCGAGGAACAACGACAAAGGGAGTATGGAGTCAGGGTAGAAAAGCATCCGATTCTAACACCCCCCAGCAGCAATCCAGTGAGTCCAGCACCATCACCAGATCCCCTCGACCTGGTAATCCCTGTCAAGGAAACCCTGATACTTCCACCGAGGAAGCGTTGCAAAATGATCCTCGAATCCATGGAACACGAGCGGTCCGGGATCAATGCACAGAGACAAAATTCGGTGATTCAGTTCGCGCGGGCTTCTTAG
Protein Sequence
MVGYYQEPILKREAGQKPISVVSPKLEPTKSVKSLVCSPDLTVFATPSADRLTAITEKSYQCMLCQKIFDQKNVYQSHMRSHGKDGEDPYRCNICSKTFAVPARLTRHYRTHTGEKPYQCEYCNKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERPHKCSVCAKTFIQSGQLVIHMRTHTGEKPYVCKSCGKGFTCSKQLKVHTRTHTGEKPYKCEVCGKSFGYNHVLKLHQVNHFGSKVYKCTLCNETFTNKKNMEVHIKVHSDSSSNSPRDSPIEPAIEIAPASSTTSITGTSSDKENKTDEICHTTASSYMEPRDFSYYLYQRDQYSQAASSPMGVNPALLAAAAAAAAVEERSFQTLPLAPQPQEPTQVFLYPELSPAYSPYSSYGGPNNDLAGNDCSSLLNLPGNDARRRVEAALEAVEEQRQREYGVRVEKHPILTPPSSNPVSPAPSPDPLDLVIPVKETLILPPRKRCKMILESMEHERSGINAQRQNSVIQFARAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00676995; iTF_00201000; iTF_00011392; iTF_00461042; iTF_01390548; iTF_00882402; iTF_00880686; iTF_00883253; iTF_01392230; iTF_01392975; iTF_01393746; iTF_01394584; iTF_01391418; iTF_00881482; iTF_01389678; iTF_00879934;
90% Identity
iTF_01390548;
80% Identity
-