Basic Information

Insect: Melikaiella ostensackeni
Gene Symbol: -
Assembly: GCA_032362435.1
Location: JAUMHM010000072.1:11767027-11774583[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.016 5.2 9.9 0.6 1 21 360 380 360 381 0.95

2 18 8.3e-05 0.027 17.1 0.6 1 23 433 456 433 456 0.98

3 18 0.0029 0.93 12.3 0.3 2 23 460 483 459 483 0.88

4 18 0.68 2.2e+02 4.8 0.7 2 23 507 528 506 528 0.89

5 18 0.0024 0.77 12.5 0.4 1 23 536 559 536 559 0.95

6 18 0.0081 2.7 10.9 3.0 1 22 565 586 565 589 0.91

7 18 0.00042 0.14 14.9 3.7 1 23 674 696 674 696 0.98

8 18 0.01 3.4 10.5 1.2 1 23 703 726 703 726 0.92

9 18 0.00014 0.044 16.4 3.2 1 23 732 754 732 754 0.98

10 18 0.0002 0.066 15.9 0.4 1 23 760 782 760 782 0.97

11 18 0.00029 0.095 15.4 2.3 1 23 788 810 788 810 0.97

12 18 0.048 16 8.4 2.8 1 23 823 845 823 846 0.95

13 18 0.00016 0.052 16.2 2.3 1 23 860 883 860 883 0.96

14 18 9.3e-05 0.03 17.0 0.3 1 23 891 914 891 914 0.97

15 18 5.6e-06 0.0018 20.8 0.5 1 23 920 942 920 942 0.98

16 18 0.00035 0.11 15.1 4.5 1 23 948 970 948 970 0.98

17 18 3.8e-06 0.0012 21.3 0.8 1 23 976 999 976 999 0.98

18 18 0.084 27 7.7 0.2 2 23 1006 1027 1005 1027 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.016	5.2	9.9	0.6	1	21	360	380	360	381	0.95
2	18	8.3e-05	0.027	17.1	0.6	1	23	433	456	433	456	0.98
3	18	0.0029	0.93	12.3	0.3	2	23	460	483	459	483	0.88
4	18	0.68	2.2e+02	4.8	0.7	2	23	507	528	506	528	0.89
5	18	0.0024	0.77	12.5	0.4	1	23	536	559	536	559	0.95
6	18	0.0081	2.7	10.9	3.0	1	22	565	586	565	589	0.91
7	18	0.00042	0.14	14.9	3.7	1	23	674	696	674	696	0.98
8	18	0.01	3.4	10.5	1.2	1	23	703	726	703	726	0.92
9	18	0.00014	0.044	16.4	3.2	1	23	732	754	732	754	0.98
10	18	0.0002	0.066	15.9	0.4	1	23	760	782	760	782	0.97
11	18	0.00029	0.095	15.4	2.3	1	23	788	810	788	810	0.97
12	18	0.048	16	8.4	2.8	1	23	823	845	823	846	0.95
13	18	0.00016	0.052	16.2	2.3	1	23	860	883	860	883	0.96
14	18	9.3e-05	0.03	17.0	0.3	1	23	891	914	891	914	0.97
15	18	5.6e-06	0.0018	20.8	0.5	1	23	920	942	920	942	0.98
16	18	0.00035	0.11	15.1	4.5	1	23	948	970	948	970	0.98
17	18	3.8e-06	0.0012	21.3	0.8	1	23	976	999	976	999	0.98
18	18	0.084	27	7.7	0.2	2	23	1006	1027	1005	1027	0.94

Sequence Information

Coding Sequence: ATGGAATTTCCTTTATCAGACAGCATTGGATACGAAGACATGGTGGATAAAGATTCGTCGCCTaaatcccaaaattttcaagtttgtaAGTTGTGTGGTGTTGATATCGCtaattcagttgaaatttttagtaagAAAGATGCGGTTGCACAAAACATAAATTACATTCTACTATCAAatattttcaaagagGATAATGTACCAGTTATTGTTTGTAAAAACTGTTGCATAAAAGTCAACGCTCTTAGTGAATTTACGACCCAGTGTTTACAGAAtgagcaaacatttttagacataGCAACCTCGATATCTTCCACAGAAAGTGAATCCGTCGAAATTAAGAAAGATACTTCAAAATTACAGTTTAAACAAACATGTCCACATTGTTATGCGAATATACTCATTCCGCAGAACAACCAATCACTCAATTTGCAAAATGAGCTTCAGCTTTCATTATGCGACGATAACGCTTCGAATTtagaattggaaaatattctcaACGAAGCTATTTCTTTAAATCTAGAATCGGAGAGTATCTTAAACGATATTACAACTTTGAATTTAGAAgctgatacaattttaaatgatttcgccAATTCAAATCCGGAATGTGAAGCTATTTTCAACGAAGCAAGCCCTTCGAATGTAGAAAGGTCAaaaacaatttctgaaatttcaaaaccagattatgaaatatcaaaaccgatttctgaagaattaaaagaaatttctaaggCATCAAATCCAATTTTAGATAAAGAACTGGAAGTTCGATGCACGAGAATTGAAAGCCTAAGTACTGTGAAACCGATTGATCTAGAGAAAATCGATGACCttaaaaatggaggaaaattaaagagaaactcacctaagaaaaaaaaacgtagcCTAAAAAcgaagaagaaaagaaactcAAAGTTCGATGTTCCCAAATCAAAAAAACTACGAAAAGAGATTATTGACccttttcaaaatgagaaaaaagacttaaaatgcattttatgtaatttagaatttctttcaCGAGATAGATATGTTTTTCATGTAGAGCAACATGAAAATGGCGATTTAGGAAAATTTACTTGCCAGAAATGCAAGACTCGTTTGAACACTGAGGGTGAATTGTGGAAACACTACCAAAACGATTGTCTTCCAGATAAAGTTGCAAGTTTAGAGCAAGCTTCTGATTTCAGtacagaagataaaataatttgtaaggTTTGCAAAGCATTGTTTATTCTGAAGGAAAGATATGATTTTCATATGGAGCTGCATGAAAAtggagattttgaaatttttaaatgtcccAAGTGcaataaagtatttcaaaccGAAACCGTCCTCTGGGATCATTACCAGACTGAGCATAATCGTTTTGCATGCATTGAATGTGGGAGAATATTTAGAAGGAAAGCGAGTTTGGATTATCATTTGAAGACTTCTGGTCACCCAAGTGTGGAAAATTTAGAAGaggagaaaatcaaaataaccgATTCACCTAAATCAAAACTATTGATAACTTGTGCCAAATGCGGAGCTCGATATCGTCGCCAGGAAAGATACGAATTCCATGCCAAGAGACACGAATTAGGACAAATAAACCTATTCATTTGCACAGAATGTGAGAAGGAATTCACGAATGAAAACGTGTTATGGGATCATTACCAATATACGCACAGGAAACCCGAATGTTTCACTTGTTTAACTTGCggcaaactttttcaaaaacagtttcttTTAACTAAACATCAAATCAAGTTTAAACACAAAGACAGAAAAGAGATAGATGTTAAATCAAAGAGTAAGAATCAAAGTTCTCCAGTGGGCCAAAATATAGTAAAATCGGAAACTAAAGATGTCGTCCAACCGAACTTTTTGGACTGCGTCCTTTGTGGCGAaccagtttcaaattttgatcccgATTCTCTGAATGACGCAGTAACTTGTGCCAAATGTAAGTCTCCCGGACTCTCTTTACAAGTCGATTCAGATGGTGCCAAAGTCCTTTCCCGTCGAGAATATGATTGCAATTTGTGTTACAAACATTTCTCAACTAAAGATAGACTAGAGTATCATATAATGCGCCATTCCGAGAATATGGATGAATTTATTTGCAGTACTTGTGGCAAAAAACTTAGTACTGAACAGGCACTTTTCGAACATCATCTTTTCGTCCATAAAGGAGCCAGGCCTCATGTCTGTGAATTATGTGGAAAATCTTACCAGTTTCGAACAAGATTGAAGGAACACATGAGAACCCACAGTGGTGAAAGACCTTTCGCCTGCGAGATTTGTAGCCAGGATTTCATGACAAGCAACGCTTTGCGCTCTCATCTGAAAACCCATCTCGACGATAAGAAATTTCATTGTCAACTCTGCCCAAAACTCTTTCGACGTCAGCAGGACCTGAACGAACACTTGGAGCGTCACTGGAAGAACGACAAGACCCTAAACTTATCCAAATTCTTCCACTGCGAAAATTGTTCCGAATTTTTCCCCACTATCCGCGTTCTTAAAGCCCATTTAAAAGAGCATCATGGAATTGAAAATGGAGACCTAACTGACCTCCATCCTTGGTTCGAGTGCGAAAACTGTCCAGAAAAATTCAAGCATCAAATGTCCTTGAAATCTCATAGAGAAAAAGTCCATAAGGGAAAAACTAAACCGATTTATCGCTGCGAAAAATGCgatataatttacaaaacagCGAGACTCTTGGCGAGTCACATGAATAATAATCATGGAGGAGAAAAACGATATAAGTGTGCCCAATGTGGAAAAGAATATAATCAGTCAAAGTCCTTACAAAGTCATATTTTGATTCACACTGGGGAAAAGCcatttaattgtgaaatttgtgaGATGACTTTTAGAACCAAGGAGTCTCGGAATCATCATCAGAGGAAACACACTGGGGAAAAACCTTATAAGTGTCCAGGATGTGATAAAACTTTTGCCACTGCTGGACAAAGAAGAGAACATAGAAGGAAAACTCATGAAGATGGGAACGAACTGCCTTGTCCTGAGTGTGGTAAGATTTGCTTTGGGGAACGTGGAGTTCGTAGTCATTTGTCTATTCACTCGATTGAGAAGCGAAAGATCCTAGCTTCGACGTAA
Protein Sequence: MEFPLSDSIGYEDMVDKDSSPKSQNFQVCKLCGVDIANSVEIFSKKDAVAQNINYILLSNIFKEDNVPVIVCKNCCIKVNALSEFTTQCLQNEQTFLDIATSISSTESESVEIKKDTSKLQFKQTCPHCYANILIPQNNQSLNLQNELQLSLCDDNASNLELENILNEAISLNLESESILNDITTLNLEADTILNDFANSNPECEAIFNEASPSNVERSKTISEISKPDYEISKPISEELKEISKASNPILDKELEVRCTRIESLSTVKPIDLEKIDDLKNGGKLKRNSPKKKKRSLKTKKKRNSKFDVPKSKKLRKEIIDPFQNEKKDLKCILCNLEFLSRDRYVFHVEQHENGDLGKFTCQKCKTRLNTEGELWKHYQNDCLPDKVASLEQASDFSTEDKIICKVCKALFILKERYDFHMELHENGDFEIFKCPKCNKVFQTETVLWDHYQTEHNRFACIECGRIFRRKASLDYHLKTSGHPSVENLEEEKIKITDSPKSKLLITCAKCGARYRRQERYEFHAKRHELGQINLFICTECEKEFTNENVLWDHYQYTHRKPECFTCLTCGKLFQKQFLLTKHQIKFKHKDRKEIDVKSKSKNQSSPVGQNIVKSETKDVVQPNFLDCVLCGEPVSNFDPDSLNDAVTCAKCKSPGLSLQVDSDGAKVLSRREYDCNLCYKHFSTKDRLEYHIMRHSENMDEFICSTCGKKLSTEQALFEHHLFVHKGARPHVCELCGKSYQFRTRLKEHMRTHSGERPFACEICSQDFMTSNALRSHLKTHLDDKKFHCQLCPKLFRRQQDLNEHLERHWKNDKTLNLSKFFHCENCSEFFPTIRVLKAHLKEHHGIENGDLTDLHPWFECENCPEKFKHQMSLKSHREKVHKGKTKPIYRCEKCDIIYKTARLLASHMNNNHGGEKRYKCAQCGKEYNQSKSLQSHILIHTGEKPFNCEICEMTFRTKESRNHHQRKHTGEKPYKCPGCDKTFATAGQRREHRRKTHEDGNELPCPECGKICFGERGVRSHLSIHSIEKRKILAST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00200986;
90% Identity: -
80% Identity: -