Most087139.1
Basic Information
- Insect
- Melikaiella ostensackeni
- Gene Symbol
- -
- Assembly
- GCA_032362435.1
- Location
- JAUMHM010133705.1:1341-2109[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-07 0.00039 22.3 0.0 4 45 21 63 18 63 0.87 2 2 8.8 9e+03 -1.3 0.0 33 44 126 137 126 138 0.89
Sequence Information
- Coding Sequence
- ATGCCAACAAAGTACATTAGAAAATCAAGTGGTGCTAATCGCAAACTTTGGACCGAACATGATCTAGGGGTTGCGATAGAGAAGGTCAAGAGTGGTGAAATCAGTCTTCGACAAGCTGAGCGTGATTACAAGGTTCCTGTTCgcactttgaaaagaaaaatggcAAATAATAAACCCAAGACTTCTCGACTAGGTCCTGATAGTTGCCTTGGCTACGAAAATGAGCGAAAATTGGTCGACCACATCAAAAAACTTAGTGCCTCTGGTTTCCCAGTCGACAGACATAAAGTTCGTGAACTGGCCTACCAATTTGCCGAGTCATTGAAGATACCTCACAAATTCAACCGTACGAAAAAAATGGCTGGCTTTGATTGGCTGTggtcatttttgaaaagaaatccgGATCTTTCGGTTCGACAATCAGAAGGATTATCTTTGGGACGAGCTCATGGCTTCACTAGACAGAAAGTGAACGAGTTTTACGATTTACTGGAAAGAGAGGTAGAGAAACATGGCCTGCGAGATAAGccccaaaattttggaaacgttGACGAGTCAGGCTTGCAATGA
- Protein Sequence
- MPTKYIRKSSGANRKLWTEHDLGVAIEKVKSGEISLRQAERDYKVPVRTLKRKMANNKPKTSRLGPDSCLGYENERKLVDHIKKLSASGFPVDRHKVRELAYQFAESLKIPHKFNRTKKMAGFDWLWSFLKRNPDLSVRQSEGLSLGRAHGFTRQKVNEFYDLLEREVEKHGLRDKPQNFGNVDESGLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -