Most019778.1
Basic Information
- Insect
- Melikaiella ostensackeni
- Gene Symbol
- -
- Assembly
- GCA_032362435.1
- Location
- JAUMHM010000071.1:7270793-7274013[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-09 5.4e-06 28.3 0.1 4 40 18 53 15 57 0.88 2 2 0.00034 0.35 12.9 0.1 4 41 304 340 301 344 0.78
Sequence Information
- Coding Sequence
- atGACGCGTTCGAGAAAGCGCACCACAAACATAGCGAGATGGTCTTCAAACGACCTACAAGCAGCTTTAAAAGCCATGCAAGAAGGAAAACCAATGGCCCAAGCGTCCGCCTTATACGGAGTTCCTCGCGCAACTATATACAGGAGAATAAAGCGCAACAAATTTTCCGCTCCAAAAATGGGTCGGAAGTCTGTCTTCTCGAAGGAACAAGAGGAAATTCTAACCAATCACATAAACAAATTACAACTGACATGTCCCCTGAACTCCCAAAAAGTTCGAAAACTAGCTTTTGATCTTGCTGAGAAATTACAGCTTGATCACAATTTCAATAAAGAGAAACGAGAAGCTGGTCAAGAGTGGCTATCATCTTTCCTCAAACGAAACCCTCGAGCTCAAATTATTAAACGTGCTGGTGAGAGAATTCGAGAGACACAAGAAGTTAAAACCGAAAACCCCAATTCCTTCGACAATTTGGATGAAGATCTGTCTACGATTGAAAATCATGATGAGCTTAAGAAAGAAGAGATATTCCTCAAGATGGAAGTGGAATTTTCCGAGGATTCAGAAATTCTGGATTTCCATTCTGATCCTTTAGAGATTGATTCCGAGGTTTTTGGGAGCGAAAGTGACAGAAGCTTAGAAAACTCGAAGAGTATTAAAGAACCTGATAAAGAAGTCGAAGGAAAATTCGGGATGAAGTTGAGAGTGAGGGAGAAGATAAATGTTATTGAAGAGAGTACAAGTATTTTAAGAACTCACTTGCTTAAACAAACGAAGATTGTGGATAGAAGTACCTTCCTTGATCAGTTAGAGAGGTCTAATCAGGTTGTGGTTCAAGAGAAAGATGATAGACCTGCGCAGAAGaagcgTACCAAACGAGCCACGAAAACAGTGTCTTGGACTGCCAAGGATTTAAATGCAGCTCTAGAGGAATTAGCACAAGGGAAAACGATGACAGCAGTTTCAGCTTTGCATGGCATTCCCCGCACTTCAATTTACAGAAGattaaagcagaaaaaattttcctcgaCAAATCTCGGTCGAAATTCGGTCTTCACGGCAAAACAAGAACAATGCCTGACTGGAGAGTGA
- Protein Sequence
- MTRSRKRTTNIARWSSNDLQAALKAMQEGKPMAQASALYGVPRATIYRRIKRNKFSAPKMGRKSVFSKEQEEILTNHINKLQLTCPLNSQKVRKLAFDLAEKLQLDHNFNKEKREAGQEWLSSFLKRNPRAQIIKRAGERIRETQEVKTENPNSFDNLDEDLSTIENHDELKKEEIFLKMEVEFSEDSEILDFHSDPLEIDSEVFGSESDRSLENSKSIKEPDKEVEGKFGMKLRVREKINVIEESTSILRTHLLKQTKIVDRSTFLDQLERSNQVVVQEKDDRPAQKKRTKRATKTVSWTAKDLNAALEELAQGKTMTAVSALHGIPRTSIYRRLKQKKFSSTNLGRNSVFTAKQEQCLTGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -