Basic Information

Gene Symbol
ct_1
Assembly
GCA_032362435.1
Location
JAUMHM010000088.1:12284241-12298350[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-27 2.1e-23 84.3 0.0 2 72 415 486 414 491 0.95
2 3 2.4e-32 4.2e-28 99.4 0.0 2 77 821 897 820 899 0.96
3 3 1.3e-30 2.4e-26 93.8 0.0 3 75 1057 1130 1055 1134 0.95

Sequence Information

Coding Sequence
ATGCTTATGTGGCTCGTTATGGATGGGCCAattagtCAATTGGTTGAAGAAGTATCCAGGCTTCAACAGAGTTTGCAGCGACTCCAAGAAACGAGCGCACAGGCGACGGCGCGCCTCGAAGAGGAACTCGAAGCGCGCCGACAGCACATCAGTAGACTGGAGAGTAAACTGGAAAGGCAGAGAGACTACGATGACCTGAAACGAGAAATAAGCGTCTTAAGATCCGTCGATCTTTCGCAAATACCGACTGGAGAACCTGGAAAAAGCCTCGAACACCTCCTCATGGAACGCTCAAAGGCACTCCAACAAGCGGAGAACCTCAAACCACCAAGCACACCTGACACTCTAGGTGGACTATCGTCACCCCTGCAGCGTGCCACGACCGCCTCGCCCCACGGGGTGGTAAATGCACCACCGTCATCCCTAGTATCCTCCCAGACAACACTCCCAACTCGCTCCACTCCGACACCATCTTCTGCCACATCAACGAGCTCGAGCCTCCTTTTCCCACCACCTCTCCAAAACGTGGAGACCTTCGGTTCCTTTCTCGGCGAAGAGATTGTCGCAAACTGGAGGCGATCGCTGGAGAAAACGATCATGAGCCAACAACAGCCACAGCAAACGTCACAAGCTTCCCAACAACAGCAGACACAATCTACCGTTCTAGGACTTCACCCTCCTTCGACGCCAAGTAGTCTAAATCATCTTCCATCACCAACAGATCCAATCTCGTCGTCCAACACGCCAGCCAAGTCGAGCACACCTCTGGGTACCACTCTGGGTTCCCTGGATGCGACGGAAAAAGCCTCAACGCCGGTACCAGGTCACGAGACACCAGCACCGCCTACGCCCTCATCAACGGCCTTGACATCTCCACCGGCCACATTACCACCTCCAACATCCACTGCGGATTCCACCGTCAATGGAGGGAGTATCGGAAGTCTGAGCAGTCTCGGAAGCCTCGCAAATCTCGTACCACCGCCCAAGAGCCCCGCAGAAGAATCTTGCCACAATAACAACAATAGCCATCATCTAGCCAACAACAACATAGGTGCCCTCAGTGTTTTGGATAGTCTGAAGGGTCCTTTTCGATTCGACGACAGGACTCATCCCTTTAGATTTGGGGACGAGTTCGGTGCAGCTGGAATGGCTGGAAGGCTTGGTGAATCTCTTATTCCTAAAGGGGATCCCATGGAAGCTAGACTTCAAGAGATGCTGCGGTACAACATGGACAAGTACGCTTCCCAGAATCTGGATACGTTAAACATCGCGAGGAGGGTTCGTGAGCTGCTCTCAATACACAATATTGGTCAGAGACTCTTCGCCAAGTATGTCCTAGGTCTCAGTCAAGGGACCGTGAGTGAGCTGCTAAGTAAACCAAAACCTTGGGATAAACTGACGGAGAAAGGAAGGGACAGTTATCGGAAGATGCACGGATGGGCTTGCGACGACAATGCTGTTATGCTGCTCAAGTCTCTCATTCCCAAAAAAGAGTATGTTTCAGGCAAGGAGCAGGGAATGCCAGCATTTGCTCGTGGTCCTCAGGATGGCCCACCGGACATGAGTGACGAAAGACTAGCTCATATTCTTTCGGAATCTGGTCATCTTCAAATGAGAGGTGATCTTGATGTCTCAAACGACGCCGACAGCAAGAGTCCAAGTCGCGTCGGTTGCCCTAGTCCCTTTAGCAAGGATCGACTCGACAGCCAAAACCGTAGACTGAAGAAATACGAAAACGACGACATTCCCCAGGAAAAAGTTGTGAGGATTTATCAGGAGGAACTAGCCAAACTCATGGGACGAAGAGTCGATGATCTTCGTGGACCAAGGGACTTCCTTCAAAGCGCGATGTTTCCGCACTTTTTCAGTGGCAACCCTGGAATTCAGGGCATGGAACGCACTCAGGACGATATTCGTCTTGCTCTGGATGCTTACCATCGTGAACTTCAGAAACTGAATGTAGCCTCTGGTCAGACTCCTACGTTAGGCGGACTTCCACTTTCTGGATTACCCAGCATCCTACTTCAACAACAAGCTCTTCAGCAGCATCATCTGGCGACAAATGGTGGTGCTGGTGTTCAGGATTTAAGCTTAGGAAAACTGGATCCgagaaataaaatgatgaacgGAATCACTGAAgaggagaaggaaaaaatgGAAGAGGCAATGAGGCACGCTGGAAGCGCCTTCTCCTTAGTGAGACCTAAACAGGAATCCACGGGACCCCAGTCAACTCCTGGTGGTTCCAGTGCGAGTTCACCATTAGGCAATTCCATTCTTCCACCTGCGATGACGCCCAGTGAAGAATTCGGTGGTGCAGCAGCAGCCAGCCCTCTTCAGAGGATGGCTTCAATCACCAATAGCTTGATAAGTCAACCGTCCACTCCAACTCACCACTCGTCTAATCAAAGACCACTCAAAGCTGTTCTTCCTCCTATCACCCAACAGCAATTTGATATGTACAACAACCTGAATACCGAAGACATTGTCAAGAGGGTAAAAGAACAACTATCCCAGTATTCAATTTCCCAACGGCTCTTTGGAGAATCCGTATTAGGCTTATCTCAAGGTTCAGTCTCCGACCTCCTTGCAAGGCCGAAACCTTGGCATATGCTCACTCAAAAGGGACGAGAACCCTTCATCAGGATGAAGATGTTCTTGGAAGATGACAACGCGGTCCACAAGTTGGTTGCCAGTCAGTACAAAATCGCTCCAGAGAAGCTGATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGCGGCACACCCATGAAGCCAATGCCACCGACTAAACTAGTTCAGGAGCAGCTTCAGAATGCAGCGAAGGCTCAAGCAGCAGCGCAGGCTGCAGCTCAAGCCGCTGCTCAGCATCAGCAGGAGAGTCAGATGCAGCTTGGACCACCTCCTCAGAGTCCTCAGCATCCTCAGCATCCTCAACTTCCTCAGCTCCCTCAGCCACCACCACCGATGATGCTTACACCAACTGGTTCCCTCCATCCGCATGCTCAGCTCAACATGGAGCTTCAAAAGAAACAACATCAGCAACAACAGCAAATAAATTTGCACTCTCCTCATCATCAGATGGCTCCATCGTCCTTGAGAGCTCTCCATCCGCACATATCCCCCAGTGTCTACGAAATGGCTGCTCTTACGCAAGATCTCGACACCCAAACGATTACAACGAAAATCAAGGAGGCTCTCCTAGCGAATAACATAGGCCAGAAGATCTTCGGAGAAGCTGTCTTAGGTCTCTCGCAAGGATCAGTCAGTGAACTCCTCAGTAAACCAAAGCCTTGGCACATGCTGAGTATCAAAGGAAGGGAACCTTTCATCAGAATGCAGTTATGGCTTTCTGATGCACACAATGTAGACAGACTCCAAGCTCTCAAGAATGAACGACGCGAAGCGAACAAGAGGAGGCGCAGTAGTGGACCTGGACATGACAACAGCTCAGATACATCAAGTAACGACACTGCAGAATTCTACCACTCCGCATCTCCTGGACCTGGTCCAGCTTCAGCCAAGAAGCAACGGGTTCTCTTCAGTGAGGAGCAGAAGGAGGCTTTAAGGCTCGCTTTTGCGTTAGATCCCTATCCCAATGTCTCCACCATCGAGTTTCTCGCTGGCGAGTTAAGTCTTTCTTCCCGGACGATAACGAATTGGTTTCACAATCACCGGATGAGGTTAAAACAACAAGCTCCACATGGTCAGCCGGAGCCCCAGTCGCCGAGAGAACCTGGACAACCCTTCGACGCTGTTCACTTCAGGGTGCTGTTGAATCAAAAGCTCTTGGAGATCCAGAAGGAACGACTATGTCTTGGAAGCGTACCTCTGACCTATCCTCCTTACTTCAATCCCAACTTGGCTGCTCTTGTTGGAAATGCTTTGAAGGAACAGTGCTCCGGCCTTGATCTTTCGATGGGATCCTTGAAGAGGGAACCTATGCAAGAATTCGAGGACGACGACGGTGATGACGGCATGAGCAATTTGGGAAGTGAAGACTCCGAAGGTTCTGCGGGGAGTATAAAGCGAGAACAAGCGGAAACCCCTGCCCCCACGACTGGCAGGTCGAGTAGGCGGAAACCCGCAGCTCCTCAGTGGGTGAATCCAGAGTGGCAAGAGCCAGCGAGGACCGGGGACGAAGTCATCATCAATGGTGTTTGTGTGATGCAGACCGATGATTACGGCGTCAAGAGGGAAAACGAGGAGACCGTCAGGGTTGAGCCAACTCCTGTTCAGGACAGATTTGAGGAAGACGCCCAGAGTGATGTTTCTTCAGTCTCAGCCAACAATGCACCTGACAGGGATAGTCCGCTTCCGAGTCCAAAATCGGGGCATACTAGTCCCATAACGTCTCCAAGACCACCTTCGGTTCAGCAGACGCAGCAGTCCACGGAAGAGAGTCCAAAGGAGGTCGTGAAACACGAACCCGAAGAGACGTGGGATTATTAA
Protein Sequence
MLMWLVMDGPISQLVEEVSRLQQSLQRLQETSAQATARLEEELEARRQHISRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERSKALQQAENLKPPSTPDTLGGLSSPLQRATTASPHGVVNAPPSSLVSSQTTLPTRSTPTPSSATSTSSSLLFPPPLQNVETFGSFLGEEIVANWRRSLEKTIMSQQQPQQTSQASQQQQTQSTVLGLHPPSTPSSLNHLPSPTDPISSSNTPAKSSTPLGTTLGSLDATEKASTPVPGHETPAPPTPSSTALTSPPATLPPPTSTADSTVNGGSIGSLSSLGSLANLVPPPKSPAEESCHNNNNSHHLANNNIGALSVLDSLKGPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLNIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKEYVSGKEQGMPAFARGPQDGPPDMSDERLAHILSESGHLQMRGDLDVSNDADSKSPSRVGCPSPFSKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVDDLRGPRDFLQSAMFPHFFSGNPGIQGMERTQDDIRLALDAYHRELQKLNVASGQTPTLGGLPLSGLPSILLQQQALQQHHLATNGGAGVQDLSLGKLDPRNKMMNGITEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPSEEFGGAAAASPLQRMASITNSLISQPSTPTHHSSNQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQESQMQLGPPPQSPQHPQHPQLPQLPQPPPPMMLTPTGSLHPHAQLNMELQKKQHQQQQQINLHSPHHQMAPSSLRALHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHSASPGPGPASAKKQRVLFSEEQKEALRLAFALDPYPNVSTIEFLAGELSLSSRTITNWFHNHRMRLKQQAPHGQPEPQSPREPGQPFDAVHFRVLLNQKLLEIQKERLCLGSVPLTYPPYFNPNLAALVGNALKEQCSGLDLSMGSLKREPMQEFEDDDGDDGMSNLGSEDSEGSAGSIKREQAETPAPTTGRSSRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKRENEETVRVEPTPVQDRFEEDAQSDVSSVSANNAPDRDSPLPSPKSGHTSPITSPRPPSVQQTQQSTEESPKEVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_00979955;
80% Identity
iTF_00979955;