Mcra016662.1
Basic Information
- Insect
- Melieria crassipennis
- Gene Symbol
- nfxl1
- Assembly
- GCA_963668005.1
- Location
- OY764962.1:118652282-118655589[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 2.8e+04 -8.1 6.4 15 19 170 174 169 174 0.82 2 20 0.11 1.5e+03 -0.1 0.2 4 10 205 211 204 213 0.94 3 20 6.2e-09 8.7e-05 23.1 14.4 1 18 219 235 219 236 0.98 4 20 1.5 2.1e+04 -3.7 1.1 5 10 261 266 261 266 0.91 5 20 3.7e-05 0.52 11.0 15.4 3 19 274 291 272 291 0.91 6 20 0.46 6.4e+03 -2.1 0.9 6 10 316 320 315 320 0.93 7 20 5.2e-09 7.2e-05 23.3 14.3 1 19 326 344 326 344 0.99 8 20 0.91 1.3e+04 -3.0 0.5 1 7 369 374 368 376 0.49 9 20 1.8e-06 0.025 15.2 10.1 1 18 379 396 379 396 0.96 10 20 0.31 4.4e+03 -1.5 0.4 1 5 406 410 406 415 0.75 11 20 2 2.8e+04 -5.0 2.3 5 10 420 425 420 425 0.91 12 20 0.00016 2.2 9.0 15.6 1 18 431 449 431 450 0.94 13 20 6e-08 0.00084 19.9 14.4 1 18 459 476 453 477 0.86 14 20 0.16 2.3e+03 -0.6 11.4 9 19 522 532 513 532 0.90 15 20 0.031 4.4e+02 1.7 6.1 3 12 545 554 535 554 0.83 16 20 0.88 1.2e+04 -3.0 1.4 6 10 610 614 609 614 0.88 17 20 2.6e-06 0.036 14.7 3.7 1 11 620 630 620 634 0.91 18 20 0.0088 1.2e+02 3.4 15.7 3 18 660 675 659 676 0.94 19 20 2 2.8e+04 -5.0 1.9 9 13 682 686 681 686 0.72 20 20 9.9e-05 1.4 9.7 13.5 1 17 727 745 727 747 0.86
Sequence Information
- Coding Sequence
- ATGTCCGACGCCACCAATCCTTGGAAGGTCCCCAAGAAATCGAACGTGCAACCATCTAAGACCAACGTCTCCAAACGTTTTGACGAAGTCCATGCGCGTAACATTGCTGCAGCGAAGAAAATCGTAGAGAAGTATGCGTCCAGCTCGgatgaagatgaagaagaacTGGATGAATGCAATATACTTAAGACGCTGTACCAGCACTACCAATCAACCGGCGCTGGGGACAGTGCACCACAACTACAAAGAACCGCTGCTTTTCTGGAAAATGCATTGCATTCCGGTTCGGCCACTTGCCTAATTTGCATAGGCAGTGTCCGACGGGCCGATGCCATCTGGACTTGCAAACATTGCTACTGCTTTTTTCACTTAAACTGCATACGGCGCTGGGCCAACGATAGCATCGCGCAATTGAAGGCGCAAACTGGCACACCGATCGAGCACGGCTACTATAACAATCTGGGCGAATATGTGCCGCCAAAACAAACGCGCCCGCTGCACTGGTGCTGTCCGCAATGTCGTAAAGAATATGAGCCCACCGATCGGCCCTCCGTGTACGAATGCTTCTGTGGCAAGGAAGTGGATCCACAGCCGGCGCCCTTTCTACTGCCCCACTCCTGTGGTGAAATTTGTGGTAAACAGCTACAGCCGAGGTGCGGGCATACGTGCATGCTGCTCTGCCATCCTGGACCATGTCCACCGTGTGCACAATATGCGGTCAGCAGTTGCCAGTGCGGCAAGTCGCCGCAGAAGTCTGTCCGTTGCGTGGACAAGAATTGGAAATGCGATCGTAAGTGTACCCTACAATTACGTTGCAAGGAGCACGTGTGCAATCAGCCATGTCACAAGCCAGGTGATTGTCCGCCTTGCAGTAGCACCAGCATGCAGCCATGTGAATGCGGTCGTGAGGTGCAAAAACGCAGCTGCTCAGAGTTGAAATGGCATTGCGAGAAAgTTTGTGGGCTGAAGTATGCGTGCGGCATACACGTATGCAAGAAGGTCTGTCACTCGGGTCCCTGTGGAGAGTGCCCACTGGGGTTGCCGCGTTCGTGTCCCTGTGGAAAAACTaaaaaaattggACCTTGCAGCGAAATCATTGACACATGCGGCgacacctgtcagaagcttctGCCGTGTAGCATTCACTCATGCACACAGCGCTGCCATCGAGGCGACTGTAATTTGTGCATTGTCATCACCAAGAAGAAATGTCGTTGCGGTATGCACGAAAAGGAGTTGCCCTGCTGGAAGAGCTTCACCTGTGAAACGAAATGCAAATTGATACGCGACTGCGGCAAGCACGCCTGCAACAAGAAGTGCTGTGACGGCCGTACATGTCCGCCATGCGACAAAGTATGCGGCAAATCTTTATCGTGCAGGAAACACAAATGCCAGTCAATCTGCCATGAAGGACCGTGCTATCCCTGTGGTCAGCAGTCTCAAGTCAACTGTCGCTGCGGGAAAACGTCAAAGCGTGTGCCCTGTGGGCGTGAGCGCACTGCACGGATTATGTGCATGGAGTTGTGTCGCATTCCATCAAAATGTCACCATCCCACAAAACATCGTTGTCACAAAAACGAATGCCCACCGTGCAGTCAAAAGTGTGGTCAACCCAATGACACAACCGGCTGCCAGCACATATGTGAGGCCAAGTGTCACACCGCCATTAAAGTGTTCAAAAACAGCAATAACGCAAATTGGTTGCCGGGCAAAAAGTTCGAATACAAAAAGCTGCCGCATCCGCCATGTGAGCAAATAGTAACCGTGACCTGCATCGGTGGTCACGAAATTGCCGATTGGCCCTGTCACAACTCGAAGCCGACGTCGTGCCAACGCAAGTGCAATCGGTTATTGCGCTGCGGTAATCATAGATGTGAAATAATCTGTCATGCAGTCGGTGACATTAAGGATATGAAGGAGCAGCCGGGCTGTGCCAGCTGTCAGGAAGGCTGCAGCATTCCACGCCCTCCAGGCTGCATACATGCCTGCTCACGTCCTTGCCACTTGCCACCGTGCCATCCTTGCGATAAGCTCATCAGAGCCAAATGTCATTGTGGGCTGACACAGGTCATCTACAGATGTGCTGAATTCTTTAGCACCGAAGGTTCCGAAACAGAGATTTTGCAGCGGCAGGAACGCTTGAAAGGCTGTGGCAATCGCTGCCTTAAAGATTTTCCCTGCGGCCATCGTTGTGTTACGGCCTGCCATCCTGGCAAATGCCCCAATCCAGAGCAGTGTCGGAAGAAAGTGCGTATTTTTTGCGAGTGCAAACGTTTAAAAGTCGAAGTGCCCTGCGATAGACATCGTGCCGGCTTGAGTGCAATTCCCTGTGATGAATTTTGCAATGAGACGCGAGCCAAACTGACAGCTGTTCAAAAACAGGAAGCCGAAAAAATGCGACTGCAGGAAGAGGCAAAGAATCGAATGGAAGTGGAACAATTCGAGAAAAAATTTGGAAAGCGCAAACACAAAGAACGCAAAGTTATGACCGAGCAGCCAAAACCACATATCAACTGGAAACTGGTTTCCATCTATGCGGGTATTGTAGCTGCCATACTGTTAGCAGTTGCGGTAGCATTTTATGCCGAAAGCTAA
- Protein Sequence
- MSDATNPWKVPKKSNVQPSKTNVSKRFDEVHARNIAAAKKIVEKYASSSDEDEEELDECNILKTLYQHYQSTGAGDSAPQLQRTAAFLENALHSGSATCLICIGSVRRADAIWTCKHCYCFFHLNCIRRWANDSIAQLKAQTGTPIEHGYYNNLGEYVPPKQTRPLHWCCPQCRKEYEPTDRPSVYECFCGKEVDPQPAPFLLPHSCGEICGKQLQPRCGHTCMLLCHPGPCPPCAQYAVSSCQCGKSPQKSVRCVDKNWKCDRKCTLQLRCKEHVCNQPCHKPGDCPPCSSTSMQPCECGREVQKRSCSELKWHCEKVCGLKYACGIHVCKKVCHSGPCGECPLGLPRSCPCGKTKKIGPCSEIIDTCGDTCQKLLPCSIHSCTQRCHRGDCNLCIVITKKKCRCGMHEKELPCWKSFTCETKCKLIRDCGKHACNKKCCDGRTCPPCDKVCGKSLSCRKHKCQSICHEGPCYPCGQQSQVNCRCGKTSKRVPCGRERTARIMCMELCRIPSKCHHPTKHRCHKNECPPCSQKCGQPNDTTGCQHICEAKCHTAIKVFKNSNNANWLPGKKFEYKKLPHPPCEQIVTVTCIGGHEIADWPCHNSKPTSCQRKCNRLLRCGNHRCEIICHAVGDIKDMKEQPGCASCQEGCSIPRPPGCIHACSRPCHLPPCHPCDKLIRAKCHCGLTQVIYRCAEFFSTEGSETEILQRQERLKGCGNRCLKDFPCGHRCVTACHPGKCPNPEQCRKKVRIFCECKRLKVEVPCDRHRAGLSAIPCDEFCNETRAKLTAVQKQEAEKMRLQEEAKNRMEVEQFEKKFGKRKHKERKVMTEQPKPHINWKLVSIYAGIVAAILLAVAVAFYAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -