Basic Information

Insect: Melieria crassipennis
Gene Symbol: -
Assembly: GCA_963668005.1
Location: OY764961.1:20423814-20427445[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.39 37 5.7 0.3 2 23 259 281 258 281 0.90

2 13 0.095 8.9 7.6 1.3 1 23 413 436 413 436 0.90

3 13 0.082 7.8 7.8 2.4 1 19 490 508 490 510 0.92

4 13 0.3 28 6.0 0.1 1 23 540 563 540 563 0.86

5 13 6.7 6.4e+02 1.8 2.1 2 19 618 635 617 638 0.87

6 13 0.00056 0.052 14.6 0.7 1 23 660 683 660 683 0.97

7 13 0.042 3.9 8.7 0.1 1 20 730 749 730 751 0.95

8 13 0.0014 0.13 13.3 0.0 1 23 833 856 833 856 0.97

9 13 0.017 1.6 9.9 0.9 1 23 904 927 904 927 0.97

10 13 0.0038 0.36 12.0 0.6 1 23 933 955 933 955 0.98

11 13 0.001 0.094 13.8 2.9 1 23 992 1015 992 1015 0.95

12 13 0.00012 0.012 16.7 0.4 1 23 1025 1047 1025 1047 0.99

13 13 0.0019 0.18 13.0 0.8 2 23 1056 1078 1055 1078 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.39	37	5.7	0.3	2	23	259	281	258	281	0.90
2	13	0.095	8.9	7.6	1.3	1	23	413	436	413	436	0.90
3	13	0.082	7.8	7.8	2.4	1	19	490	508	490	510	0.92
4	13	0.3	28	6.0	0.1	1	23	540	563	540	563	0.86
5	13	6.7	6.4e+02	1.8	2.1	2	19	618	635	617	638	0.87
6	13	0.00056	0.052	14.6	0.7	1	23	660	683	660	683	0.97
7	13	0.042	3.9	8.7	0.1	1	20	730	749	730	751	0.95
8	13	0.0014	0.13	13.3	0.0	1	23	833	856	833	856	0.97
9	13	0.017	1.6	9.9	0.9	1	23	904	927	904	927	0.97
10	13	0.0038	0.36	12.0	0.6	1	23	933	955	933	955	0.98
11	13	0.001	0.094	13.8	2.9	1	23	992	1015	992	1015	0.95
12	13	0.00012	0.012	16.7	0.4	1	23	1025	1047	1025	1047	0.99
13	13	0.0019	0.18	13.0	0.8	2	23	1056	1078	1055	1078	0.94

Sequence Information

Coding Sequence: ATGAACGAACCGTCCAGTGCAGCAATCACAGTACCAGCATTCGGCATTAAACAAGAAATCACAGAGCACAATGCGGACGCCGAGGCTGCTGCTGAGAAGGAGCAGTCGGACTGCAATGCCGGGACCATTGAGATCGAGAACAATTGGGCAACTTACATCAAACAGGAAGAGGAGTGTATCATCGATTGCAGCGAGGATGAGTTCATATGGGAGAATGCAGACAACGAGCAGGCATACAACATTTACGACGTGCACGAATACGACGCAGAACAGCCAGAAAAAGAGCATTGTCCTACTACCCGTTCGAGGGCGAATATTACAGCAGAAAAAGAATTGTCATCGTGCACAGACGACGAGATGTTTAGTGGCAGTGAAACTGATTACTGCCAAAGCGAGGAATCATCCGACGATGAGTATGAGCTAGCACCAAAAAAACCAGTTCCTAACCGTAAAAGGAAGAAACAGTTGACGCCCATTGCAACAGCAACCCCCGCCAAGCGCGGCAGGCCACGCAAGATTATCAACGTTCAAGACGAAAAACCCAAAATCCGAAAGCCAGGCTTGCAGCAAGTTGTTATGCAAAAGATGAATGAAATTGCAAAAGTTGTCGAGATTTACAGAAATCCCAACAAACCGCCGCCGGCTGCCATGGCTCACACTCGGTCGCGTGGACCGAGCGTGAACCATGCGTCCGGCGCTGCGTCGCTGTCGACGCAGTTGCAAAATTCGCGAATCCAACAAGACGCTTTCCTGCGAATAAACTTTCTAAACTGGATTTGCCCTGTCTGCGACATCGATTGCCAGTCCAACTACAAGTGGCGTCAGCACCTGGACGAAATGCACCAGCTGCTCGAGCGCGAGAATCTGAATATGGAGTACATGTCGAACAGCAGGGCACGCTGTCGGCAGTGCTGCGATGAAATGCCGTCGAAATTTTGGACTGTGCTTAAGCACAAAGTGACACACCTGCCGCATAGTGATTTTCTCATGTGCAAATTGTGTCACTGGCGCATAGGGAGCATGCGCGAAGCGCTGCTGCATCTGCGTCGAGAGCACGCGGACGATACGATCAAGCCTCCTCCTGCCTCCTGCCCGCCTCCTGAGGCCAGCGTGAGTGTAAAGCTGGAATCGAACGTATGCATCTGCCCCTTCTGTCAGCAAAGCTTCCTTGCAATGACGCCCATGATAGCGCACATCAAGAGTTTGCATAAAAGCGCGAATGACGCCAAGGCTGCGTACTTGTGCCCCAAATGTGGACAGCGGATTCAAACGAAGTCGCGCTTTCACAAGCATATTGTTGAGGAGCACAACTACGACTCGGTCGAGAAACTGCGCTTTGTCGAGCTTGAAGTGGCATGCAAAAGCACGGCCAAGGCGTCTAAATGCCTTCAGTGTGGGATGATTGAACCGAAATCAATGCCGCTCAAAATGCGGGAGCACGCGCTGAGCCACAGCGGCGTTAAGTGCTTCCTGTGCGTCCACTGCGAGCTCAGCTTCGAAAACAGCAAAGAATTGCGCGTTCACTTTTGCGACGAGCTGCGGCAGAAGTTCCTGTTTCCGTGTAATTTGGATGTAGCACATACTAAGGGGAAGCatAAGAAACCCAGATTTATCCGGTACGTTTGCCCCATGTGTGGCGAGGAGACCGACAGCAAAACCAAACGTTCTGAGCATGAGGAGTCCGAGCACAGCATGGGTACACCGGAAGGCTTAAACTTTGCCTTGGTTGAAGGAGATGGTGACGACGAAAGCGGGGCCACGTACAAGTGCACTGTGTGTGAGAAGAAGATGGCGCTGAATGTGGCTGTGATGTACACGCACGCCGTTTCACACATGCCGCATAGTCGCTGGAAATGTGGCAGATGTAATGTGCCGTTTCGTCGACTGCAGCATACGTATGTTCACAATTGTACCGTGGCCGTGAAGCGTCCGAGCAATGGCCATGTTTATTTGCATAAGTACGAATATATGATGATACATGTCTGTCCCGTGTGCAATGCAGATTTTGGGCGTCGGCGCCAGTGGTGGCGACATTTGAGGAAAAATCATGCGCTAAATACATTGGCCGACATGCGCATGGAGGCGGTGGACACGCACTTCGTGCGCTGTTTGGATTGCAACGCTCTGGTCCGAAGTCGTTACACTAACAGGCGCGAGCACCGATTTAAACATTTGGAGTACAAGCCGTACCGATGTAGAAGCTGTGCGAAGACCTTCGACACACTTAGCGCCATATCGCGTCACATCGTCGTCTGCAGTAAGGGCGCCGGCATTAATAAGGTCAAAAATATGCGCCGATTGAGCAAACTACATGGTCACATTATGACTGCGCATGATGACGAGCTAAACCGTTTGGAAGCAGAAGCTGTTGAATTGCCAAAAACAGAAGATCCATTGGAGAGTGCTGACAACGACTTGGTAGAGACATCAAAAACGCGAATTAGAGTTGAGATTGCCAATTCGCCAGTGTACAGCCAGTTTGCCAAATACATTTCGTACGCTTGTCCCGAATGCAACGAGCCGCTTCCAACCGAAAGCGATTGGCAAGCGCACATCAATAGCCTTCATAGCTTTTTCAACGAAGAGGAAATGCATCAAGAGTTCACTCTCGACGGCGACTTGGTATGCACGGTTTGCGGCGTCAAAATCTACCCTGCTAGTTCATACCAGCAACAACGTCACAAGCTGACGCACATGCCATACAAGTCATTCATCTGTACGCTCTGTACGCAGCGCTCCAACACGATTAGCGTACTCATACAGCACATGCGTCGTAAGCACTTCATGCCCGGTCAGTACAAGTGCGAGGTGTGCGCACAGGTATTTGGCACTTCGTACGATCGCTACAAGCATATCAAGGAGCACGATCCCGCCGACTGGCCGCCGTACATGTGTCGCATTTGCTGTGCAGTGCTGTGTAGTAAATGGGCGCTGCTGGGTCACTTGGACACGCATGACCCAAACCGACAAATGTTTCCGTGTGCAACATGCAACTGCGAGTACTCGAACCCGAGAGAGCTGCGTCGCCACATGCAAGCCTGCCATCCGGGCGCAGCCGATCCTTTCGAGAAATACAAATGTGCTGTTTGCGAGGAGAATTGTATAAGCTCGGATGCGTTGACTGCCCACATGCAGCGGCACGATGCTAGCGAAATACCTAAAACTGTTTGTCCGATCTGTGGCAAGACATTCAAGGTGGCCAAATCGTGTGCGGTACATAAGCGGTCCATACATAAGACTGCTCCTATATTGCCAAACAACTCCGGTGCGAATGTAATCGAATCAACAGGCACACACTGTAACCGTCCGAAGAAACCAGTACTCAGCAAAACAAACGGAAAGGCAGCAATGCCGTGCAGTAGCACTGAGTCTAAAGATGAGCGGTCCATGCATAAGCCTGCTCGCACCACGCCAGACAATTCGCATGCGAATGTAAAGGAATCAATAGGCAAGAAGGGTAACAGGCGGAAAAAACCAATAATGCGGAAAGCAAATGGAAAGGCAGCATTGCCGTGCACTAGTACTGAGTCTAGAGATGAGGACCCGGATGTTGAGATGATTGTGTCAAATGAAAATTGA
Protein Sequence: MNEPSSAAITVPAFGIKQEITEHNADAEAAAEKEQSDCNAGTIEIENNWATYIKQEEECIIDCSEDEFIWENADNEQAYNIYDVHEYDAEQPEKEHCPTTRSRANITAEKELSSCTDDEMFSGSETDYCQSEESSDDEYELAPKKPVPNRKRKKQLTPIATATPAKRGRPRKIINVQDEKPKIRKPGLQQVVMQKMNEIAKVVEIYRNPNKPPPAAMAHTRSRGPSVNHASGAASLSTQLQNSRIQQDAFLRINFLNWICPVCDIDCQSNYKWRQHLDEMHQLLERENLNMEYMSNSRARCRQCCDEMPSKFWTVLKHKVTHLPHSDFLMCKLCHWRIGSMREALLHLRREHADDTIKPPPASCPPPEASVSVKLESNVCICPFCQQSFLAMTPMIAHIKSLHKSANDAKAAYLCPKCGQRIQTKSRFHKHIVEEHNYDSVEKLRFVELEVACKSTAKASKCLQCGMIEPKSMPLKMREHALSHSGVKCFLCVHCELSFENSKELRVHFCDELRQKFLFPCNLDVAHTKGKHKKPRFIRYVCPMCGEETDSKTKRSEHEESEHSMGTPEGLNFALVEGDGDDESGATYKCTVCEKKMALNVAVMYTHAVSHMPHSRWKCGRCNVPFRRLQHTYVHNCTVAVKRPSNGHVYLHKYEYMMIHVCPVCNADFGRRRQWWRHLRKNHALNTLADMRMEAVDTHFVRCLDCNALVRSRYTNRREHRFKHLEYKPYRCRSCAKTFDTLSAISRHIVVCSKGAGINKVKNMRRLSKLHGHIMTAHDDELNRLEAEAVELPKTEDPLESADNDLVETSKTRIRVEIANSPVYSQFAKYISYACPECNEPLPTESDWQAHINSLHSFFNEEEMHQEFTLDGDLVCTVCGVKIYPASSYQQQRHKLTHMPYKSFICTLCTQRSNTISVLIQHMRRKHFMPGQYKCEVCAQVFGTSYDRYKHIKEHDPADWPPYMCRICCAVLCSKWALLGHLDTHDPNRQMFPCATCNCEYSNPRELRRHMQACHPGAADPFEKYKCAVCEENCISSDALTAHMQRHDASEIPKTVCPICGKTFKVAKSCAVHKRSIHKTAPILPNNSGANVIESTGTHCNRPKKPVLSKTNGKAAMPCSSTESKDERSMHKPARTTPDNSHANVKESIGKKGNRRKKPIMRKANGKAALPCTSTESRDEDPDVEMIVSNEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00979721;
90% Identity: iTF_00979721;
80% Identity: -