Mcra001287.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melieria crassipennis
Gene Symbol
Znf335
Assembly
GCA_963668005.1
Location
OY764961.1:20369707-20373641[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.59 56 5.1 0.9 2 23 256 278 255 278 0.90
2 16 8.4 7.9e+02 1.5 0.5 2 23 378 400 377 400 0.74
3 16 0.041 3.9 8.7 0.7 1 23 410 433 410 433 0.90
4 16 0.09 8.5 7.7 2.4 1 19 487 505 487 507 0.92
5 16 0.33 31 5.9 0.1 1 23 537 560 537 560 0.86
6 16 0.001 0.097 13.8 1.0 1 23 665 688 665 688 0.96
7 16 0.0012 0.12 13.5 0.1 1 20 735 754 735 756 0.95
8 16 1.1 1e+02 4.3 1.5 3 23 829 851 827 851 0.71
9 16 0.65 61 5.0 1.3 1 23 857 880 857 880 0.97
10 16 0.0043 0.41 11.8 0.0 1 23 935 958 935 958 0.97
11 16 0.57 54 5.1 1.4 1 23 1005 1028 1005 1028 0.97
12 16 0.0047 0.44 11.7 0.5 1 23 1034 1056 1034 1056 0.98
13 16 0.13 12 7.1 0.6 1 23 1064 1086 1064 1086 0.97
14 16 0.0038 0.36 12.0 2.8 1 23 1093 1116 1093 1116 0.95
15 16 0.00014 0.013 16.6 0.4 1 23 1126 1148 1126 1148 0.99
16 16 0.0021 0.19 12.8 0.8 2 23 1157 1179 1156 1179 0.94

Sequence Information

Coding Sequence
ATGAACGAATCGTCCAGTGCAGCAATCACAGTACCAGCATTCAGCATTAAACAAGAAATCACAGAACGCAATGCGAGGGCCGAGGGTGCTGCATGCTGCGGAGTTAAAGTTGAGAAGGAGCAGTTGGACTGTAATGCTGGGACCATTGAGATCCAGAACAATTTGGCAACTAACATCAAGCAGGAGGAGGAGTGTATCATCGATTGCAGCGAGGATGAGTTCACATGGGAGAATGCCGACAACGAGCAGGCATACAACATTTACGACGTGTACGAATACGACGCAGAACAGCCGCAAAAAGAGCCTTGTCCTACTACTACCCTTTCGAGGGCGAATATTACAGCAGAAAAAGAATTGTCATCGTGCACAGACGACGAGATGTTTAGTGGCAGTGAAACTGATTACTGCCAAAGCGAGGAATCATCCGACGATGAGTATGAGCTAGCACCAAAAAAACCAGTTCCTAACCGTAAAAGGAAGAAACAGTTGACGCCCATTGCAACAGCAACTCCCGCCAAGCGCGGCAGGCCACGCAAGATTATCAACGTGCGAGACGAAAAACCCAAAAACCGAATGCCGAAAGATTTGCAGCAAGTTGTTATGCAAAAGATGAATGAAATTGCAAAAGTTGTCGAGATTTACAGAAATCCCAACAAACCGCCGCCGGCTGTCATGGCTCACGCTCGCTCCACGCACGCGTCGACGCAGTTGCAAAATTCGCGAGTCCAACATGACGCTTTCCTGCGAATAAACTTTCTAAACTGGATTTGCCCTGTCTGCGACATCGATTGCCACTCCAACTATAAGTGGCGTCAGCACCTGGACGAAATGCACCAGCTGCTCGAGCGCGAGAATCTGAATATGGAGTACCTGTCGAACAGCAGGGCACGCTGTCGGCAGTGCTGCGATGAAATGCCGTCGATCTTTTGGACCGTGCTTAAGCACAAAGTGACACACCTGCCGCATAGTGATTTTCTTATGTGCAAATTGTGTCACTGGCGCGTAGGGAGCATGCGCGGAGCGCTGATGCATCTGCGGCGAGAGCACGCGGACGATACGATCAAGCCTCCTCCTGCCACCTGCCCGCCTCCTGAGGCCAGCGTGAGTGTGAAGTTGGAATCGAACGAATGCATCTGCCCCTTCTGTCAGCAAAGCTTCCTTGCACTGACGCCCATGATGGCGCACATCAAGAGTTTGCATAAAAGCGTGAATGCCGCCAAGGCTGTGTACTTGTGTCCCGATTGTGGACAGCGGATTCAGACGAAGTCGCGCTTTCACAAGCATATTGTTGAGGCGCACGACTACGACTCGGTCGAGAAATTGCGCTGTGTCGAGCTTGAAGTGGCTTGGAACAGCACGACCAGGGCTTTTAAATGCCTTCAGTGTGGGATGATTGAACCGAAATCCGCGCCGGTCAAAATGCGGGAGCACGCGCTGAGCCACAGCGGCGTTAAGTGCTTCCTGTGCGTCCACTGCGAGCTCAGCTTCGAAAACAGCAAAGAATTGCGCGTTCATTTTTGCGACGAGCTGCGGCAGAAGTTCCTCTTTCCGTATAATTTGGATGTAGCACATACTAAGGGGAAGCatAAGAAACCCAGATTTATCCGGTACGTTTGCCCCATGTGTGGCGAGGAGACCGACAGCAAAACCAAACGTTCTGAGCATGAGGAGTCCATGCACAGCATGGGTACACCGGGAGGCTTAAACTTTGCCTTGGTTGAAGGAGATGGTGAGGACGAAAGCGGGGCCACGTATAAGTGCACTGTGTGTGAGAAGAAGATGGCGCTGAATGTGGCTGTGATGTACACGCACGCCGTTTCACACATGCCGTATAATCGCTGGAAATGTGCCAGATGTAATGCGCCGTTTCGTCGACTGCAGCATACGTATTTTCACAATTGTACCGTGGCCGTGAAGCGTCCGAGCAAATATCCGACCAAACGCCGGACCAATGATCATGTTTATTTGCATAAGTACGAATATATGATGATACATGTCTGTCCCGTGTGCAATGCAGATTTTGCGCATCGGCGCCAGTGGTGGCGACATTTGAGGGAAAATCATGCGCTAAATGCATTGGCCGACATGCGCATGGAGGCGGTGGACAAGCGCTTCGTGCGCTGTTTGGATTGCAACGCTCTGGTCCGAAGTCGTTACACTAACAGGCGCGAGCACCGATTTCAACATTTGGGGTACAAACCGTACCGATGTAAAGGCTGTGCGAAGACCTTCAACACACTTAGCGCCATATCGCGTCACATCGTCGTCTGCAATAAGGGCGCTGGCATTAGTAATGGAATGCCTGTGCGCGCAAAGGATCAACCGGCACCACCAGCACGGTTTGAGCACAAGTTTGTGAAAATCACATGTCCAATATGCGCCGATGTAGCGTTCACAACATTACCAGAACAGTTGGCGCACTTTCGCAGCGTCCACAATTACTTCAGCGACAAGTTCACTCTGCATGCTAATGGCTCCATGAACTGTCAGGTGTGTGGCAAGTACTTTCAAGACTCCGACAAAGTGGCCATGGTGAAGCATCAGCGCAGCCACTTTGTGAAGAACTGCTTTCATTGTCTGCAGTGCGATTCCACAGCGCCCACCTTAAGCAAACTACATGGTCACATTATGACTGCGCATGATGACGAGCTAAACCGTTTGGAAGCAGCAGCTCCAATTCAACCTGAAACAGAAGATCCATTGGAGAGTGCTGACAGCGACTTGGTACAGGGATCAATAACGCGAATTGCAGTGAAGACTGCCAATTCGCCAGTGTACAGCCAGTTTGCCAAATACATTTCGTACGCTTGTCCCGAATGCAACGAGCCGCTTCCAACCGAAAGCGATTGGCACGCGCACATCAATAGCCTTCATAGCTTTTTCAACGAAGAGGAAATGCATCAAGACTTCACCCTCGACGGCGAATTAGTATGTACGGTTTGCGGCGTCAAAGTCAACCAAGCTATTTACCACCAGCAACGTCACAAGCTGACGCACATGCCATACAAGTCATTCATCTGTACGCTCTGTACGCATCGCTCCAACACGATTGGCGTGCTCATACAGCACCTGCGTCGTAGGCACTTCATGCCCGGTCAGTACAAGTGCGAGGTGTGCGCGCAGGTATTTGGGACTTCGTACGAGCGCTACAAGCATATCAAGGAGCACGATCCCGCCGACTGGCCGCCGTACATGTGTCGCATTTGCTGTGCAGTGCTGCGTACTAAATCGGCGCTGCTGGTTCACTTGGACACGCATGACCCAAACCGACAAATGTTTCCGTGTGCAACATGCAACTGCGAGTACTCGAACCCGAGAGAGCTGCGTCGCCACCTGCAAGCCTGCCATCCGGGCGCAGCCGATCCTTTCGAGAAATACAAATGTGCTGTTTGCGAAGAGAATTGTATAAGCTCGGATGCGTTGACTGCCCACATGCAGCGGCACGATGCTAGCGAAATACCTAAAACTGTTTGTCCGATCTGTGGCAAGACATTCAAGGTGGCCAAATCGTGTGCGGTACATAAGCGGTCCATACATAAGCCTGCTCCTATATTGCCAAACAACTCCGGTGCGAATGTAATCGAATCAACAGGCACACACTGTATTCGTCCGAAGAAACCAGTACTCAGCAAAACAAACGGAAAGGCAGCAATGCCGTGCAGTAGCACTGAGTCTAAAGATGAGCGGTCCATACATAAGCCTGCTCCCATCACGCCACACAGTTCGAATGCGAATGAAAAGGAATCAATAGGCAAGAAGTTTAACAGTCGGAAAAAGCCAATAATCCGGAAAGCAAATGGAAAGGCAGCATTGCCGTGCACTAGTACTGAGTCTAGAGATGAGGACCCGGATGTTGAGATGATTGTGTCAAATGAAAATTGA
Protein Sequence
MNESSSAAITVPAFSIKQEITERNARAEGAACCGVKVEKEQLDCNAGTIEIQNNLATNIKQEEECIIDCSEDEFTWENADNEQAYNIYDVYEYDAEQPQKEPCPTTTLSRANITAEKELSSCTDDEMFSGSETDYCQSEESSDDEYELAPKKPVPNRKRKKQLTPIATATPAKRGRPRKIINVRDEKPKNRMPKDLQQVVMQKMNEIAKVVEIYRNPNKPPPAVMAHARSTHASTQLQNSRVQHDAFLRINFLNWICPVCDIDCHSNYKWRQHLDEMHQLLERENLNMEYLSNSRARCRQCCDEMPSIFWTVLKHKVTHLPHSDFLMCKLCHWRVGSMRGALMHLRREHADDTIKPPPATCPPPEASVSVKLESNECICPFCQQSFLALTPMMAHIKSLHKSVNAAKAVYLCPDCGQRIQTKSRFHKHIVEAHDYDSVEKLRCVELEVAWNSTTRAFKCLQCGMIEPKSAPVKMREHALSHSGVKCFLCVHCELSFENSKELRVHFCDELRQKFLFPYNLDVAHTKGKHKKPRFIRYVCPMCGEETDSKTKRSEHEESMHSMGTPGGLNFALVEGDGEDESGATYKCTVCEKKMALNVAVMYTHAVSHMPYNRWKCARCNAPFRRLQHTYFHNCTVAVKRPSKYPTKRRTNDHVYLHKYEYMMIHVCPVCNADFAHRRQWWRHLRENHALNALADMRMEAVDKRFVRCLDCNALVRSRYTNRREHRFQHLGYKPYRCKGCAKTFNTLSAISRHIVVCNKGAGISNGMPVRAKDQPAPPARFEHKFVKITCPICADVAFTTLPEQLAHFRSVHNYFSDKFTLHANGSMNCQVCGKYFQDSDKVAMVKHQRSHFVKNCFHCLQCDSTAPTLSKLHGHIMTAHDDELNRLEAAAPIQPETEDPLESADSDLVQGSITRIAVKTANSPVYSQFAKYISYACPECNEPLPTESDWHAHINSLHSFFNEEEMHQDFTLDGELVCTVCGVKVNQAIYHQQRHKLTHMPYKSFICTLCTHRSNTIGVLIQHLRRRHFMPGQYKCEVCAQVFGTSYERYKHIKEHDPADWPPYMCRICCAVLRTKSALLVHLDTHDPNRQMFPCATCNCEYSNPRELRRHLQACHPGAADPFEKYKCAVCEENCISSDALTAHMQRHDASEIPKTVCPICGKTFKVAKSCAVHKRSIHKPAPILPNNSGANVIESTGTHCIRPKKPVLSKTNGKAAMPCSSTESKDERSIHKPAPITPHSSNANEKESIGKKFNSRKKPIIRKANGKAALPCTSTESRDEDPDVEMIVSNEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00979721;
90% Identity
-
80% Identity
-