Basic Information

Insect: Melieria crassipennis
Gene Symbol: -
Assembly: GCA_963668005.1
Location: OY764961.1:133816540-133818870[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 8.2e-06 0.00078 20.4 1.2 1 23 532 554 532 554 0.99

2 6 0.0059 0.56 11.4 2.0 1 23 564 586 564 586 0.98

3 6 1.6e-06 0.00015 22.6 1.4 1 23 592 614 592 614 0.99

4 6 6.7e-05 0.0063 17.5 8.2 1 23 620 643 620 643 0.97

5 6 1.5e-05 0.0014 19.6 2.9 1 23 652 674 652 674 0.97

6 6 5.6e-05 0.0053 17.8 1.4 1 23 679 702 679 702 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	8.2e-06	0.00078	20.4	1.2	1	23	532	554	532	554	0.99
2	6	0.0059	0.56	11.4	2.0	1	23	564	586	564	586	0.98
3	6	1.6e-06	0.00015	22.6	1.4	1	23	592	614	592	614	0.99
4	6	6.7e-05	0.0063	17.5	8.2	1	23	620	643	620	643	0.97
5	6	1.5e-05	0.0014	19.6	2.9	1	23	652	674	652	674	0.97
6	6	5.6e-05	0.0053	17.8	1.4	1	23	679	702	679	702	0.95

Sequence Information

Coding Sequence: ATGACAACGGAGGCTTATCCGGATTTGGAGAAGCTGTGTCGCTTGTGCCTACGCACCGCCGAGGAGGACAGTGCCTTGGTGCACATCTTTCCGTCGACTGCAAACGCTACTGCCAACGATGCTCCGCCGCTGTCCATACCAATGCGTATCATGGCTTGCGCTGCGCTGGAGGTGCAGCCCAACGACGGTCTTCCCAAATCCATATGCACCGAGTGTCGTTATCAGCTTGAGAAATCGTATTACTTCCGCAAGCGTAGTCAGCTGTCGGACAGCAAGCTGCGCAAGCACATTCGGCTGATAAGTTTGGGCAAGACGAGTCGCGTCTTCAGCAAGTTTTCGAACCAAGATGAATTAGAGGACGAAGACGAGCTGGAGTTTGAGGACTCGCTGCGTTTCATAGCCGAGCAGGAAGCTCTGTTGGAGGAACAAAAACGCCTCGCATGGCGGCAAGAGGTGGAAGAGGAAATGCATCGAAAGACTGCCGAGCACAAGGAGCAATGCGAGCTGGAGCTACGCGAGAAACTGCACGAAGAGCTACGCAACGAAGTGATAGAGGAGGTCAAGTGTGAGTTGCAAGCCGAGCAAGAGGCGAAAGAGTTGCAAATGCGTGCTGATTGCTTTGCAAATGCGCGCGTGTTAGTGCGTGCCGAAGTCACCGAAGATTGTCGTCAGGTGGAACGCGAAATGTTGTTGAATGAATTGGACAGCTTTCTGAAGGCAAAGCGCAGGAATACAAAGTCATTCAAATCAGTCGATGCGAGTTCAGCAGACGGGCAAGAGAAAACTGGGCGCTTGGTAACGCAGACGACGCGCAGAGCCATGAAGCGAAGTGCGGTGTCTCCACTGGGACGAGAAATACGTATTCTTAAAGTGCAAAGTGTCGAGAGTGACGCGCCGACCGCTGACAATAGTACCGTTAACAGCAGCATCGCAGCTGCAATGCCGTTCGAATCTGTTTCCTTGGCCAATGAGACTAGCAATGAAGTAGTAGAGACCGAAACTGAGACGGAGCAGAGTTATTACATTTACGAGTCGGTGGATGGCAATGAGAATGAGGACTTGGAAGGCAGTGTGCACGAACAGGAACAAGCAGAGAATACCGTCTACTTCGAGAAGAAACTGCAGGATGAAAATTTTCAGTTAACGGCCTCGGAAAGCGACGGCGGAGGGAGGGAAACGGCATCCTATCAGATTAAGGATACGGGCGAAATACAGTACTGCAAGAAGAGCAGCCAAACTAATGACGGTGACGGTGAGGATGACGAAGGCGATGCCGCTAACGAAGAGGTAGATGAcgttattgttttaaaatttgaagaTGATTTGGACGGTGATCACACGGATACAGTGGAATTGGATAGCTTGGacttgaacaaaaaaattattctgcTGAAGTCAATTGGTCAATCGAAGAGCAGTGAAGGTGACGACGATAATGATAACGAGGAGGAAGACAACGCGATGGTCAGCGATTCTCCGCCCTCGTTTACAAAACGTATTAATGGCAGTCACAGCAGTGCTATCACATCTGCTGCCAACAATTCGAAAAACGCTGAAGCGCCGATGCTGCGTGCCACGGACACAGCCAAAACCTTCAAATGCACCTCCTGCCCTATGGTGTACTCCACGGAGAAGTCGTTGAAACGCCACCTGCGCATACATAGCAAGATCGAGCAACATGGCCTCACCTACCAGTGCCCTGTGTGTCACATTTACCTGTCGTGCAAGAGCGCCCTGACGCGCCACATGGTCATCCATACGGGCGAACGGCCGTATGTCTGCGAGGAATGCGGCAAATCGTTCGTGCAGCGCGAAATACTCAAGCGCCACATGCATACGCACACCGGCGACCGGCCGCACAAGTGTCCGCATTGCTACCGTTCGTTCACGCAGAAGGTCACGTTGAGGCATCACATCAATCGGCAGCACAGCGTGGTGCCGGTGCTGCAGCAATTCAGCTGTCACTTGTGCCCGAAGCGCTTTAATCACGCGTCCGGGCTCAGCCGGCACCTGGCTTCGCACAGCGGCCTGAcattccagtgcaccaaatgcAAGCGGAAATTCGGCGATCGATCGTCAGTGAAGCGACACATTGCCAACGTACACGGCAAGGCGGGCAGCGACAAACAAAATCAACTGAACCCGGACGAGGAAGAAGCGCTGCAACGCAGCGACGACAACTCAGTAGAATTCAACGCGTAA
Protein Sequence: MTTEAYPDLEKLCRLCLRTAEEDSALVHIFPSTANATANDAPPLSIPMRIMACAALEVQPNDGLPKSICTECRYQLEKSYYFRKRSQLSDSKLRKHIRLISLGKTSRVFSKFSNQDELEDEDELEFEDSLRFIAEQEALLEEQKRLAWRQEVEEEMHRKTAEHKEQCELELREKLHEELRNEVIEEVKCELQAEQEAKELQMRADCFANARVLVRAEVTEDCRQVEREMLLNELDSFLKAKRRNTKSFKSVDASSADGQEKTGRLVTQTTRRAMKRSAVSPLGREIRILKVQSVESDAPTADNSTVNSSIAAAMPFESVSLANETSNEVVETETETEQSYYIYESVDGNENEDLEGSVHEQEQAENTVYFEKKLQDENFQLTASESDGGGRETASYQIKDTGEIQYCKKSSQTNDGDGEDDEGDAANEEVDDVIVLKFEDDLDGDHTDTVELDSLDLNKKIILLKSIGQSKSSEGDDDNDNEEEDNAMVSDSPPSFTKRINGSHSSAITSAANNSKNAEAPMLRATDTAKTFKCTSCPMVYSTEKSLKRHLRIHSKIEQHGLTYQCPVCHIYLSCKSALTRHMVIHTGERPYVCEECGKSFVQREILKRHMHTHTGDRPHKCPHCYRSFTQKVTLRHHINRQHSVVPVLQQFSCHLCPKRFNHASGLSRHLASHSGLTFQCTKCKRKFGDRSSVKRHIANVHGKAGSDKQNQLNPDEEEALQRSDDNSVEFNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -