Basic Information

Insect: Melieria crassipennis
Gene Symbol: -
Assembly: GCA_963668005.1
Location: OY764962.1:29018987-29022003[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.44 42 5.5 0.1 2 23 224 245 223 245 0.96

2 13 1.5 1.4e+02 3.8 5.5 1 23 251 274 251 274 0.94

3 13 0.13 12 7.2 0.1 2 22 288 308 288 310 0.87

4 13 0.017 1.6 10.0 0.6 2 23 365 386 364 386 0.97

5 13 0.00099 0.094 13.8 5.9 1 23 392 415 392 415 0.94

6 13 0.46 43 5.5 0.4 2 23 432 452 431 452 0.93

7 13 0.012 1.2 10.4 3.6 1 23 466 488 466 488 0.95

8 13 2.7e-05 0.0025 18.8 1.0 1 23 497 520 497 520 0.96

9 13 0.00015 0.014 16.5 0.4 3 23 527 547 526 547 0.97

10 13 2.3e-06 0.00022 22.1 0.4 2 23 553 574 552 574 0.97

11 13 0.0048 0.45 11.7 2.2 1 23 580 602 580 602 0.98

12 13 0.0009 0.085 14.0 3.0 1 23 607 629 607 629 0.95

13 13 0.0037 0.35 12.0 1.6 1 23 634 658 634 658 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.44	42	5.5	0.1	2	23	224	245	223	245	0.96
2	13	1.5	1.4e+02	3.8	5.5	1	23	251	274	251	274	0.94
3	13	0.13	12	7.2	0.1	2	22	288	308	288	310	0.87
4	13	0.017	1.6	10.0	0.6	2	23	365	386	364	386	0.97
5	13	0.00099	0.094	13.8	5.9	1	23	392	415	392	415	0.94
6	13	0.46	43	5.5	0.4	2	23	432	452	431	452	0.93
7	13	0.012	1.2	10.4	3.6	1	23	466	488	466	488	0.95
8	13	2.7e-05	0.0025	18.8	1.0	1	23	497	520	497	520	0.96
9	13	0.00015	0.014	16.5	0.4	3	23	527	547	526	547	0.97
10	13	2.3e-06	0.00022	22.1	0.4	2	23	553	574	552	574	0.97
11	13	0.0048	0.45	11.7	2.2	1	23	580	602	580	602	0.98
12	13	0.0009	0.085	14.0	3.0	1	23	607	629	607	629	0.95
13	13	0.0037	0.35	12.0	1.6	1	23	634	658	634	658	0.97

Sequence Information

Coding Sequence: ATGGCCATGCAGTGTCGCTGCTGTCTCAGCACCAAGGCCACTGAGTTCGTGGACATGGCTTCGTGCACTACGGACCAGCAGGACTTTTTTCACTGTTTCAACGTGTGCACACAACTGGAAGCGCGTGTGGACGATGTGTTGCCGGGCATGCTGTGCGGCAGTTGCTGCTACGATCTTCAGGTGGCCTATCATTTTGTGCAGGTGGCGCGGCAGGGCGATGCGGCACTGCGCGAATCCATGTTGCTGAAACAAAAACACTGGGAAGAGTCTCCGACAATGACAGAGATTGTTGAGGTCGAGACGGCTGAAGCGGAGGCGGAGATGGATCGTTTGGAGTATGTGAACGGCAGCGAGAATGAGGAGTGTGTTGTGGAGGAGCTACTGGAGGAGGATGAAGAAGGCCCACTAATGCAAGTGGAGCTGATGGAGGTGGAGGCTGTAGAGGAGGAGTCGCTTGATGAGGTCGGATACATGGATGTAAAGCCGTCGTTGGGCGATTTGGATGAAACGACACCAGCCCCTCAAAATGATGTTACCATCAAGCAAGAGCAGGTCGTCTGCTGCGCAGAAGATGAGGCAGACGATGAGTACTTGATTGAGTACAATGTCGAAGAGGCGACAGCAGTACGTGACGCAACGACAGTGGCGACGGCTAGCGGCGCCAAATGGAAATGCGTACAGTGCAAGCGCGTGCTGCGTGGTGATGTCTCCTACGAAGGGCACATGAATATGCATCGCGACATGCGGCCGTACTCCTGTTGGCAGTGCAGTTGTGCATTCCGCTGCAAGAATGCATTGACGCGACACACAGAGCAAAGGCACAACACGGAAGCGCTGCCACCGCAGCTTGGCTCGCAAAACCGTTGCGAGAAGTGCCCGAAAACATTAGAATCCGCTGTCGCGCTGGCAGAACACAATGAGCTGACGCACGGCACTAGCTCAATTGTGGAGTGCCGCTTCTGTCCGCAGATGACAACACTGCCGCGTGCCAAAATCGCCGAACACTATCGCAACGCACATCCTGCCGAGCATCGTCGGTACTTCCCCACCGCGGGTCGACCCGTTGTAGAGCCAGCGAAACCAACACCTTGGCAGTGTGACATCTGCAAGCGGTATATGCGTTCGGATTCGGCGCTGCGCGATCATCGCAACACGCACTTGAACGAGCGACCACATTCGTGTCAGTGCTGCAGCAAACGCTTTGCGACGAGCAACAATTTGCGTCAGCACATGCGCAGCGTGCACCCAGAGGAATACGAGAAGCTGATTAGCGAGGCGGGCGACATTGTGGTGCAGTGCGAAGTGTGCAAAAAGCAACTGCTGCGCCGTAATCTGGAGAAGCACGTGGCGCTGCATGAGAAGAAGAAGCGCGAAGCTAGCGAGACTCAAACAAAGTTCTTGTGTGCCTACTGTTCGCGCGAGTGCAAGAATCAGAAATCCCTCAGTCAGCACGAAAAAATGCACGAGAGCGAATCGCCTGATGTCACCTACATATGTGCCGACTGTGATCGCTCGTACGCCACACAGCATCTGCTACAGCAACACCGCAAGCAGGCCCACAAGGAGCGCGACAATTTCTGTCCCATTTGTGGTAATGCTTTCAAATTACGCAATCAGCTGCTGAATCACATGAAGCTGCACCTGGAGAAGAACATACAGTGCCCACAGTGCGACAAACGTTACGCGCGCAAGTTCGACCTGGATGTGCACATGCGCAGTCACACCGGCGAGATGCCCTATGCCTGCCATCTGTGCGAGAAGCGCTTCGCAATCAAGGTGCGGCTGACCTATCATCTGCAGAAACATTACGGCATAAAGCACCGCTGTAAGGAGTGCGGCGCCGAATTCAACTCGAAGCAAAAGCTGAAGGCGCACTCGTACAAACACACCGGCATGCCGTACCGCTGCGAGACATGCGACGGTCACGGATTCACCAATCGCGATGCCTTCAAGCGTCATCTGCTGCGTGTACATGGCGTTACCATGACCGAGGAAGCGCTGCTGGAGATGTTCCAGCAGAACACTGGCAAGTCGACACGCATACGACCCATCGATGAGCTGGAAAATGTAATGATACGCACCAGTCAAGTGGAAACTGCATCGACTACGGCGACCATAACTGAGGTGTTGATCAATGCCGAGGACATTGGAATAGCAACCGAAGTGGTGCACGCGTGA
Protein Sequence: MAMQCRCCLSTKATEFVDMASCTTDQQDFFHCFNVCTQLEARVDDVLPGMLCGSCCYDLQVAYHFVQVARQGDAALRESMLLKQKHWEESPTMTEIVEVETAEAEAEMDRLEYVNGSENEECVVEELLEEDEEGPLMQVELMEVEAVEEESLDEVGYMDVKPSLGDLDETTPAPQNDVTIKQEQVVCCAEDEADDEYLIEYNVEEATAVRDATTVATASGAKWKCVQCKRVLRGDVSYEGHMNMHRDMRPYSCWQCSCAFRCKNALTRHTEQRHNTEALPPQLGSQNRCEKCPKTLESAVALAEHNELTHGTSSIVECRFCPQMTTLPRAKIAEHYRNAHPAEHRRYFPTAGRPVVEPAKPTPWQCDICKRYMRSDSALRDHRNTHLNERPHSCQCCSKRFATSNNLRQHMRSVHPEEYEKLISEAGDIVVQCEVCKKQLLRRNLEKHVALHEKKKREASETQTKFLCAYCSRECKNQKSLSQHEKMHESESPDVTYICADCDRSYATQHLLQQHRKQAHKERDNFCPICGNAFKLRNQLLNHMKLHLEKNIQCPQCDKRYARKFDLDVHMRSHTGEMPYACHLCEKRFAIKVRLTYHLQKHYGIKHRCKECGAEFNSKQKLKAHSYKHTGMPYRCETCDGHGFTNRDAFKRHLLRVHGVTMTEEALLEMFQQNTGKSTRIRPIDELENVMIRTSQVETASTTATITEVLINAEDIGIATEVVHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -