Basic Information

Insect: Melieria crassipennis
Gene Symbol: zfh1
Assembly: GCA_963668005.1
Location: OY764962.1:15237488-15239282[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.014 1.4 10.2 6.5 1 23 285 307 285 307 0.98

2 9 2.2e-05 0.002 19.1 1.9 1 23 313 336 313 336 0.93

3 9 0.006 0.56 11.4 0.8 3 23 345 368 343 368 0.90

4 9 0.0011 0.1 13.7 3.0 1 23 380 402 380 402 0.95

5 9 2.9e-06 0.00028 21.8 1.5 1 23 410 432 410 432 0.99

6 9 0.0014 0.13 13.4 2.6 1 23 438 460 438 460 0.97

7 9 0.052 4.9 8.4 0.0 2 22 467 487 466 489 0.85

8 9 0.00051 0.048 14.7 3.3 1 23 495 517 495 517 0.97

9 9 1.1e-05 0.001 20.0 0.1 3 23 525 545 524 545 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.014	1.4	10.2	6.5	1	23	285	307	285	307	0.98
2	9	2.2e-05	0.002	19.1	1.9	1	23	313	336	313	336	0.93
3	9	0.006	0.56	11.4	0.8	3	23	345	368	343	368	0.90
4	9	0.0011	0.1	13.7	3.0	1	23	380	402	380	402	0.95
5	9	2.9e-06	0.00028	21.8	1.5	1	23	410	432	410	432	0.99
6	9	0.0014	0.13	13.4	2.6	1	23	438	460	438	460	0.97
7	9	0.052	4.9	8.4	0.0	2	22	467	487	466	489	0.85
8	9	0.00051	0.048	14.7	3.3	1	23	495	517	495	517	0.97
9	9	1.1e-05	0.001	20.0	0.1	3	23	525	545	524	545	0.99

Sequence Information

Coding Sequence: ATGTCGACCGTATCGTTGGAGAATCTGCAGTCCTTTTGTCGCATCTGTCTCGCATACCTGGATCACCAAACAGTGAAATATAACATTCACGAGGTGCGCAATCTGTCCAAGTGGATACTGTCCTGCACCACAATGATTGCGCTACCGCACGACAATTTGCCGCAGTTTGTTTGCCATCAGTGTTATGGCAAGTTGCGGCATTTTAACGAGTTCCGCAGCATGTCACTGCAGTCATTGCAGTTTCTGCATAACATACTCCGCCCAAATAGGCCAATAAGCAAATTGCCAACGAACACGGAGTACCAGCTAAAAAGCGGCGAGCAGGAACAAGTGCTCAGTCGCGTTTTCGGACACGGTGATTGGCAGGAGTTTCACTACGAGCTCGTAGATAAGCCCCAATTCAATGGGGAACCACTATTCAAGCAGATGGACGATGATATGGGGGAACAGGCATTTACGGATCCAATTGGACTGTCCACTGCTCAAGAGGGACAGCGGCATGAACACACGACCGAATCGGACGTCAAGCAACAATTGCCATCAAAAGTTGTGAAAAACATTGAGCAGAAAAGGGGAAGTAGTCCTTATCACAAAGTAGCCATCGAATCGGAGTTGACGGAGTTATCGACTGGCTCCGATCACGACAAAGATGGCGAAAGTTATGAGGCCGACAAAGACGGAAACGTGTCTGACAACTCCGCGGATTCTAAGGAAACCCGCGCCAGAAGAAGAAAACGGTCCAGAAGTAAATCTCAACGGATGATTTCAACGAACCCGAAATTAAAAGCGCTGGGCCTAACATCGTCTACATCGACATCCACTTCCACTTTAAAGAAAAAGTCCACCACGACGTTCCATTGCGACCGCTGTCCGCGACGCTGCTTCACCCAGGACACATTTGAAGCTCATAAGCGCACGCACGACGGCCTAAAGCCGTACGAGTGCGCCGAGTGCAAGCGTACCTTCAGCAATGCGCATCATTATCGTGTACATATGGTTGAGGCGCATCCGGCTGAAAAGCGAGAGATCATTTGCACATACGAGGGCTGCGGAAAGGTGTTCGAGCGCGAGACCACATACAAAGCACACTGCCGCGTAAAACACACAGACGCGAACCACATACGCGTGCCCAAAATCTACATATGCGATCAGTGCGGCTGCATGTTCCGCAACGCCACCAAGCTGAAGGAGCACAGTTACAAGCACGCACCACCCGAGGACTATCCCTACAAATGCGGAGAGTGTGACAAGCGCTTCGCGAAAAAGAGCAGTTACAATGAGCATCTGCTGCGGCACGCGGGCATCAAGAATTTCGAGTGCCCCTACTGCGATATGAAGAAGACGACCAACCACGAGCTGCGAACGCACATTAACTACCACACAAAGGAAAAGCAGTGGCCATGCCAACAGTGCTCGATGGTCTTTAACAGTGCAGCGAATTTGGGCATGCACGACCGCGTCGTTCATAAGGGCATCAAGCGCTACCAGTGTCGATATTGCGATCAGAGTTTCGGAAAATCAGATACGTGGAAGCATCATGAGATGAGGCACACTGGTGAAAAACCTCACGGTTGCGAAATATGTGGAAAACGCTTCATACAGGTAGTGGCACTGCGGGCACACTTGAAGACCCACAACAAGTTCGACAACAAGCCGGAACCGGAGCCGTCAAAATTGGCAAATGACTAA
Protein Sequence: MSTVSLENLQSFCRICLAYLDHQTVKYNIHEVRNLSKWILSCTTMIALPHDNLPQFVCHQCYGKLRHFNEFRSMSLQSLQFLHNILRPNRPISKLPTNTEYQLKSGEQEQVLSRVFGHGDWQEFHYELVDKPQFNGEPLFKQMDDDMGEQAFTDPIGLSTAQEGQRHEHTTESDVKQQLPSKVVKNIEQKRGSSPYHKVAIESELTELSTGSDHDKDGESYEADKDGNVSDNSADSKETRARRRKRSRSKSQRMISTNPKLKALGLTSSTSTSTSTLKKKSTTTFHCDRCPRRCFTQDTFEAHKRTHDGLKPYECAECKRTFSNAHHYRVHMVEAHPAEKREIICTYEGCGKVFERETTYKAHCRVKHTDANHIRVPKIYICDQCGCMFRNATKLKEHSYKHAPPEDYPYKCGECDKRFAKKSSYNEHLLRHAGIKNFECPYCDMKKTTNHELRTHINYHTKEKQWPCQQCSMVFNSAANLGMHDRVVHKGIKRYQCRYCDQSFGKSDTWKHHEMRHTGEKPHGCEICGKRFIQVVALRAHLKTHNKFDNKPEPEPSKLAND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -