Basic Information

Insect: Melieria crassipennis
Gene Symbol: -
Assembly: GCA_963668005.1
Location: OY764962.1:50737702-50739750[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.071 6.7 8.0 0.3 2 23 263 285 262 285 0.95

2 10 0.069 6.5 8.0 0.0 6 23 294 311 294 311 0.98

3 10 0.00064 0.061 14.4 1.3 1 23 317 340 317 340 0.91

4 10 0.025 2.4 9.4 2.7 3 23 352 372 352 372 0.98

5 10 3.3e-05 0.0031 18.5 0.3 1 23 378 401 378 401 0.96

6 10 4.5e-05 0.0043 18.0 2.0 1 23 407 429 407 429 0.96

7 10 0.14 14 7.0 0.3 2 23 438 459 438 459 0.97

8 10 0.0015 0.14 13.3 1.2 2 23 465 487 464 487 0.94

9 10 1.6e-05 0.0015 19.4 0.5 2 23 494 515 493 515 0.96

10 10 0.00029 0.027 15.5 5.7 1 23 521 544 521 544 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.071	6.7	8.0	0.3	2	23	263	285	262	285	0.95
2	10	0.069	6.5	8.0	0.0	6	23	294	311	294	311	0.98
3	10	0.00064	0.061	14.4	1.3	1	23	317	340	317	340	0.91
4	10	0.025	2.4	9.4	2.7	3	23	352	372	352	372	0.98
5	10	3.3e-05	0.0031	18.5	0.3	1	23	378	401	378	401	0.96
6	10	4.5e-05	0.0043	18.0	2.0	1	23	407	429	407	429	0.96
7	10	0.14	14	7.0	0.3	2	23	438	459	438	459	0.97
8	10	0.0015	0.14	13.3	1.2	2	23	465	487	464	487	0.94
9	10	1.6e-05	0.0015	19.4	0.5	2	23	494	515	493	515	0.96
10	10	0.00029	0.027	15.5	5.7	1	23	521	544	521	544	0.98

Sequence Information

Coding Sequence: ATGATTTGCCGTTTATGTTTGTGTAATCTGAGTGAGGACATCGCCATTCACTTGTACGGCGATCATACTGACACAAAGTTGGCCGTAATGATTACAAAGTACTTCGATTTGGAGATAGCCAAAGATGATCCCATTTCGACAGAGGTCTGTCAAGATTGTTGTGAACACATTGAGGACTTTCACAAGTTCTGGACGTACGTTGACGCCAAGCAGAGCACACTGCGCAATGAATTTCTGGAGATAAAGTGCGATGTCACACTATCGGCAGACGACACAAACAGCAGGGCTGCCGGTATTGGTGAGAGCCAGGAGGAGATGCTGCTAGACTTTAAGGATGTGCCAATGCTGTTGGACAACCACAACGATGCCACTGCCTTGGAGAATGTGGAGGAAGATGTAAAGGTGGATTTGGGTGATATTGACTTTAACGCATTGGATGATGAGGCCACTTCCAGTGACGACGATGTACCGTTGGAGCGCCTCAAAACTAAAGTGAAGAAAAAGCCTGCCaaagtgaaaaaattcaaaacaaaagccAGCAAAACAAAAGGCAGACGAAGTAAGTCCATCACATGTAAAAAGGAGCCAAAAGCAACCGATAGCAATGAAGCGTGCGATGTGGATGGCAGCAATCAAGGCGATAAAAGCAACAATGACAATGATGACGATAATGATCGTGTTAGCAGTGCCGATGCCAAATCGAAACGTCGCGATCCGGAAACGTTTTCGGAACATCACAAGAAAAAGCTGCGGCATGCGGAAATTATCAGCAAATCAATGACGCTGAGCTGTGATCTCTGCGACTATTTCGCGGAGAATTACCAGGACTTGCGTACACATTTTCAGACAGTGCACCAGCGTCTGGCGTATGTGAAGTGTTGCGGCGCCAAGTATACCAAACCGTCAATGTTGGCAGAGCACATACAGCTGCATCAGAATCCGGCGGCATTCCAGTGTGATATATGCGGCAAGAATCTGCGCAACTCCAAATGTCTGGCAGTGCACAAAGAGGGCAGGCACATGAAGGAACGTGAACCAAAGCCGACCATCGGCTGTCCCAAATGTCATCGGAAGTTTCAGAGCCAAGCGCGCTTGGACAATCACCTGGTCAAGCACGACAATGAACGCGATTATCCGtgcaaaatttgcaataaaCGATTTGCCACGCCGCAGCGCGTTCGCAAGCACATTGAGTCCATACACGACAACGTGTACCATCACGTTTGCGACGTGTGTGGCAAGAAGTTCAAATTCAAGCCCTCCTTCGAGAAGCACGTGCAAGAGCACAACGGCATCGTGGAGCCGACGGCACAGTGCGACATCTGCGGCGCCTGGCTGAAGAACCGGCAAGCGCTACGACTGCACCAGTTCAGGCATGACAAGAGCGACGTGAAGTGCAAGTTTTGTGGACGTGTTTGCGTGTCGCGCACCGCGCTACGCGGCCACATCAGCTACATGCACAAAAAGGCGTTCAACCTGCAGTGTAAATTCTGCGATAAAACCTTCAAAGAAATAAGGAATTTGGAGGAGCACATGGCCATACACACGGGTGTGCAGCTGTACTCGTGTCCGCACTGCTCCAAGGAGTGTCGATCCCGTTCAAACATGTACGTGCACATCAAGCGCTACCACGTGCAGGAGTGGATCAAGTCGAAGATTGCGCGCTCCAACGATCCGCACCTCAAACAGGAAGCTGTTCCGAATGAATCAGCGTAA
Protein Sequence: MICRLCLCNLSEDIAIHLYGDHTDTKLAVMITKYFDLEIAKDDPISTEVCQDCCEHIEDFHKFWTYVDAKQSTLRNEFLEIKCDVTLSADDTNSRAAGIGESQEEMLLDFKDVPMLLDNHNDATALENVEEDVKVDLGDIDFNALDDEATSSDDDVPLERLKTKVKKKPAKVKKFKTKASKTKGRRSKSITCKKEPKATDSNEACDVDGSNQGDKSNNDNDDDNDRVSSADAKSKRRDPETFSEHHKKKLRHAEIISKSMTLSCDLCDYFAENYQDLRTHFQTVHQRLAYVKCCGAKYTKPSMLAEHIQLHQNPAAFQCDICGKNLRNSKCLAVHKEGRHMKEREPKPTIGCPKCHRKFQSQARLDNHLVKHDNERDYPCKICNKRFATPQRVRKHIESIHDNVYHHVCDVCGKKFKFKPSFEKHVQEHNGIVEPTAQCDICGAWLKNRQALRLHQFRHDKSDVKCKFCGRVCVSRTALRGHISYMHKKAFNLQCKFCDKTFKEIRNLEEHMAIHTGVQLYSCPHCSKECRSRSNMYVHIKRYHVQEWIKSKIARSNDPHLKQEAVPNESA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -