Mcra017908.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melieria crassipennis
Gene Symbol
L
Assembly
GCA_963668005.1
Location
OY764963.1:16233584-16245767[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 6.4e-06 0.0006 20.7 1.7 1 23 175 197 175 197 0.98
2 19 0.53 50 5.2 5.8 1 23 203 225 203 225 0.98
3 19 2.8e-07 2.6e-05 25.0 3.1 1 23 231 253 231 253 0.99
4 19 1.3e-05 0.0012 19.8 0.3 1 23 259 281 259 281 0.98
5 19 3.7 3.5e+02 2.6 0.7 3 23 345 367 343 367 0.84
6 19 0.14 13 7.0 0.1 3 23 397 418 395 418 0.96
7 19 0.034 3.2 9.0 0.7 1 23 519 541 519 541 0.97
8 19 0.42 40 5.6 1.5 2 23 549 570 548 570 0.94
9 19 0.0057 0.54 11.4 0.2 1 23 578 603 578 603 0.90
10 19 6 5.7e+02 1.9 0.1 1 19 608 626 608 628 0.91
11 19 2 1.9e+02 3.4 0.1 2 23 639 661 638 661 0.94
12 19 0.0035 0.33 12.1 2.7 1 23 700 722 700 723 0.96
13 19 0.43 40 5.5 0.3 1 23 906 930 906 930 0.91
14 19 0.003 0.28 12.3 3.8 2 23 939 961 938 961 0.96
15 19 0.14 13 7.1 0.1 1 23 967 989 967 989 0.92
16 19 0.38 36 5.7 0.2 2 23 997 1018 996 1018 0.95
17 19 0.91 85 4.5 0.5 2 23 1114 1135 1114 1135 0.94
18 19 0.0065 0.61 11.3 0.0 1 23 1145 1167 1145 1167 0.97
19 19 0.012 1.2 10.4 1.2 1 23 1174 1196 1174 1196 0.93

Sequence Information

Coding Sequence
ATGTACTCGACGCACACTTCCTCCAGCTACTCGCCCTCCATATCGGACGGCACGCTCACGCCCAACTCGCTGCTGCAACATCCCCAACACTTGCCACATCACCTGCAACTGCAAAGCTTGCAACAGCTGCACGACGACGACAGCGCCGCGCAGACACAACGTCTGCGCCGTGCGCCGCACGCCACAAAAACCCCTAACGGCACTGAAGGTGTCCGCGATGGCGGCGCTGACGAGGACGACGACGCCAACGACGACGACAAGAAGGCGCACAAGAATGACAACGACTCGCGTCGCAACCCAAGAACGCAAGCCGAGTCGGTCGGTGCGGGCGATGGCGGCGGCGTTGCGGTGGAGCAGCTCAAGCGGCAACATGGGCGTCTGCATCGGCACCATCATCACCCGTCGCACGCGGAGCATCTGCACGGCATCAAAATTCCAACGAAACTGCGCAAAATCGATCGCGATGCGGCCAAATTTGATAAGTTGACAGGCGACGGCATTAAGAGCAGCGCCGACGGATCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGTCTTGGCTACTTAAAGAAACACGAGCAGAGCCACGCCGAGCATTTGCCCTTTAAATGTGACTACTGTGCCCGCCTTTTTAAACACAAACGCTCACGTGATCGTCACACTAAACTGCACACAGGCGATCGACGTTACCGTTGCCCGCACTGTGAGGCTGCGTTTTCACGAAGTGATCACCTGAAGATTCACATGAAAACGCACGACAATCAGAAGCCGTTTCAATGTACCATTTGCAATCGCGGCTACAACACCGCCGCCGCTCTCACCTCTCACATGCAGAATCACAAGAAGCAGGCCGCCATACTGGCCGCTGGTGGCAACCCGCAGGCGCTCAACTACAGTCCCCGCTCCACAGGCTCGGCATCGAGCAATGGCAGCCTGCACAAGCGGCGCTACGCCATGGCCATTGCCAATGCCGACAACAGTCCCAGTCGTCTCGAGTATTCCAAGCGACTGCGTGGCGCATTTTTGGCCTGCAACTTCTGCACCAAATCGGACTTTCACACGCTCGAGCAGCTGAACGCGCACATTCAGGCCATGCACGAAAAGGAGCTGCTGCCGCAGCGCGAGCAACCGCCAAATAACACAACGGTGGGTGCAATTGGCGATGTGAATTCCTTTCAGCTGGCCTGCGAGTACTGTACCATGAAGTTGCCCAACATTCCGGCCATGTTTCAGCACATGCGCACCACTCACATCGATCGCCTGACCAGCCCCAATTCCTACTTTGAGCACTTCAATCGGCTGGCGGCGACGGGCACTTTTAGTCCGCGCTTGATCAATGCCAAATCGCTGCCGCGCAGCAGTGTGGTCGAggaaaacggcaacaacaacaacaacatcaaagtGGAGCAACCATTGCACAGCAGCCCCAAGAGCGGCGAGGCGAAGCCAGAGGAGGAACCCACAGACTTGAGCCAGAACAAGCGCCGCTCGGTCACGCCCACGACGCCGCAGCAAAACTCACCGCAACTGCCACCGGAGAAGCCGGGCGTGTTCTTTTGCAATCAGTGCAACGCTGGCCTGCCCGATTTCGAGAGCTTTCGCAATCACCTGAAGACGCACATAGCGCAAGGACTGAACCTGATCTGTCACCACTGCGGCCTGGCGCTGCGCGAGCCGTCCGAGCACGAGCGGCACGTAATCTCGCACTTTCTCATCACCAATTCGGAGTATAACTGCGCAAGCGGCAACTGCAGCAAGTCGTACGCCAAGCCGGAGGAGCTGCAAAAGCATCTGCTCGACCAGCACGTGGTGCCGATGTTCAAGTGTTCGCTGTGTGCCGAGTTGTTCGAGTCGAAGGTGGCCATACAGGTGCACTTTGCGTGCACGCACTCTGCCGAATCGAAGCTGTTGCGCTGCTCCGCCTGCATGGAGGTGTTCCGCGCGGAGGCCGAATTCAATGTGCACGTGAAAACGCGCCACCAGGCGGTGAACGGCGCAGTGGGTGCTGCCAACTCGCTGCAGTGCATGTTCTGCCGCGCTGTGTGCGCCTCCGATCTGGAGATGCACTTCCACCTGGCTGCACACGCGCGTCAATTCCGCTGCCCCTCGTGTCCGGAAACCTTCCATGTGGAGTTTCTGCTGGATCGTCACATGCAGAGCCATCATGGCGGCAACGAACGTGCACCAATGCCGCCAAAGGAGACCTACGAGGATGCTACTGCGCCCGCGCCGCCTGTGCCCAACAATCCAATGAGTCCCATGAATTCGCTGTATGTGAATGCGCTGTTCGGCAAGGCGCAGCTCATGCCGCTGGCGCCgcagaataacaacaacagcatactCGACTACAATGTGGCATTTGCGGCGCACTTGAACAAGGGGCTGTTTCCGACAGCGGCGGCCGCAGCGGCGGGCGGCAAGTTCTACAGTCCGCTACAGGTCGACACCGGCGCCATGAAACACCCGGCGCACCTCATGTACGGTCTGAGTCAGCGTTACTTTGACACCGGCCGCACGCTGATGGACATGTACGCGCACcagcatcaacagcagcagcagcagcagcaacaggacaaggcagccgccgtggccaACTACTTCATTAGTCCCAAACACGCCGCAAGTAATGCGCAAGCGCCGCCAGAACCGCACAGCCGCATGTCGGCCGAAGCGGCAGGCGGCGCCGCTGGCGCTGGAACGGGCGCGGCCGGCTACAGCTGTGACATTTGCGAGCGCAACGACTTCCGCACCGAGTCCGAGGTGAATTCGCATCGCAAAATCGTGCACAACATGAAGACCGGCGTCAGCCTGCGCTGCGCCTACTGTGCGGGCAACTTCAAGTCGCGCAGCGAGCTGGAGCACCACATGAAGACGTGCCACAACTCGACGGGCAAGCACAAGTGCCTGATTTGCGACGAGATCTTCCCCTCGCCGGCCATCCTGGCCGAGCACAAGCTGCAGCACTCGAAGGTGGGCCAGTCGGGCAAGTGCTCACACTGCGCCAAGCCGCTGCCCGATGTGACGGCATTCAAGGCGCACCTGACGGAGCACAACAACGAGGCACAAATGCCGGTGCAGTGCATCTGCTGTCGGCAGTCGCTGCACTCGGACTTTGAAGTCAGTCTACATGCGCAATTCCACACCAAATCCTCCAGCACGCCGGAGAGCGTGTGTGCGCTTTGTTTGGCGCCCATGCCCAACGCCAGCGGCAGCGAGGCTAAAGTGTGCGAGAAGTGCTGCCGCAAGCATAATTTGAACGCCAAATACAAGCAGCCGCTGGTGGCGGAGAGCTACGAGCGACCCGCCGAATTGGCGCGCAACGTCTACGTGGAGAATCGCTGCAATCTGTGCAAGATGATACTGCCGCACGCGCAGAAACTGCAGGAGCATCTGGTCGAACACACATTTGCGGGCTGCGAGGAGCGCGGCTTCAATTGTTACATATGCTCGGCGGTGTTTACGGCGCCCGCGGGGCTGCTCAGCCACATGAACGAGCACGGGCCGCAGTCGCGTCCCTACGACTGCAATTTGTGCACGGAGAAATTCTACTTTCGCGCCGAGCTGGAACATCATCTGGTGGATCATGAGTTGCGCGGCATCAATGGGCGGCGCGAAGAGGTGACGCGTGCGCGCAAGGAGGACGAAACGGTGTCGGCGTCGTCGGAGCGCAAGACGAACACAAGTGGAACGCAGCTGACCTTGACCGAGGTGAAGCAGGAGATAATGGAGGCTGACAACAAGTCGCAAGCGGGCGACGACGACGAGTACATTGAGGTGGAAAAGGTGCCGGAACTGAATCAGCACAATCCTACGCAGCAGAGGGAGAGCTGCGGCGAAGCCAAACAGCAGGACGAGACGGAAAAGCAGCAGCGACAGGAGTCCAAGTCGGAGTCTTAG
Protein Sequence
MYSTHTSSSYSPSISDGTLTPNSLLQHPQHLPHHLQLQSLQQLHDDDSAAQTQRLRRAPHATKTPNGTEGVRDGGADEDDDANDDDKKAHKNDNDSRRNPRTQAESVGAGDGGGVAVEQLKRQHGRLHRHHHHPSHAEHLHGIKIPTKLRKIDRDAAKFDKLTGDGIKSSADGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILAAGGNPQALNYSPRSTGSASSNGSLHKRRYAMAIANADNSPSRLEYSKRLRGAFLACNFCTKSDFHTLEQLNAHIQAMHEKELLPQREQPPNNTTVGAIGDVNSFQLACEYCTMKLPNIPAMFQHMRTTHIDRLTSPNSYFEHFNRLAATGTFSPRLINAKSLPRSSVVEENGNNNNNIKVEQPLHSSPKSGEAKPEEEPTDLSQNKRRSVTPTTPQQNSPQLPPEKPGVFFCNQCNAGLPDFESFRNHLKTHIAQGLNLICHHCGLALREPSEHERHVISHFLITNSEYNCASGNCSKSYAKPEELQKHLLDQHVVPMFKCSLCAELFESKVAIQVHFACTHSAESKLLRCSACMEVFRAEAEFNVHVKTRHQAVNGAVGAANSLQCMFCRAVCASDLEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSHHGGNERAPMPPKETYEDATAPAPPVPNNPMSPMNSLYVNALFGKAQLMPLAPQNNNNSILDYNVAFAAHLNKGLFPTAAAAAAGGKFYSPLQVDTGAMKHPAHLMYGLSQRYFDTGRTLMDMYAHQHQQQQQQQQQDKAAAVANYFISPKHAASNAQAPPEPHSRMSAEAAGGAAGAGTGAAGYSCDICERNDFRTESEVNSHRKIVHNMKTGVSLRCAYCAGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCAKPLPDVTAFKAHLTEHNNEAQMPVQCICCRQSLHSDFEVSLHAQFHTKSSSTPESVCALCLAPMPNASGSEAKVCEKCCRKHNLNAKYKQPLVAESYERPAELARNVYVENRCNLCKMILPHAQKLQEHLVEHTFAGCEERGFNCYICSAVFTAPAGLLSHMNEHGPQSRPYDCNLCTEKFYFRAELEHHLVDHELRGINGRREEVTRARKEDETVSASSERKTNTSGTQLTLTEVKQEIMEADNKSQAGDDDEYIEVEKVPELNQHNPTQQRESCGEAKQQDETEKQQRQESKSES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-