Basic Information

Insect: Melieria crassipennis
Gene Symbol: RREB1
Assembly: GCA_963668005.1
Location: OY764962.1:17373007-17379325[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.06 5.7 8.2 2.0 1 21 284 304 284 306 0.95

2 15 0.0041 0.38 11.9 0.1 1 23 316 338 316 338 0.98

3 15 2.8e-05 0.0027 18.7 7.5 1 23 344 366 344 366 0.98

4 15 0.021 2 9.6 0.0 2 23 607 629 607 629 0.92

5 15 0.032 3 9.1 2.2 2 19 635 652 635 652 0.98

6 15 0.45 42 5.5 0.0 6 19 679 692 678 694 0.95

7 15 0.036 3.4 8.9 0.3 1 23 847 869 847 869 0.96

8 15 2.4e-05 0.0022 18.9 1.2 1 23 879 901 879 901 0.99

9 15 0.00075 0.071 14.2 2.2 1 23 907 930 907 930 0.97

10 15 0.0036 0.34 12.1 2.0 1 23 1275 1298 1275 1298 0.95

11 15 0.0001 0.0099 16.9 0.3 2 23 1657 1678 1656 1678 0.97

12 15 0.18 17 6.8 6.3 1 23 1684 1707 1684 1707 0.97

13 15 8.4 7.9e+02 1.5 8.7 1 23 1818 1841 1818 1841 0.95

14 15 0.1 9.7 7.5 1.1 3 23 1900 1920 1899 1920 0.91

15 15 0.0016 0.15 13.2 4.8 1 23 1926 1948 1926 1948 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.06	5.7	8.2	2.0	1	21	284	304	284	306	0.95
2	15	0.0041	0.38	11.9	0.1	1	23	316	338	316	338	0.98
3	15	2.8e-05	0.0027	18.7	7.5	1	23	344	366	344	366	0.98
4	15	0.021	2	9.6	0.0	2	23	607	629	607	629	0.92
5	15	0.032	3	9.1	2.2	2	19	635	652	635	652	0.98
6	15	0.45	42	5.5	0.0	6	19	679	692	678	694	0.95
7	15	0.036	3.4	8.9	0.3	1	23	847	869	847	869	0.96
8	15	2.4e-05	0.0022	18.9	1.2	1	23	879	901	879	901	0.99
9	15	0.00075	0.071	14.2	2.2	1	23	907	930	907	930	0.97
10	15	0.0036	0.34	12.1	2.0	1	23	1275	1298	1275	1298	0.95
11	15	0.0001	0.0099	16.9	0.3	2	23	1657	1678	1656	1678	0.97
12	15	0.18	17	6.8	6.3	1	23	1684	1707	1684	1707	0.97
13	15	8.4	7.9e+02	1.5	8.7	1	23	1818	1841	1818	1841	0.95
14	15	0.1	9.7	7.5	1.1	3	23	1900	1920	1899	1920	0.91
15	15	0.0016	0.15	13.2	4.8	1	23	1926	1948	1926	1948	0.99

Sequence Information

Coding Sequence: ATGCTCGCAGCACAGGCCAACGCAGCGAGCCAGTCGCTGGAGAGCAAAAGCGCCGCCACGCCCATTAAGCTGGAGCGCCGCGACTCGTCCACGTCGGAGTCGTCGCTGGAGCATTTGGATCTGGGGCGCACACCAAAGAAGCTCAACTCACACTCGTCGGCCACATCGACGCCACATGTTGTCGGTGgcacaaacaacagcaatagcaagCAGCTCAGCAGCGCTACCATCAACAACACCACCCCAGCTACAACCACCGAAATTTCCGCCAGCAGTGCCACGGACGAAGGTTTGGAGGCGCCGACGGTGCTACTGCGCGCCCAACAGCGGCTACACGACTCGGACGAGGCCAATGACTACGACGAGGACGAGTCGGCCGATGAGCAGACAAAGCAGAGCAACGCGGCACGCGCACAGCGCCACCACAAACGTCGCAGCACTTCAGGCCGGCTGGACAAACGCACCAGCGTTCATCTGGAGTACAATGCGGACAACCCCAACTCGCTGCGCAAGAAGTTTCGCTTCAATCGCAGCACCTCCGAACAGTCCACACAGCTCAACTCGCTGGCGAACAACGAGTCGGGCTTTGTCGACGCCAGCTGCAGCAGCCAATACCTGAACGCGTCCGCGACAATGGTAGCCGCGCAGCTGCACACCACGTCGCCGCGCAACTCCTCCTCGGCGTGCTCGGCCGCCTCGGCCTCGGCCACGGCGTCGCACAGCTCGTCCGCCTCGTCGTCGCCGCACGGCGCCGGCGGTACCTCGTCGTCACCGCACGGCGCTGGCGCCACCTCGTCCATATCCAGCCCCGAATCGGGTATTGGCGAGCGGGAGCGCGAGGACATGAAGTTCGTGTGCACCATCTGCGAGGTGGTGTCGGCGACGCGGCACGAGTTCACCAACCACATACGCTGCCACAATTACGCTTCGGGCGACACGGAGAACTTCACATGCGCCATTTGTTTGAAGATGCTCTCCTCCGCCTCGTCACTGGACCGACATGTGCTGGTGCACACGGGCGAGCGTCCCTTCAATTGCAAGTACTGCCACCTCACCTTCACCACCAACGGCAACATGCACCGCCACATGCGCACGCACAAGCAGCATCAGCACAATCACCATCATCGCCGCAACTCGAACGGAACCAAGAATAACGCCGGCAGAaacggcaacagcaaccacaacaatagcGCCAACAGCAACTGCCACAGCGCAGCGACACCTGCCGCCGCCGCAGCCAACAGCACTATCGGCACTTATACGCAGCTCAGCAACGGCGTCATCGGCGACGAGGGTGTCAAAGCGGCCTCAGCCGCGACGACAATGGCTGGCTTGTCGGCCATAGATGCTGCCATCGTGGCAgcggccgcagccgcagccgcttCAGAAGCAGCAGGTGTTAATGGTAAACGCTTAAACGGCAGCGGCGTAGAAAGTTACGAAAGTGATGGCGGTTGCTCAACGGATTCATCAAGTGCCATCAGCCACAGCTCAAATAatcacaaaaacaaccacaacaacaataataatgataatagcAATAATcatcataataacaacaacaacaacaacaacaacatgaaagcgaacaacaataacaacactagTGGCAATTGTAAGCGCAAAAACAGCGATCTTGTCGACGCCGACGACATAGCGTTGCTGAAGCGACGCATGAAGACTACaattaacaacaacataatCGGAGCTGACGACGTGACCGGCGCTGATGAGTCTGCGATGGCGGACGGTGTTGTCACAACGGATGTAAATGCCGCCGCCGATGCCACCACTCTTAGCGTAGAAGCGCACGCGCCCGTGTGCCCCGTCTGTAATGCCGAATTCGCAGACATGCGTGAACTGAGCGCGCACATGGACGGCGATCACGCAGATATTCCCGCCAAGTGTCGCCACTGTGACGTCGTGTTTCGCTCGCATCGCCAGCTGAATGCGCATCCATGCACGCAGCGCCCGTCGAAAGTAGTTGCCGAAAAGGATCTCCCGTTTGGTGGCATATTGAACTATGCGTGTGCTTGCGGTCGCACGTATACGAGCTACGACGAGCTGGAGGCGCACGCCCACGAATGTCTGGAATCGGATGCGGCCGATGACGCATTCTCGTCCCGCACTAAGCAGCGCAGTCTGAGCGAAAGCTCGCGCAGCGATCTCTTCCGCCTGTTGTACTTGAAGACAAAACCACTGCATGTGCAGAGCACGAATTCACTGCCATCTCCTCAATCGCCGCATTCCTCCCACTCACACCTCGACGAAGCGATGGAAGAAAGTGCCATCAAGCAGGAGGTTGACGTCGAGCGCATGTCGCAGCACTTTCTGTCGCAACAGTCGCACGACTCCAAGGACCTCGCCGACATACAGTCCATCCTCAATATGACATCGTCTTCGTCAACCTCGAACTTCCTGAAGAACTTCGAGCAATCGGTGAACACGCCTTCCAGCAACTACAGCCTGGACAAAGATGAGGAGGAGGCGCAGGACGTCTTCACCGCGGAGTTCCGCAAAATGAAATTGCGCGGCGAATTTCCCTGCAAGCTCTGCACTGCAGTATTTCCCAACTTGCGTGCACTCAAAGGTCACAATCGCTTTCACCTGAGCGCTGCCGGTCCGGCGGGTCCCTTCCGCTGCAACATGTGTCCCTACTCCATATGCGACAAGGCGGCACTCGTGCGCCACATGCGCACCCATAACGGCGACCGGCCGTACGAGTGCGCCGAGTGCAATTACGCGTTCACCACGAAAGCGAATTGCGAGCGCCACCTGCGCAACCGTCACGGCAAGACCACACGAGAGGAGGTTAAGCGCTCCATCATATATCACCCATCCGAAGACTCGTCCTGCGACGACCCAGCCAAAAAGCTGCACATGTTCTCATCACCTGATTTTGACGACGACATAGAGCTGCAATACCAGCAGCATCACCCGAAGGACCGCTCCACACCGGTATCACACTTGAAGGAAATGCTCACCGGCGAGAGCCCCACAACGAAACCCATCAAAATTCAGGTTAAAAGCCTAGAACAACTGCTGGACAAATCCGCGGGGTCGACGAACAGCTACAATGAAGCATTTGACGAGCGACATGCTCCTCCCGTCCGCTTGCCCGACACTGCTCCTATCGACCTGAGCATGGACGTTTTGGATCTAAGCAAGAAGCCTACTAGCCGCCCTGCTGAGCAGAACATCAACCCGACAGCACGAGCGCCAACGCCTCCAGCAGTGCCGCTGACGGTCGATACCGACAATCGGACGACCATAAACGCGCTGCCAGACCCCAGTAAATTCTATTTACCCACTACCGATAAAAACCCACAGCTATCCGCAGCCCATGAACTGCAGCTCGCAATGCCAAAATACTTCAAGGATCTGTACGAGAGTATGTTGTTTCCGACGCTCAAtccattttttcttcaaaacgCAATAATGCCCGACATGCACGCCAAGTTAAGCCGCATGTTCGCGGGTGCCGACACCACCCCGAATGCCGCCATGCCAACCATCAACGACGTCAACAAGGCGAATCTCAGCGCAGCGTCCAACGGCGTCCCTCCAATGTTGCCCCAGGTGAGCGCGTTTATGCCTGACAAACCCGGCGGCCATTCGCTCGGCTTTCCCTCGCCCGGCCAAATTATGTCAAAGTCACTGGCGTCGCCGGGCGGCCCGCCAAACAGCAATGCTACACTTGGCATGCCACGACACCCGCACATTCCACCCACCGTGCTGCCCGGTGGCCCTGTGAAAATGGTCATCAAGAACGGAGTGCTGATGCCGAAGCAGAAGCAGCGCCGCTATCGCACCGAACGGCCGTTTGCATGCGAACACTGTTCGGCGCGCTTCACACTTCGCTCAAACATGGAACGCCATGTCAAGCAACAACACCCGCAATATTACGCACAACGACAGCGCAGCGGGCACCACATCATGCGTGGCCGGGGGGCCAGCAGCGCCGCCGCCATGAACAACATCACGCATCTGCAGGCAGCCATTACGCaagcgcacaacaacagcaacaacagtgccAACCATAACGGCAACGGAGCCGGCTCGTCGCTCATATCGGAGCAGGTAAAGTACGCTATACTGGCACAGCATCTGAAGGCACGCAAGGACACCGATCTGCTGCAACAGGCGCTGGCTCACGGCTCCAGCAGCGTGACGTCGAACCAGCTGCTGCTGGGAGCTGCCGCTGCAGGCGCTGGATTGGCTCCAATGCCCCCCAACGGCCACCACTTCAACTTCAACCACCTGAACCAGCCAAATGCTAACGGCTCAGTGATGGAAGACGATGAGCCGAAGTTGATCATAGACGaagatgacgatgacgatgtgGAGGAAATTCCTGACGATGACAATGaggacgaggaggaggaggaggaacCTCAAGCTGACATGGATGACGAAGTCACTGAAAATGTGGCCGAAAATCAATTGCCCACGCCGGTGGAGGAGGTGAAGAGCAAACCGTCCAGCGAAACTAACGAAGTTGCTAAGAAGGTAGCCGAAACCATACTCGAGCAGGCAATTAAGGCGTCGGGTCCGAAAAACAGCACCACTGATTCTGCCAAAGCGCTGGCAAAGCCCGAAACGCCCGCACCTCCCGGTCCGGCTGCGCCCCCCAACCCAGCCGCACCTGCCAATACCATGAAATCGATGATCGCTCAAGCCGAGTCGGTAGGCAAATTTCTGAAGGAAGTCGCTAGCTCTCCGTTCAAGGACGAATCTCAAGACCTGGTGCCCGTGTCAAAGTTGGTGGATAACGCCACCAGCAATGCCGTTTCGTTCAACAACTACTTCCGTCGCAGCGACGTTGCCAATCACATGGAGCAGAGCGACGAGGAAGGGCTGGTGGCATCGGGCAGTGCAAGCGAGAGCAACAACTCCGGCACCGAGGATGTGGCTACCGCCGCCGAGCCAAAAAAGAAATCCGCCTACAGCCTGGCGCCGAATCGCGTCTCCTGCCCCTATTGCCAACGCATGTTCCCGTGGTCGAGCTCGTTGCGCCGCCACATACTGACCCACACGGGCCAAAAGCCATTCAAATGCTCGCACTGCCCGCTGCTCTTCACTACCAAGAGCAACTGCGACCGCCACCTGCTGCGCAAACACGGCAACGTTGAGTCCGCCGTGTCAGTGTACGTGCCAACGGAAGACGTCACCGAGCCCATACCAGTGCCCAAGTCCGTCGAGGAAAtcgagcagcagcaacggcagcgcgAGGAAGAGGAACGCAAGCGCAAGGCCGAGGAGGCGCAAGCGGAGCGCGAGCGTCGCGAAAAAGCGCAACAACGCTTGTTGCAACAGGagcaggagcagcagcagcagctgctttCACAGCTAGCCACTGTACAGCGGCTGCAACAAATAAATGCGGCCATTAGCGGCGCCAATGGCGCCAAATCCGCCGATCTAAATGCGATCTCATCGGCGGAGCTGCCCTACAAGTGCCACCTGTGCGAATGCTCTTTCTCCTATCGCTTTCTCTGCGTGGAGCACATCAAGCGAACTCACGCCCAGGAGTTCGAGCTGCTGCTGTCCAAAGGCGCACTCGACACGGACGCCGAATCCAATCAGGCATATCACATCGAGGAGGAGGAGCGCCGTGCTAGCGAGGAGAGCGGCTGCACCACGCGCAGCGGTGCGGGTGGCGGCAAATATCCCGACTACAGCAACCGCAAAGTCATCTGCGCCTTCTGTATGCGCCGCTTCTGGTCCACGGAAGACTTGCGACGCCACATGCGCACCCACTCCGGCGAGCGGCCGTTTCAGTGCGAGATTTGCCTGCGCAAATTCACGCTGAAGCACAGCATGCTGCGTCACATGAAGAAGCACAACGGCCGCCACCACAACGGCGGTACCGCCGACGACCTTTCGGCGGCCGGCAACAGCGGCTCCGACTTCTCGGACGACGAGCAAATGCCCACGCCCACAGCAACGCCGGCACCAGCTGCGGCCGGCACACCGCCAGTCAGCGCACTGCCCACGCCCAAAATACAGGAACTACTGAGCAAAGCCAACGAATGGCGCACCAGTCGCATGGGCGAGCAGAAGGAGAACATTGCCGACGAGCACAACAACCACCAGAGCGATCTGATCGGCAACTTGCTGGGCATAAGCGACCAGGGCATACTCAACAAGCTGCTCTCCTCCGCCGACGAGGCAGCCAAGCTGCTGGGCATCGACAAGTAA
Protein Sequence: MLAAQANAASQSLESKSAATPIKLERRDSSTSESSLEHLDLGRTPKKLNSHSSATSTPHVVGGTNNSNSKQLSSATINNTTPATTTEISASSATDEGLEAPTVLLRAQQRLHDSDEANDYDEDESADEQTKQSNAARAQRHHKRRSTSGRLDKRTSVHLEYNADNPNSLRKKFRFNRSTSEQSTQLNSLANNESGFVDASCSSQYLNASATMVAAQLHTTSPRNSSSACSAASASATASHSSSASSSPHGAGGTSSSPHGAGATSSISSPESGIGEREREDMKFVCTICEVVSATRHEFTNHIRCHNYASGDTENFTCAICLKMLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHNHHHRRNSNGTKNNAGRNGNSNHNNSANSNCHSAATPAAAAANSTIGTYTQLSNGVIGDEGVKAASAATTMAGLSAIDAAIVAAAAAAAASEAAGVNGKRLNGSGVESYESDGGCSTDSSSAISHSSNNHKNNHNNNNNDNSNNHHNNNNNNNNNMKANNNNNTSGNCKRKNSDLVDADDIALLKRRMKTTINNNIIGADDVTGADESAMADGVVTTDVNAAADATTLSVEAHAPVCPVCNAEFADMRELSAHMDGDHADIPAKCRHCDVVFRSHRQLNAHPCTQRPSKVVAEKDLPFGGILNYACACGRTYTSYDELEAHAHECLESDAADDAFSSRTKQRSLSESSRSDLFRLLYLKTKPLHVQSTNSLPSPQSPHSSHSHLDEAMEESAIKQEVDVERMSQHFLSQQSHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSLDKDEEEAQDVFTAEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRFHLSAAGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAECNYAFTTKANCERHLRNRHGKTTREEVKRSIIYHPSEDSSCDDPAKKLHMFSSPDFDDDIELQYQQHHPKDRSTPVSHLKEMLTGESPTTKPIKIQVKSLEQLLDKSAGSTNSYNEAFDERHAPPVRLPDTAPIDLSMDVLDLSKKPTSRPAEQNINPTARAPTPPAVPLTVDTDNRTTINALPDPSKFYLPTTDKNPQLSAAHELQLAMPKYFKDLYESMLFPTLNPFFLQNAIMPDMHAKLSRMFAGADTTPNAAMPTINDVNKANLSAASNGVPPMLPQVSAFMPDKPGGHSLGFPSPGQIMSKSLASPGGPPNSNATLGMPRHPHIPPTVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRQRSGHHIMRGRGASSAAAMNNITHLQAAITQAHNNSNNSANHNGNGAGSSLISEQVKYAILAQHLKARKDTDLLQQALAHGSSSVTSNQLLLGAAAAGAGLAPMPPNGHHFNFNHLNQPNANGSVMEDDEPKLIIDEDDDDDVEEIPDDDNEDEEEEEEPQADMDDEVTENVAENQLPTPVEEVKSKPSSETNEVAKKVAETILEQAIKASGPKNSTTDSAKALAKPETPAPPGPAAPPNPAAPANTMKSMIAQAESVGKFLKEVASSPFKDESQDLVPVSKLVDNATSNAVSFNNYFRRSDVANHMEQSDEEGLVASGSASESNNSGTEDVATAAEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSVYVPTEDVTEPIPVPKSVEEIEQQQRQREEEERKRKAEEAQAERERREKAQQRLLQQEQEQQQQLLSQLATVQRLQQINAAISGANGAKSADLNAISSAELPYKCHLCECSFSYRFLCVEHIKRTHAQEFELLLSKGALDTDAESNQAYHIEEEERRASEESGCTTRSGAGGGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHNGRHHNGGTADDLSAAGNSGSDFSDDEQMPTPTATPAPAAAGTPPVSALPTPKIQELLSKANEWRTSRMGEQKENIADEHNNHQSDLIGNLLGISDQGILNKLLSSADEAAKLLGIDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -