Basic Information

Insect: Melieria crassipennis
Gene Symbol: -
Assembly: GCA_963668005.1
Location: OY764961.1:62171619-62178229[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0093 0.88 10.8 0.6 2 23 48 69 47 69 0.96

2 16 0.0071 0.67 11.1 1.9 1 23 75 98 75 98 0.91

3 16 0.11 11 7.4 0.1 3 23 103 125 101 125 0.90

4 16 0.013 1.2 10.3 0.3 1 21 133 153 133 154 0.94

5 16 4.3e-05 0.0041 18.1 2.3 1 23 162 184 162 184 0.97

6 16 0.0078 0.73 11.0 2.6 1 23 190 212 190 212 0.97

7 16 0.00045 0.042 14.9 2.6 1 23 218 240 218 240 0.95

8 16 3.2 3e+02 2.8 2.1 2 23 697 719 696 719 0.94

9 16 0.15 14 7.0 1.6 1 23 743 765 743 765 0.82

10 16 0.14 13 7.1 3.2 1 23 773 797 773 797 0.94

11 16 0.1 9.5 7.5 4.7 3 23 803 823 801 824 0.94

12 16 0.00033 0.031 15.4 0.1 2 21 839 858 838 859 0.94

13 16 0.0018 0.17 13.0 0.4 1 23 867 889 867 889 0.97

14 16 9.2e-07 8.7e-05 23.4 2.3 1 23 895 918 895 918 0.98

15 16 2.8e-05 0.0027 18.7 0.9 1 23 924 946 924 946 0.98

16 16 0.00024 0.023 15.8 2.2 1 23 952 974 952 974 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0093	0.88	10.8	0.6	2	23	48	69	47	69	0.96
2	16	0.0071	0.67	11.1	1.9	1	23	75	98	75	98	0.91
3	16	0.11	11	7.4	0.1	3	23	103	125	101	125	0.90
4	16	0.013	1.2	10.3	0.3	1	21	133	153	133	154	0.94
5	16	4.3e-05	0.0041	18.1	2.3	1	23	162	184	162	184	0.97
6	16	0.0078	0.73	11.0	2.6	1	23	190	212	190	212	0.97
7	16	0.00045	0.042	14.9	2.6	1	23	218	240	218	240	0.95
8	16	3.2	3e+02	2.8	2.1	2	23	697	719	696	719	0.94
9	16	0.15	14	7.0	1.6	1	23	743	765	743	765	0.82
10	16	0.14	13	7.1	3.2	1	23	773	797	773	797	0.94
11	16	0.1	9.5	7.5	4.7	3	23	803	823	801	824	0.94
12	16	0.00033	0.031	15.4	0.1	2	21	839	858	838	859	0.94
13	16	0.0018	0.17	13.0	0.4	1	23	867	889	867	889	0.97
14	16	9.2e-07	8.7e-05	23.4	2.3	1	23	895	918	895	918	0.98
15	16	2.8e-05	0.0027	18.7	0.9	1	23	924	946	924	946	0.98
16	16	0.00024	0.023	15.8	2.2	1	23	952	974	952	974	0.95

Sequence Information

Coding Sequence: ATGGCGTGCTTAACGCAAATACTCAAAGATGCCAAGCCGTCGAGCTCCGACACCACGCCAGCCACTGACGACGTCACCACTGCTCAGTCTGCCGTGCAGGCCATGCTGGTCCAACTCACCACAGACGGTGTGCCCAAGCTGCACTGTCCGGTGTGCAACAAGGCACTCGTCTCGCTCAACGGCTACGTGAAGCACCTAAAGAAGCACGAACCGCCCGGCGGTTTCTTTTGTCGCTACTGCGACGCGCGCTACTGCTCCGAGGAGGAGCTAAAGCGGCATCGCGACGCCGTGCACACCACCATCGCCTGTCGCATCTGCAAGGATGTCACTTTCACCAGTGAGGACGACTATCGCGCCCACATACGCGACGTGCACAACGGCATCGACCGCGTTATGTTCAAGTGCGACAAATGCGATGCCGAGTATAAGACCATCGATCCGTTCAAGCGGCACCTGGAGACGCAGTGCGGCACAGTAAAGCCGCACAAATGCGATCAGTGTCCCATGGCATTCGTGACCAAGTACAATCTGAAGCAGCACAAGGAGTCACACTCGGGTGAGCGCAAGTACTGTTGCAGCTACTGTGGCAAGAATTTTCTGCAAAAGGGGCGACTGGTAGAGCACGAGCGCTCGCACACAGGCGAAAAGCCTTACAAGTGCGATGTGTGCGGCAAGTGCTTTGCACATCGCGAGAGCATCGTTACACATTCCTCCATACACACCGGCATACGGCTGGTAGAGTGCAAGTGCTGTCTGTCGCGTTTTTCCTGCTACTCGAATTTGATCAAACATCGACGCACACGCATGGAGACTTGCGGCCTGCCGCAGTATGATCCGCCCAAGAATCGCATACGCACACATCGCTCAAGAATTCCACCCACTCTAAATCCAACATCGGAAATTAAGGTGAGCAATCTGAATAAAATTATAAAGCCCGACGACAAGGAGCACatcaaaaaaccaattaaaaagGAGAGCAGCGATTCAAAAGTGGCCAAAGTTAACAGCGGCAAGCGGCCCGGACGCCCGCCTGGGCGTAAACCCGGTCCGAAGTCCAAAAGTAAGCAGCACGCCGAAGAGAAAGAACTGTCCGAGTCCAGCGACAGTGATGCACATGGCACCCACAATGTAATAATTCCCAAACGTAAGACACGAAGCAATGCAGCGGCGCGAAACGGACTCTCATCCGCAACGGCAGCAACATCGGAAGCCGTCAGCAATACCAGTGTGCAGCAAAAGACACACTGGAGCGACAGCGACACAGAGGACGACTATCCCGACTTTGATCCGCCGGATAGCGAAAGTGACGGGGACCGCAAGCAGGAATTCCGTTTGCCTACACCCAAGCTGTCCATCAAGCAGGAGAAGCCGGATGGAGTAGGCGAGCAAGAGTCGAACTCGGAAGCGATGGATGTTTTTGAGTATTCTAACACGGCTGAATTTATCAGCGTAAAGTCTGAAGATGATGGCAATATTTTCAATGAAAAGGACAAACTGCTCGACTGCTTGCTAAATGACGATGTGGACACTGTGGACAACGAAACTGTAGAGCGACTGTCGTTTGGCAGCAGCAAATCAACGCAAATATCAGCTAAGGATAGCGTTAAAACAGAGGAGAGCATACTAGAAGAAACGGAGGTTATTATGATTAAGAACGAAGATATTGTGGACTTTGTGGAGGAGGACATACTCGATGTAAAAAATCTGACTGATTCCGATGTGGCTAAATGCAAGAATATGTTGGAAGATGTTAGTAGGCATCGTTATCCAGAACTGGAAGAGGAGACAACTGTGAAAGTAGCGCGCAACGCTGCCGCCGTCCCCAAGCGCAAGTCGAAACGAAAAAGTCAACAAAAGCAAGTCAAGCCGGAAGTGGAGCATGACGACGAAGTGAACGACGACGATGGTGACGGTGACGACTGTGGCAGTGGCGGCGGTGAACCAGAGAAACGCAAACGGGGGCCTTATCGCAAGCGTCGTGAATCCAATGAAGGCGAGCCGGAGGGGCCGGCACGTCGCTTATCCAAACTTTCGCATCAGGAGCTGAAATCCCGCCTCAAAATGCTGAAGAAGGAGGGCAAGTCCTGGACCTGTCCGCATTGCATAAAAATCTATCACATGCGTAAGCCTTTCGTTAGGCATTTGCGCGAGGATCATTCGCTGCCCGTCGAGGAAATACACAAGCTATGTCAGCCGGAAGATGTGGGCGTGGTGAACGAAGATATTTTCAAGTGCAAATATTGCGGCAAGATTTATCTGATGTATAAGCGGTTGATATCGCATGAAAAGCTGCACGGTCCCAGTGGCGATCTTTTATTCAAGTGTCCTTGCCACTGCAACGTTTACTTTGCCACCAAAGACGCTGCCACGGCGCATGCACAGCACGAACACCGCAAGCTGCTCTTTTGTGAGCTTTGCCAAAAGTTCATGACCGGCCACGATTCGCTGAAGAACCACATGCGCAACCACCATCATCAGGGCAAGACTGAATCGCGCAGCTCGAAGCGAAATCTGGTGTGTGACAAGTGCGGCAAAAAGTTCGCCGGACGCACTTCACTCACCGATCACGTACGATCGGACTGCGGACGCAAACCGCTGTACGCGTGCAATGTATGCGGAAAGCATCTGACCACAGCCGGCATACTCAAGACGCACATGCTGCAACATAAGGACGAGACGCCCTACCAGTGCGATCAGTGCGGTAAAACTTTCAAGGTGAAGGCGCAGTACAAGACGCATATCAAGACGCGCCACTCCAACCTGAAGCCGTATCAGTGTCATCTCTGTCCGAAGGCATACCCGTACCGTGAAAGTCTGCTCACGCACATGACAGTGCACACAGGCATCAAGCGCTTCTTATGCAACGGCTGTGGCAAGCGTTTCACATGCATTTCCAACCTGCAGGCACACCGCAAGGTACACGCCGAAACGTGCGGCCAGCTGCCACTCAACGCCAAGGCCACACAGTACATGGGTGTGCAGAAGGGCAACCTGCTGCTGGGCGCCAAGCCGGAGGCGGGCGTAGACTATGCCGAAACGAACACGCTGATCGCCAAGAACGTACTCGACCGGGATCTGCCCATGGCACAAGAGTTGAACTACCCCTCCGAGCCGTCAGCGCCGCTGGCTACAGTACCGCTGAATTACACACAAACGCCGGCGCCACAAATGCTGCTGCCACCCATGGTGATGCCGCAGTACAGCGCCGACGATTCACACGCGTCGTCGTACAATTAG
Protein Sequence: MACLTQILKDAKPSSSDTTPATDDVTTAQSAVQAMLVQLTTDGVPKLHCPVCNKALVSLNGYVKHLKKHEPPGGFFCRYCDARYCSEEELKRHRDAVHTTIACRICKDVTFTSEDDYRAHIRDVHNGIDRVMFKCDKCDAEYKTIDPFKRHLETQCGTVKPHKCDQCPMAFVTKYNLKQHKESHSGERKYCCSYCGKNFLQKGRLVEHERSHTGEKPYKCDVCGKCFAHRESIVTHSSIHTGIRLVECKCCLSRFSCYSNLIKHRRTRMETCGLPQYDPPKNRIRTHRSRIPPTLNPTSEIKVSNLNKIIKPDDKEHIKKPIKKESSDSKVAKVNSGKRPGRPPGRKPGPKSKSKQHAEEKELSESSDSDAHGTHNVIIPKRKTRSNAAARNGLSSATAATSEAVSNTSVQQKTHWSDSDTEDDYPDFDPPDSESDGDRKQEFRLPTPKLSIKQEKPDGVGEQESNSEAMDVFEYSNTAEFISVKSEDDGNIFNEKDKLLDCLLNDDVDTVDNETVERLSFGSSKSTQISAKDSVKTEESILEETEVIMIKNEDIVDFVEEDILDVKNLTDSDVAKCKNMLEDVSRHRYPELEEETTVKVARNAAAVPKRKSKRKSQQKQVKPEVEHDDEVNDDDGDGDDCGSGGGEPEKRKRGPYRKRRESNEGEPEGPARRLSKLSHQELKSRLKMLKKEGKSWTCPHCIKIYHMRKPFVRHLREDHSLPVEEIHKLCQPEDVGVVNEDIFKCKYCGKIYLMYKRLISHEKLHGPSGDLLFKCPCHCNVYFATKDAATAHAQHEHRKLLFCELCQKFMTGHDSLKNHMRNHHHQGKTESRSSKRNLVCDKCGKKFAGRTSLTDHVRSDCGRKPLYACNVCGKHLTTAGILKTHMLQHKDETPYQCDQCGKTFKVKAQYKTHIKTRHSNLKPYQCHLCPKAYPYRESLLTHMTVHTGIKRFLCNGCGKRFTCISNLQAHRKVHAETCGQLPLNAKATQYMGVQKGNLLLGAKPEAGVDYAETNTLIAKNVLDRDLPMAQELNYPSEPSAPLATVPLNYTQTPAPQMLLPPMVMPQYSADDSHASSYN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -