Basic Information

Insect: Melieria crassipennis
Gene Symbol: -
Assembly: GCA_963668005.1
Location: OY764962.1:53401029-53407830[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.9e-07 1.8e-05 25.5 1.6 2 23 167 188 167 188 0.97

2 9 2.3e-07 2.1e-05 25.3 1.5 1 23 194 216 194 216 0.98

3 9 2.4e-07 2.2e-05 25.2 0.7 1 23 222 244 222 244 0.98

4 9 6.7e-06 0.00063 20.7 0.5 4 23 255 274 250 275 0.92

5 9 6.8e-05 0.0064 17.5 2.9 1 23 280 302 280 302 0.97

6 9 3.4e-05 0.0032 18.5 3.7 1 23 308 331 308 331 0.98

7 9 0.00046 0.043 14.9 1.9 1 23 337 359 337 359 0.99

8 9 5e-06 0.00047 21.1 0.8 1 23 364 386 364 386 0.98

9 9 0.00075 0.071 14.2 0.3 2 23 393 417 392 417 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.9e-07	1.8e-05	25.5	1.6	2	23	167	188	167	188	0.97
2	9	2.3e-07	2.1e-05	25.3	1.5	1	23	194	216	194	216	0.98
3	9	2.4e-07	2.2e-05	25.2	0.7	1	23	222	244	222	244	0.98
4	9	6.7e-06	0.00063	20.7	0.5	4	23	255	274	250	275	0.92
5	9	6.8e-05	0.0064	17.5	2.9	1	23	280	302	280	302	0.97
6	9	3.4e-05	0.0032	18.5	3.7	1	23	308	331	308	331	0.98
7	9	0.00046	0.043	14.9	1.9	1	23	337	359	337	359	0.99
8	9	5e-06	0.00047	21.1	0.8	1	23	364	386	364	386	0.98
9	9	0.00075	0.071	14.2	0.3	2	23	393	417	392	417	0.95

Sequence Information

Coding Sequence: ATGGAAAGCATCTGTAGACTCTGCTTTCAGCCAGCAGCGTTATTTCAAGTACCCGGCTACAATATTCCCACCTGTGTTAAGTGTTCCGAGCACCTGACCGCCAACGGTTTCTATCAATCGGTGCGCGCAGACGGCCAAACACTAGCGACCACATCTGCCAGCGCTGCGGCAGCGCAATTgggcagcaataacaataataacaacagcagcaacaacaacagcaacagtaacaacagcaatagcaacaatttaatgcaacaattgcaacagcaacaacaacagcagcagcaacaacaacagcaattgcaATCGAACAGCTCTTCCGAGAATCTGCATTCGCAGGACGATTCCGAAGAACATACCCGGCCTAACCGACGTCAAGTTGGgttacaaaatcaacaaaatcgtGCGAAATTAAAAGCGGTCACAATGTCCTCCTTTGAATTGGAGAAGACCATACAACACTTAGACGTGGATTTGATATTCAACGAGGAGGGCTCCTGCCCGCTCTGCAATAAGACCTTCTCGCGCAAGTCCTCGCTACTCACACACATACGAAATCATGCCGCCGAGCGGAAATATGTTTGCACTTATTGCCACAAAGGCTTCACACAAGCTGCCAACTTGAGAAATCACGAACGCATACATACCAACGATCGTCCGTATGTATGTGTCGACTGTGGCAAAACATTTACGCAGATAACAAACTTGAATAATCATCGACGTTTGCACACTGGCGAGCGACCTTTTGTTTGCATTGAACCGGAATGTGGTCGCTCGTTTGCGCAGGTTACAAACCTCAATAACCATATGAAGACGCACCACAAGGTGCAGCAATACTGCTGCAATCAGTGCCCCAAGAAGTTCACACAAGTCACCTCGCTCAATCAGCATTTGCAGGCGCACGCCGGCATCACCGGCTACTACTGTCCGCGCTGCCCGGATAAGACCTTCAAGCAACAATCGCAACTGCACACCCATATGAAATCGCACGGAATGGCCTTCCCCTACGAGTGCAGCAAATGCGACGAGAAATTCCTACAGCAGGCACATCTCGATCAGCACCTAAAGATGCACGACGAATTCAGGTTCAAATGCGACATTTGTCCCAGCTCGTTCAATCAGGAGTCGCTGCTCAAGAAGCACGTGCAACGTCATGTGGAGGGCAGATACTTGACCTGTCCGGTAGCCAATTGCAATGAAGCGTTTGCGGTGCGTCAACATCTGTCGAAGCATTTGCTGACCAGTCATTCGCACAATGAATTGCCGCCGCCAAAGCGCTCGAAGAAGTCCATAACGCTGCAATCGCCGCAGCAGCCGGTGACCATGATCGGGCAGCCGCTATCCATTCAGCATACAACTGGACAACGTGGCCGCCCGCCAAAGAATAAAAAAGCGCAACAGGCCGCCATCAAAATCGAGATCAACGAACCGTTGCACAATCAGCACGTGATCAGCAATGCTAGCGGCCTCTCGATACAGCAGCAAATCAACCAGcacatgcagcagcagcaacagcaacagctgcacCAGCAACAGCATCAACAGCACCAAATGCTGGCCAATCAAGTGAAAGCGCGTTTCATACAGACAAAGTAG
Protein Sequence: MESICRLCFQPAALFQVPGYNIPTCVKCSEHLTANGFYQSVRADGQTLATTSASAAAAQLGSNNNNNNSSNNNSNSNNSNSNNLMQQLQQQQQQQQQQQQQLQSNSSSENLHSQDDSEEHTRPNRRQVGLQNQQNRAKLKAVTMSSFELEKTIQHLDVDLIFNEEGSCPLCNKTFSRKSSLLTHIRNHAAERKYVCTYCHKGFTQAANLRNHERIHTNDRPYVCVDCGKTFTQITNLNNHRRLHTGERPFVCIEPECGRSFAQVTNLNNHMKTHHKVQQYCCNQCPKKFTQVTSLNQHLQAHAGITGYYCPRCPDKTFKQQSQLHTHMKSHGMAFPYECSKCDEKFLQQAHLDQHLKMHDEFRFKCDICPSSFNQESLLKKHVQRHVEGRYLTCPVANCNEAFAVRQHLSKHLLTSHSHNELPPPKRSKKSITLQSPQQPVTMIGQPLSIQHTTGQRGRPPKNKKAQQAAIKIEINEPLHNQHVISNASGLSIQQQINQHMQQQQQQQLHQQQHQQHQMLANQVKARFIQTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00191514;
90% Identity: -
80% Identity: -