Mcra004563.1
Basic Information
- Insect
- Melieria crassipennis
- Gene Symbol
- Zfy1
- Assembly
- GCA_963668005.1
- Location
- OY764961.1:74941814-74944397[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 6.2e-05 0.0058 17.6 0.8 2 23 361 383 360 383 0.96 2 11 0.46 43 5.4 0.2 1 21 449 469 449 470 0.93 3 11 9.8e-05 0.0092 17.0 0.1 1 23 478 500 478 500 0.98 4 11 2e-05 0.0019 19.1 0.1 2 23 505 527 505 527 0.96 5 11 1.7e-05 0.0016 19.4 2.0 2 23 534 555 533 555 0.98 6 11 2.3e-07 2.2e-05 25.3 0.2 1 23 561 583 561 583 0.96 7 11 0.00018 0.017 16.2 0.9 1 23 589 611 589 611 0.99 8 11 8.6e-07 8.1e-05 23.5 2.8 1 23 617 639 617 639 0.99 9 11 0.0005 0.047 14.8 0.3 1 23 645 667 645 667 0.98 10 11 0.00031 0.029 15.4 4.8 1 23 673 695 673 695 0.99 11 11 0.011 1 10.6 0.8 5 23 703 721 702 721 0.97
Sequence Information
- Coding Sequence
- ATGGACGTTGAGAAGATCTGCCGCACGTGCCTGGGACTCAACGGTCCGCTATTATCCATCTACGATGGCACGGGTGGTGGAGGAGGAGGCTGCATTGCTGATATGCTTCGGGATTTCACAAAAACTAAGCCACAACCGGCGGACAGTCTGCCACAAAAGGTATGCCTGTCTTGTATCAGCGAGATAAATCGCTGCTACTCATTCAAAATGAAGTGCGAGAACTCGAACAGAACGCTGCGACAGCTGCTGCCAGATGCGCTGCCCGAGGAGCCGGACAAAAGCTGCAAGCCACCGATTGTGCAAGCGGACAAATATGTGCAAACAAGCGGGCCAGAAAGCAAAGCCATGCAAACACAGACGCAGGTGCATGATGTGACACAAACTGTACAGACGATCAATGCAGACAAAACAGCTGCACCTGTGACACTTGGGCGCGACAGCAAGTTGTGCACCACGCGCAAAAAAGCCATTATGGAAAAGGAAACAGCATCGTCGTCGCCGGCACAGTTCGTGGAATACGGAGCGCGTCGTAGTCGGCGGACCGTAGGCGCCGTTAAACGTAAGCGCTCCGAGAGCCCGGACGTGACGGATCTGCCGAATGGTAGTGAAATCATTATGGAAGTGCAAGCCGATGAAATGGACACAGAGGCGTGCGTTGATGTGCCGGACGGGGACACGGGCACGACGGTATACGCTGCACTGCGTGCGGAACAGGTAGACGCCAACGAGCACACCACCTATTACGAGCTGTCTAGTGCCAAGTTCGATTACGTAGAGGATACGGCAGCAAAACATGACGCCAGCACCACCGTCGCTGAACTAGTCAGCTACGACAATAGCCCTGAGCAACAGGAACGAGTCGACGACGAAGCGGAAGCAGAAGTGGAGGAGACATATACTCAGCTCATTTACGCCGAAGAAGTCGGCGGCGTGGAGGACGCTACGCAGCAGGACGCAGAGCAAACCGATTACTTCATCTACAGCAACGAAGATGGCGAGGCGGAAATTGTTGCGAAGCGTATGGCTGTACCGTCGAGCGAGACCGACAAGGGGCAGCCGGCCAGCGGAAAACGTGAGCAAAAGTGCGTCGAATGTGTAATGACATTCGTCAGCGCCAAGAATTTGAGGCGGCACATGCTGAAGCGCCACGGCCGTACGACTGATGAGACGCTGCAGCCGGTTAAGCCTGAGTTGAGCGACAGCGTCACGACCAACGCCCAGACAGTGGTGGTTACAACTGCAGCTACAGTAGAGTCGGGGACAACCACAATAAGCTGTGCTTCGGGCAGCGTTTCTGCACCGCCGCAACCGATCGTGACGACCACCACGCCTGCGAAGCTGTCCTTCTTCTGCGACCGCTGCAATGCTGGTTTCGCGCTGCAGAAGTCTCTTGTGTATCATCGCAACCTGAAAGCGTGCACCGCGCCTACCTACAGCTGTGACGAATGTGAGCGTGTCTTCGTATCGGCCGAAACGCTAGCGGAGCACAAAACCACCCACCTGTTAGGCAACGTCTGCAACGAGTGCAACAAAGCGTTCGAATCCAAGGACGAGCTGAGCGAACATCTCATCACCGAGCACAATCGCAAACAGCGCAACCAGTGCTGTGTCTGCAAGAAAGTATTCACCATGCTGTCGGCGCTGAAGGATCACATGCGCGTACACAGTGGCGAGAAGCCATACCTGTGCCCGCTGTGCGGGAAGGCGTTTAGCCAGAATGCGAACCTGAAGCAGCACGTAATGCGTCACTCCAAGGAAAAGAAATTCAAGTGCGACGACTGCGCTAACAGCTACGTGACAAAGGCTGAGCTGTTCTCGCACAAGCGCACCCACACCGGCGACCAGCCGTTCAAATGCGAGTATTGTAACGCCAGCTTCACCACGTCTAGTTCGCTGGTGAAGCACAAGCGCAAACATACCGGCGAGCGCCCGTACGCCTGTGACATTTGTCCGATGCGCTTCACTGCACTCAACGTGCTCAAAAATCATCGGCGCACACACACTGGCGAGAAGCCCTTCACTTGTTTCTACTGCAACAAGGGTTTCACACAGAAGGGCGACTGCCAGATCCACCAGCGCACACACACCGATCGCAACTATGCCTGCTACTGCGGCGACAAGTTCGCCAACCTGGCTAAACTGCGCACGCACATGAAGACACACAAAGGCGATGAGGCGCAACGTCGGGACGCTGTTCCTGCGGACGACCACGTGGGCGAAGCTCGGTCAGTGCACTTCACCATCTTAGAAGTAAAGGACGAAGATGGCGGTGACATTGGAGCGGACGCAGAAGATGCGTCCGAAGGTCACTTGGCGGCAGTAGATGGCGCCGACGATGAGGAGTTCCTGCATGTGACCATGGAGCAAATGTGA
- Protein Sequence
- MDVEKICRTCLGLNGPLLSIYDGTGGGGGGCIADMLRDFTKTKPQPADSLPQKVCLSCISEINRCYSFKMKCENSNRTLRQLLPDALPEEPDKSCKPPIVQADKYVQTSGPESKAMQTQTQVHDVTQTVQTINADKTAAPVTLGRDSKLCTTRKKAIMEKETASSSPAQFVEYGARRSRRTVGAVKRKRSESPDVTDLPNGSEIIMEVQADEMDTEACVDVPDGDTGTTVYAALRAEQVDANEHTTYYELSSAKFDYVEDTAAKHDASTTVAELVSYDNSPEQQERVDDEAEAEVEETYTQLIYAEEVGGVEDATQQDAEQTDYFIYSNEDGEAEIVAKRMAVPSSETDKGQPASGKREQKCVECVMTFVSAKNLRRHMLKRHGRTTDETLQPVKPELSDSVTTNAQTVVVTTAATVESGTTTISCASGSVSAPPQPIVTTTTPAKLSFFCDRCNAGFALQKSLVYHRNLKACTAPTYSCDECERVFVSAETLAEHKTTHLLGNVCNECNKAFESKDELSEHLITEHNRKQRNQCCVCKKVFTMLSALKDHMRVHSGEKPYLCPLCGKAFSQNANLKQHVMRHSKEKKFKCDDCANSYVTKAELFSHKRTHTGDQPFKCEYCNASFTTSSSLVKHKRKHTGERPYACDICPMRFTALNVLKNHRRTHTGEKPFTCFYCNKGFTQKGDCQIHQRTHTDRNYACYCGDKFANLAKLRTHMKTHKGDEAQRRDAVPADDHVGEARSVHFTILEVKDEDGGDIGADAEDASEGHLAAVDGADDEEFLHVTMEQM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -