Mcra009965.2
Basic Information
- Insect
- Melieria crassipennis
- Gene Symbol
- hang
- Assembly
- GCA_963668005.1
- Location
- OY764962.1:6575896-6584966[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.066 6.2 8.1 1.3 3 23 445 466 444 466 0.93 2 19 0.16 15 6.9 3.8 3 22 571 590 569 590 0.90 3 19 0.011 1.1 10.5 1.3 1 22 665 686 665 688 0.90 4 19 4.5 4.2e+02 2.3 1.6 2 21 728 747 727 750 0.87 5 19 0.0013 0.13 13.4 0.2 3 23 818 839 817 839 0.96 6 19 3e-05 0.0029 18.6 0.1 1 23 847 870 847 870 0.97 7 19 3.3e-05 0.0031 18.5 0.1 2 23 959 980 958 980 0.97 8 19 0.18 17 6.8 3.2 2 23 1046 1068 1045 1068 0.94 9 19 0.0045 0.43 11.8 0.2 2 23 1077 1099 1076 1099 0.95 10 19 0.00083 0.079 14.1 0.2 1 23 1112 1135 1112 1135 0.96 11 19 0.00014 0.013 16.5 1.1 1 23 1191 1213 1191 1213 0.99 12 19 0.0022 0.2 12.8 0.9 1 23 1221 1244 1221 1244 0.96 13 19 0.03 2.8 9.2 0.1 2 20 1252 1270 1251 1270 0.95 14 19 2.1e-05 0.002 19.1 0.4 3 23 1344 1364 1343 1364 0.98 15 19 0.00013 0.012 16.6 2.0 1 23 1399 1421 1399 1421 0.97 16 19 0.00015 0.014 16.4 0.5 2 23 1475 1497 1474 1497 0.92 17 19 7.5 7.1e+02 1.6 0.3 2 19 1517 1534 1516 1536 0.89 18 19 0.065 6.1 8.1 0.7 3 23 1552 1572 1552 1572 0.98 19 19 0.00055 0.052 14.6 1.4 1 23 1769 1791 1769 1791 0.98
Sequence Information
- Coding Sequence
- ATGATGTGTATGTATGCAGTTGTGTGCTTTCGCGTACCTGAGCGCACGGCCGCCGTATCACCTTGTCCCAAGCTGGCGTCTGTGTCCACTCAATGGCTGGCTGTATCGTTGGTCTTTGCTTTGCGTTGCTGTTTTCAGACGCTTGTACTTTATTTTGCTAAGGCATTGTGCACTGCCACTGGTCCCATTTCTCGTTTCTGTGTACATAACCTCATCCGCACCAGCAGCCACGCTGTGCGCGCGCTGAACTGTGAGCCACGAGTCCACAAGTGTAGCAGCGGCGCATGGCGCACGGCGTACAGCAGCCACAGCCGTAGCAACGAGTTGGCAACAGCTGTCGCTGTGCCATCCGCCTGCCCTGCAACTCTCTCCGTCCGGCCACGGCGCGTCTCACCTAGCGCTACCCTCTGCTACATATCGCCCACTGATCGGCTCTCGTTGCGCATATGCCATGCATGTATAAGTTACCTGAATTCGTGGCAGAGTTTCAAGAATCGCTGCGTTGCCTCGCAGAATAAACAACGCAGCTGGCTGGACTTTACCAAGCGTCAACAGTTAATTGAGAACAATGTCAGCATATCGACTATTAGTGGTGAAGCAACGGCACAGCAGCACCATCATCACCAGGAGACGTCGCAGCATGAGGGGCAGGAGGAGCACTCTAATTTGGCATCTTCAATACTGGACGGCATATCGTCGCTTAAGAAACGCAAATCCCTAACAGTCTATGTGAGTcctaaaaccaaacaaaaaccacaGTTTCATCACGTAAAAAAGCACCTGGCGCCGGACAGGCAAAAGTACTGGGGCAAACAATTGTTGCCCGTGTGTGCGACGCAGCAGTCACATCCGCATCAGCAGCCATATAAATCGAGATCACACTATcagaagcaacagcaacatttgcACGAAATGCAAAAGTatcaaaagcagcagcaacagcagcagcaacaacaacagcaaaaacagcagcagcttATGCTGCAAGAACAGCaactgctgcaacaacaacaaaaacaacagcaactgccAGCAAAAATGCCTGCTGCAGCTCCAATCATTCAAAGTTCTGCACAGCAGTTGCGTTTGTTCAGACGTTACTCGTATAATCCGTTACCAGCCGTTGAAATCAAGGATGAACCTGTCGATACAGACGATGACTACAACGCCAAGCAGCACGACGAGTCCGATGAAATGGTCGATCCTACACTTTTTCTGGAGCGCACCGAAGAGGAGGGCGATGAAGCGCTGATGGATACCAGTAGCTTCAATTACGAGAATGAGCGTTCCACTGTGGAGTTAGCCGCTGCTGCCGAGGTTAAGGAGGCTTCCTGTCGCGCttgtaatttgaaattttctacaCGTGCGAATGCACGTCGTCACGAGCGGAATTTGCATCCGAATCTTTTTGAGTTGACAACCTCTTCGCCGAGCAACATTCTCGTCACCAAACCAACGCCAGCACTGGCCGCCGCTTTAGAGTTGCAGCGTGCTAATGCCGCCGCAGCTGCTGCTGAAGCGGCTAAGGCTTCAGGTGCTGTCATAACGCCGCAGAAATACCGTCAAGAGGTGGTGAATGCGTTCAACAAGTGCGAAATGGGCGGCTATGACTATGAGAATCCGGAAAAGTACCAACACTATCTTACTGACGAGAAAATCGTGTTTTTGCAACAGAACCAGGACTTCTTACAGCAATACCAGAACATGACCTGTCGCTGCTGTAACAAATTTTACTCCACCTACAAGAACTTTATGGCACACATGCGTAAGAAGTACGCAACTCTGCCACGCAATCTTTGTTTCAACTGCCTGAAGCTAAATGATTCGAAAGCGCTTTTCATATCGCACTTGAAGCGTCGCAATTGCATCAACCTGTATAAAGTACTGCACGCTCTCATGGCGAAGAACGCTGGGTTCGCGGCGGCTGTTACAGCCACAGCGGCGGCAGTGCCGGACAAGCTGCGCGCCAAGGAGTTGCTGGTGAATAAAATGTACGAATGCAAGTTGTGTCCGAAGAAATTCCGGCTAAAACTTGAGTTCCGCACGCACGTGTATGACGAGCATGCTGATGCGCAACGCAAGGACATTGCGCAGAAGCAGTGCTGTTTCTGTGGACTTGAACTGGAGGACCCAACGGAACGAAAACGACATTACAACAACATGGACTGCATTGTGTCGTTGCGTTGTGTGACGTGCGATGCGAAGTTCGACAATCATCAAAAGTTTTTGGATCATGTGTACGACAAGCACTTAGCTGGCTTCGGTGAACAGTCGCAGCTTCAGCAGCCGCAGCAAGCGGGCGGCACAGGTGGCGGCAGTGCAGAGAATTCACCTGGTAAAAAGTCAAGTGCAGGCTTGGGAGGTACTTCATCCACAGACGAGTCACGTAGCAGCCAAGCGGCCACATCGGCACCTCCAAAGTCTCAGTACTTCTCCCGCATGCCTCAAGCGTGTCCGATTTGCGGTCAACAAtacaataattacaacaacgtCTTGCGCCACATGGAGTCAAAGCACCCTGACCAGCTGCCGCAGACGTACAAGTGCGTCAAGTGCGGCATAGGCTATCCACGCTTGTCGAACTTGCGCGAACATATGGTGACCGCGCATGCAGCGGATAAGGCGCGCCACACCGGTTTCGAGTACATTGTGAATGCTGATGCCGTGAAGATTGCCGATGGTAGCGCGCCCAATGTTTATACCGGCCGCTACGACTACGTTATGAAAGATTTGATGTCAATAACAAATGGTGGGACAATCGCCGATGACGAGGACAACTGTAGTGACAATGCTGCGAAAAAAATGCGTTTGGACAACTCTGCAAACGTCAGTGGTACCGGTTCAAACAGCGGCAACATGTACAGTAGTCTCAAGGAGTGCCCTGTTTGCAATGCTGTGTTCAGCAACAACATCGGCCTTTCCAATCACATGCGTTCGCATACTGCCGCCGCACAAAATGCTGCATCGGTCGCGCATTCGGCCACCCGGTCCACGCCCAGTTCATTGACCATAACCGCCACCGCTGCTCCCAGCAAGCCGACATCGCCACCTGTGATGCAGGCTCAGACTCCTGCGCAGAAGGCAATCTTTAAGCGCAGCCTGGAACAGGCGGCCGACCGTCGTTTCCGTCGCATGCGTTGCCGCCTCTGTCAACGACGTTTTTCATCGAAGAAGTCGTACCGCTTCCACATGCTGAACGACCATCAGATACGCAATGTGCAGTTTATTAAATGCAAGTTGTGCGACGCGGAGTTTGCCTACGAGAAGGGCCTCAAGGTGCACATGTTCAAAATACACAACACGCTGCTTAAGGACGAGATGATTATCAAGCAATTCGAGTGTGATATCTGTTCAATTGTCTATCGCACAGAAGACCAGCTACTGCAGCACAAAAAGAATGTGCATGGCAATAAGGATGCGAAGGCGGAGGAATTCGACGAAACACTGGGCGCGGAAACTAGCTCTGCCGGTGCAGACTTGTCGGGAATATCGACGCCGGTGAGTGGCGTCGGCGGCGCTGGCGATCGTAGCGTGTTGGACTCTGCGGGTACGAGTGGACCGCTCTACTGGTACCAGTGCAAGTATTGCCCATCGAACTTCAACACCAACAAGAAACTGGCCATTCACATCAACTCGCACGACGAGTTCGATTCGAACGACTACTCGTGCAAAGATTGTGGCAATGTGTATAGCGGTCGCAAGAGTCTATGGGTTCATCGCTATAAGAAGCATCCACAGATCGCCGAGCCATCGGAATGTGTGCTCTGTAAAAAAGTTTTCTTCGACAGTCAAATGCTGGAGAATCACATTCCCACATGCAATCGGAAACCAATAACTGCTACTGGCGCCGTGGCAGATGGAGGAGTGGCAGGTGGTACAGTTTACAAACACAAAACGGGTGATGACGAAGAGGACGAGGTGTCACACGATGGTGACGGCGCTATAACGACAGCTGCATTGGGTGGTGGCGAATTGGAGATAACACCGATTCCGGCCGCTAAtctgaaaatcaagtttcccgAGGTTGCGTGCACAATCTGTGGGCAGCGCTTCACCGACCAGGAGCTTTTCTCCAAGCACATCCAAATGCATGAGATGGAGCTGTACACTGACAATCCGCTGGCCGCCATGTTCGACACGGGTCCGGCGGATCCCAATCAGTTCTACCTTGATCGGGTGAACGACAACGGCGAGTACGCCTGCGACTTGTGCCACAAAACCTTCACACAAATGACTGCACTTAAAGTGCATCGAAAATGGCATTTCAGAGGTGATAGCAAACAGAACCAAGTCGAAGCCGATTCCACAACCAATGCGAGCCAGATCCAGACCAACCATCAACGTCTACTGGGATTACAAGCAGTGGGCCTTATGCCCAATCCGCGACCATCTTCAAAATCCCAGAAACGCAAACGCGAACTTAAATGCGAATACTGCCCGTCCACattcatcagcaacaacaacctgcGCCGTCACATCTACGAATTGCACAAGGACGAAATTGGCAATTTGCCGGAGCCGCCGAAAATTAAGACAGACGAGTACTTGAAGTGCCGCCGATGCAGGCAAAAATTTGATACAAAGCTCGAATGGATTGAGCATAAGGTGGCCGATGCACGCATCATGAAGCCATTTGGTCCTTTTCAGTGGGGTTGTGATTTGTGTGGAGCGTACGTGTCGCGCAAAGAGAAACTGATCAATCACATACACAATCACATGAAGGAGAAAGTGATATTGCCGGTGGAACAGCAGCAAAATCAGGCGGAGGAAAGGGCCGAGAGTAGGGATGCTAAGAGGCAGCACAACGCAAAGGCAGAGTCGGAAGACGGCGGTAAGGAAGAGTCTGAGGATGATGGTGTAGACGAGGGTGACGGTGATGCCGAGGGTGAGGACTATGATGAGGAGGTCGACGAGGATGGGTTCGAGGATGAGGCAGAGGAGGACGATGACGTAGATGAGGCAGGCGAAATTATGAACGTAAATGAGAATGCCAACGATGGGCagcacgacgacgacgacgaagacGGTGATATGGAAGTGGATGAGGAAGACGACGACGAGGGCGATGTGGAGGACACGAACGACGATGAGACAAGTGAGGCGAAGACTCCAGTAGCGTCGAAAATTAGCATAAAAGCTGCCGGCAATTCGGGCGATACTACGGAGGCAGAAGATTCGCCCTCGTATGCAGgtgacgacgacgatgacgacgacgacaacgatgaCAACGACAGCGAGGCAGATACGGATGGGGATAGTGAGAGCTCGGCAGAGCAGGTTAAGGAACCGGTTGCAAAGACGCGTTTCTCGTGCGATCTGTGCCGGCTGTTCTTCGATACGCAACAGGAGCTGCAGAAGCACGTGAAAATGCATTTCCTGAATGGACCTGGCTCGGTGACACTAACCGAAATCAAACCAAAGGCGACCAACAAGAGTCGCAGTAGCAGCAGCGACGTGGTGGCAGTGTAG
- Protein Sequence
- MMCMYAVVCFRVPERTAAVSPCPKLASVSTQWLAVSLVFALRCCFQTLVLYFAKALCTATGPISRFCVHNLIRTSSHAVRALNCEPRVHKCSSGAWRTAYSSHSRSNELATAVAVPSACPATLSVRPRRVSPSATLCYISPTDRLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLDFTKRQQLIENNVSISTISGEATAQQHHHHQETSQHEGQEEHSNLASSILDGISSLKKRKSLTVYVSPKTKQKPQFHHVKKHLAPDRQKYWGKQLLPVCATQQSHPHQQPYKSRSHYQKQQQHLHEMQKYQKQQQQQQQQQQQKQQQLMLQEQQLLQQQQKQQQLPAKMPAAAPIIQSSAQQLRLFRRYSYNPLPAVEIKDEPVDTDDDYNAKQHDESDEMVDPTLFLERTEEEGDEALMDTSSFNYENERSTVELAAAAEVKEASCRACNLKFSTRANARRHERNLHPNLFELTTSSPSNILVTKPTPALAAALELQRANAAAAAAEAAKASGAVITPQKYRQEVVNAFNKCEMGGYDYENPEKYQHYLTDEKIVFLQQNQDFLQQYQNMTCRCCNKFYSTYKNFMAHMRKKYATLPRNLCFNCLKLNDSKALFISHLKRRNCINLYKVLHALMAKNAGFAAAVTATAAAVPDKLRAKELLVNKMYECKLCPKKFRLKLEFRTHVYDEHADAQRKDIAQKQCCFCGLELEDPTERKRHYNNMDCIVSLRCVTCDAKFDNHQKFLDHVYDKHLAGFGEQSQLQQPQQAGGTGGGSAENSPGKKSSAGLGGTSSTDESRSSQAATSAPPKSQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGIGYPRLSNLREHMVTAHAADKARHTGFEYIVNADAVKIADGSAPNVYTGRYDYVMKDLMSITNGGTIADDEDNCSDNAAKKMRLDNSANVSGTGSNSGNMYSSLKECPVCNAVFSNNIGLSNHMRSHTAAAQNAASVAHSATRSTPSSLTITATAAPSKPTSPPVMQAQTPAQKAIFKRSLEQAADRRFRRMRCRLCQRRFSSKKSYRFHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIIKQFECDICSIVYRTEDQLLQHKKNVHGNKDAKAEEFDETLGAETSSAGADLSGISTPVSGVGGAGDRSVLDSAGTSGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQIAEPSECVLCKKVFFDSQMLENHIPTCNRKPITATGAVADGGVAGGTVYKHKTGDDEEDEVSHDGDGAITTAALGGGELEITPIPAANLKIKFPEVACTICGQRFTDQELFSKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGEYACDLCHKTFTQMTALKVHRKWHFRGDSKQNQVEADSTTNASQIQTNHQRLLGLQAVGLMPNPRPSSKSQKRKRELKCEYCPSTFISNNNLRRHIYELHKDEIGNLPEPPKIKTDEYLKCRRCRQKFDTKLEWIEHKVADARIMKPFGPFQWGCDLCGAYVSRKEKLINHIHNHMKEKVILPVEQQQNQAEERAESRDAKRQHNAKAESEDGGKEESEDDGVDEGDGDAEGEDYDEEVDEDGFEDEAEEDDDVDEAGEIMNVNENANDGQHDDDDEDGDMEVDEEDDDEGDVEDTNDDETSEAKTPVASKISIKAAGNSGDTTEAEDSPSYAGDDDDDDDDNDDNDSEADTDGDSESSAEQVKEPVAKTRFSCDLCRLFFDTQQELQKHVKMHFLNGPGSVTLTEIKPKATNKSRSSSSDVVAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -