Mcra006271.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melieria crassipennis
Gene Symbol
-
Assembly
GCA_963668005.1
Location
OY764961.1:101530036-101535169[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.00042 0.04 15.0 0.7 1 23 270 292 270 292 0.97
2 28 0.00028 0.026 15.6 4.2 1 23 298 320 298 320 0.99
3 28 0.0095 0.9 10.7 0.5 3 23 355 375 353 375 0.96
4 28 0.0021 0.2 12.8 2.5 1 23 451 474 451 474 0.95
5 28 0.61 58 5.0 1.6 1 22 481 502 481 502 0.96
6 28 0.00017 0.016 16.2 0.2 2 23 552 573 551 573 0.96
7 28 0.00016 0.015 16.3 1.7 1 23 580 603 580 603 0.96
8 28 0.0046 0.43 11.7 0.8 2 23 611 632 610 632 0.95
9 28 0.044 4.2 8.6 0.2 1 20 715 734 715 735 0.94
10 28 1.9 1.8e+02 3.5 4.2 2 22 747 767 746 771 0.93
11 28 4.4 4.2e+02 2.3 0.3 1 23 776 799 776 799 0.92
12 28 9.2e-05 0.0087 17.1 0.2 2 23 815 836 814 836 0.97
13 28 3e-07 2.8e-05 24.9 2.0 1 23 843 865 843 865 0.98
14 28 9.2 8.7e+02 1.3 1.6 11 23 913 925 903 925 0.73
15 28 7.7e-05 0.0073 17.3 1.2 1 23 1009 1032 1009 1032 0.96
16 28 0.036 3.3 8.9 1.5 1 23 1069 1092 1069 1092 0.98
17 28 2.1e-05 0.0019 19.1 3.8 1 23 1106 1128 1106 1129 0.95
18 28 0.0048 0.45 11.7 1.0 1 23 1135 1157 1135 1157 0.97
19 28 1.3 1.2e+02 4.1 0.0 3 20 1185 1202 1183 1203 0.94
20 28 0.018 1.7 9.9 3.2 1 23 1251 1274 1251 1274 0.98
21 28 6.4 6.1e+02 1.8 0.4 1 22 1281 1302 1281 1302 0.91
22 28 0.003 0.28 12.3 0.2 1 23 1311 1334 1311 1334 0.96
23 28 0.00041 0.039 15.0 2.9 1 23 1363 1386 1363 1386 0.98
24 28 1.7e-05 0.0016 19.4 0.2 2 23 1423 1444 1422 1444 0.95
25 28 0.00084 0.079 14.1 3.0 1 23 1450 1472 1450 1472 0.99
26 28 4.5e-06 0.00042 21.2 5.4 1 23 1478 1500 1478 1500 0.98
27 28 7.9e-07 7.5e-05 23.6 2.4 1 23 1506 1528 1506 1528 0.99
28 28 0.0016 0.15 13.2 0.1 1 22 1534 1555 1534 1558 0.90

Sequence Information

Coding Sequence
ATGACAAGTGCGTCTGGAAAGGTGCGCACTCAGTGTCGCACTTGCTATGAAACAACTGCCAGCCATTTCTACCCACTCAATGATCGTCTGGACGAGGAGCGATTTCCGCAGAAGTGTCTGGCGGATTTGCTCTGGGATGTGGCGAAAATTGATGTAAAAAGTGGCTCCGACAAGGCGTTGCCCATGCAGTTGTGTGGGAACTGCTCGCGCAAGCTCAAGAACGCCTACTCCTTTGTGATGCAGGCGCAACATGTGAATGAGTACTTTTTGGCAAACATACACGAGGACGGCGAAAAAGACGTTACACATCGCGAGGGCAAAACCGTTGATTGTCTGGTGGAAGCGCCCATCGATATACCAGGCGGACAGGGGTTGCAAATAAAGATGGAGGTATGCGAGGATAATCTGTACGACGCCCTCAATGCACTTACTGTGCCCGGGCCAGAGCAACGCACTGCGACTGAAACCAGCAAGAGACCATTGCGAGAGAGAAGATTTAGTAGCACAATGAAGAAGGAATCGGGGCAGGAGTTTGTTGCAGACAGTCAGGAGGCAGCGAGCAGCTCCACAGCAGCGCAAATGAAACTCGATCCAATCACAGTGGCCGAAACGAACTGGCAACCTGAAGTAGAGGACGACGATAGCGCTGAGGCGTTTGAGCAGCCGGAACAGAGTGATGCCGAGCAAAGTGAAAGCGAAGTCGAGGAGTACAAGCCGAAGCGGCGTCGCGGTCGTCCGCGTCTAGCCAAGCGTGAGAAGGTGCGCAATGCCGACAATCAGGTGATCGGCAGCAAGGAGCGTGGCCGCTTCCGGTGCGACATCTGCAACAAGTCCTTTGCTTGGAAAAAGGATCTCTACCGCCACGCTGACACGCATTTTGGCACGCCCAAGTTCAAATGCGAGTACTGTGAGCGGCACTTTCTGCGCAAGGACAAGCTGAAGGACCACATGCGCATACATGCGAAGCGCAACAGCGCCGCCAGTACGCAACGCTCGCAGCGCCATCCCGAGTGGAACTTCGCCGAACGCCTGTACTCGAGTCAGCGTTTTCGTTTGATCTGCTGCAAGCTGTGCGAAGGCAGTTTCCAGTCTACTGCCGCACTGCGTGCGCACATGCAAGTGCATGCGGAGCCGCAAACGCTGGCGCTGCAGCTGGACAGCGAGGTAGTAAAGGAGCTATTTCCACTTGCTTGCGCCGCAGAACAGCTGAACGAACTGAAGGCGAGCATTAGCCAGGACATTGTACAGCAGCGGCTGGCCAAGTATTATGCGGTGGTGAACGCGCACGGCTATGAGCTAAGCCTCAGCGACTCGGATGCCGATGCCGAGCCAGACGACGCCAAGCCGCGTTACTACTGCGAGCTGTGCGAGCTGTCATTTGCGCGCAAGCATCAGATCTTCAAGCACATGACGCAGGACCACGCGCTCGACTCGCTGCCCTACAAGTGCAACGTTTGCAAGCTGGACTTTGTTTGCAATCGCATGTATGCGTTGCACATGCGCACTCAATGCCGCAGTAAGGAGAAGAAGTACCAGTGCCTGAAGTGTCCGGGCAAGTTCATGTGGCTGGAGAATCTGGAGGGCCATCAGTGTTCGAACAAGTTCAACACACCCGAGTACAAGGCCCAGTTGCCGCTGAAGCGCGACGTGCTGCCGTGCACTGTCTGTGGCAAAACTTTCGTGTGGGCCAAGGACTTGAAGCGGCACCAGGAGTCGCATGCCAGCGACGGCAGCTTGCACGAGTGCGCCATCTGCCTGCAGCGCTTCCGCAAGGCGGAAAACCTGCGCCAGCACATGAGGCAGTCGCACGAACAACTGAAGCGACGCATCGAGTGCGCACTGTGCGATAAAAAATGCGACACGCTGCAGCAACTCCGCGCGCATCTGCTCCAGCACGCCGATGGCTGCAGCGGCGTGAATGTGACGGAGGGCAAGTACTTTAAGGTGTACTGGCCACAGGGCGTAGAGGGACGCGAGACTGAAATGACTGGCAGCATTATGTCGGACTTTGCTGCACAGCAGCTGTCGCGCTACTACTCGGCGGTCGATGAAAGCGGCAACGAGCTGGAACTCGACGACTCCGAAACGGACGCCGAAGACGACACAGCGTCGGACGAGTGTGGCGAAGTGGCGTCCACGAGTTACGCCTGCGAAGTGTGCGGCGAGGCATACGATCGGCGTAAGCGCCTGTTGCTGCATCAGCACTGCGAACACGCCGACATGGACACCCTGCCACAGCAGTGCGCCAACTGCAATAAGCAGTTTGTGTGTCTGGCTTTGCTGCAACAGCACCAACGACGCGATTGCCAGCATAGAGAGAAGCGCTTCCAGTGCGTCAAGTGCGCGGTGCGCTTCATGTGGGAGGAGAACCTGCAGCAGCATGAGCAGTTGAAGCACATTGACCCGGAGCAACAGATCAGCCGTCAACTGGCCAACAAACTGCAGTGTGACGAGTGCGACAAGGTGTTCATTTGGCCGAAGGACCTGACGCGCCACAAGCGCGTGCATATGCCAGATGACGAGAAGTTCGAGTGCGACTACTGCGACCGCAAATTCAATCGGAAGGACAATCTGCGCTCACACCTCAAGGTGCACGGGGCAGCGGTGGTGGCTGAGGCGACGCGTGGCAGCAAAAAGGAACAGCGCAGGTCTATGAAGTCGAAAGGCGTGGACATCAATCTATGCAAACCGCACGGCTGCAAATGCATCCAGTGCATGATTTGCTTGTCAAAGCATTCGAAAATCGCCGACTTACGAACACATCTGCGCACCCATCAATACGTGGTTTCCTTTGCGCAACGTGTGGAGCCCATAAGCGAGCTTTCGCTACTGCTGTATCCGGATGAGCCCGTCATGGAAGAGAACAAGTTGATTGCGCGCATCATGGCCGATATTGCGGCTCAGCAGCTGCACAGCAGTTTCTATTCGATTACCAATGAAGTGGGCTACGAACTGGATCTGGACAGCTCCGAAACGGAAAGCGACTCAGAGGCCGAGGGCGAGACGAAGGAAGACGGCAACCCATATGTCTGCGATCTATGCAAAGAGTCATTTAATCGCAAGTACAAGCTCTTCGAGCACCAGCAGTTGGCGCATCGCTGGGAGGACGCGCCGCACGTTTGCAATCATTGCAACGCGCGTTTTGTGTGCCGGAAGCTGCTACAGCTGCACTGCCGTCAGCAGTGCAAGAACACCGTGAAGCGCTACTCGTGCCGCAAGTGCCTGCAGCGCTTCATGTGGAAGGAGAATCTAAAGATGCATTTGCGCACCGCACATCCCGATCTGGACGAAACAAAGAAGGATGTGCCCGAATCGTACGACTGCAATGAGTGTAATCGTTCCTATAGGCTGAAGAAAGATCTCACTCGACATCTGCGTATGCATCACAGCGATGCCACAATCTTCAGATGCCTCTGGTGTCCGCGACAGTTCTTCAAGCGCGTCAACCTGAACATGCACCTAAGCCTGCACGGAATCACTCCGGAGCAGCTGAACATGGCCGAGTGCCACATTAATGCAAGCAGTGGCCCCAATGGCCACAAGCAGATCTTCTGCCGTGTGTGCAGTTTGCAGTTCAACAGCATAGCTGCACTGCGCGCGCACCTGGTGCAGGAGGCCGCCTCCGCGTTGTCCACGCATCACGACTACAACTCGCTGCAAAACTACTCCATCACCAATGAGCGCGGCTTTGAGCTTCAAATCGACGACTCGCACACGGAGGACGAAAACGAGAGCGCGCAGCAGCAAGTTTACACCTGTGTGCTGTGCACGCTGAGGTGCAAACGAAAATACCAGATGGCGCTGCACCAGCGCTCCATACACAAGCAGGAGCAGTTGCCCTTCAAGTGCGAGAAGTGCATTTTTCGCAGTGTATCGGCAGACATACTGGAGCATCACATGCGCACGCAGTGCTACAACAACGAGAAGCAGTACGAGTGCGAAAAATGTAACCTCAAGTTCATGTGGCCGGAGAATCTGCAAGTACACATGCAGCTGATGCATCCGGGCGTCGATGAGTTGGCTGTCGAACCCAACGAGAACGCCGACGACAATAGTAGTACAACCGCGCCGACTGAATCTCAGATGTTCCGATGCGATCGCTGTCCGCGTCACTACAACCGCAAAGATCGCCTCACCGCACACATCAAAAAGGTGCACATCGAAGGCGCCACTGACGCCGGTTCCAGCAAGGCGTTAGCCAAACCTAcagttgccaaaataaaacGCAATGCCACCGATTCGAAAGCACCTATGGAGAAGAAGTTTCTGTGCGCGTTTTGCGGGCGCGCTGTCACCTCGTCGTCGAACCTCATCATACATATGCGCCGTCACACTGGCGAAAAGCCGTTCAAGTGCGATTTCTGCGACATGGCTTTTCCGCGCTCGTCCGATCTGAGCTGCCATCGACGCACGCACACCGGCGAGAAGCCACATCGTTGCACCGTGTGTGACAAGGCTTTCTCGCGCTCCTACAAGCTTCACACTCACATGCGCATACATTCCGGGGAGCGGCCCTACAAGTGCACCTACTGTGAGAAGAGCTTCACGCAGTCCAATGACCTGACGTTGCACGTGCGCCGGCACACTGGCGAACGGCCATATGTGTGCGGCATTTGCGGCGAGCGTTTTATACAGGGCACGGCGTTGAAGAATCACCGCACCATGCGCGGCCACTATGAGGATGTGGAGCCGCGGCGCTCAACGCTATTGGAGCAGTTTTAA
Protein Sequence
MTSASGKVRTQCRTCYETTASHFYPLNDRLDEERFPQKCLADLLWDVAKIDVKSGSDKALPMQLCGNCSRKLKNAYSFVMQAQHVNEYFLANIHEDGEKDVTHREGKTVDCLVEAPIDIPGGQGLQIKMEVCEDNLYDALNALTVPGPEQRTATETSKRPLRERRFSSTMKKESGQEFVADSQEAASSSTAAQMKLDPITVAETNWQPEVEDDDSAEAFEQPEQSDAEQSESEVEEYKPKRRRGRPRLAKREKVRNADNQVIGSKERGRFRCDICNKSFAWKKDLYRHADTHFGTPKFKCEYCERHFLRKDKLKDHMRIHAKRNSAASTQRSQRHPEWNFAERLYSSQRFRLICCKLCEGSFQSTAALRAHMQVHAEPQTLALQLDSEVVKELFPLACAAEQLNELKASISQDIVQQRLAKYYAVVNAHGYELSLSDSDADAEPDDAKPRYYCELCELSFARKHQIFKHMTQDHALDSLPYKCNVCKLDFVCNRMYALHMRTQCRSKEKKYQCLKCPGKFMWLENLEGHQCSNKFNTPEYKAQLPLKRDVLPCTVCGKTFVWAKDLKRHQESHASDGSLHECAICLQRFRKAENLRQHMRQSHEQLKRRIECALCDKKCDTLQQLRAHLLQHADGCSGVNVTEGKYFKVYWPQGVEGRETEMTGSIMSDFAAQQLSRYYSAVDESGNELELDDSETDAEDDTASDECGEVASTSYACEVCGEAYDRRKRLLLHQHCEHADMDTLPQQCANCNKQFVCLALLQQHQRRDCQHREKRFQCVKCAVRFMWEENLQQHEQLKHIDPEQQISRQLANKLQCDECDKVFIWPKDLTRHKRVHMPDDEKFECDYCDRKFNRKDNLRSHLKVHGAAVVAEATRGSKKEQRRSMKSKGVDINLCKPHGCKCIQCMICLSKHSKIADLRTHLRTHQYVVSFAQRVEPISELSLLLYPDEPVMEENKLIARIMADIAAQQLHSSFYSITNEVGYELDLDSSETESDSEAEGETKEDGNPYVCDLCKESFNRKYKLFEHQQLAHRWEDAPHVCNHCNARFVCRKLLQLHCRQQCKNTVKRYSCRKCLQRFMWKENLKMHLRTAHPDLDETKKDVPESYDCNECNRSYRLKKDLTRHLRMHHSDATIFRCLWCPRQFFKRVNLNMHLSLHGITPEQLNMAECHINASSGPNGHKQIFCRVCSLQFNSIAALRAHLVQEAASALSTHHDYNSLQNYSITNERGFELQIDDSHTEDENESAQQQVYTCVLCTLRCKRKYQMALHQRSIHKQEQLPFKCEKCIFRSVSADILEHHMRTQCYNNEKQYECEKCNLKFMWPENLQVHMQLMHPGVDELAVEPNENADDNSSTTAPTESQMFRCDRCPRHYNRKDRLTAHIKKVHIEGATDAGSSKALAKPTVAKIKRNATDSKAPMEKKFLCAFCGRAVTSSSNLIIHMRRHTGEKPFKCDFCDMAFPRSSDLSCHRRTHTGEKPHRCTVCDKAFSRSYKLHTHMRIHSGERPYKCTYCEKSFTQSNDLTLHVRRHTGERPYVCGICGERFIQGTALKNHRTMRGHYEDVEPRRSTLLEQF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-