Basic Information

Gene Symbol
TRERF1
Assembly
GCA_963668005.1
Location
OY764961.1:131937539-131951387[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-11 5.9e-08 33.3 0.0 2 45 1759 1802 1758 1803 0.94

Sequence Information

Coding Sequence
ATGTGCAGCGCCTCCGTCGGCACCGAAGGCTCCGTCACGCTTCAGCTGCGCGACGCCAACTCCTCAGACTCGAATCAATCGTCGGCACCGACATCGCTCGAAAATGCCTTGACCATCGGCTATCCGGACCCGGAGATGTTGGCCGACGTTTTGGGCACATTGCAGACAGCCTCGCTCAAGAACAGCAACagtacaataacaactacaacagcaatcacaacaagcaacaacaacaattacatcaACAATAACAGCGTCATCAGCGTCAGTCACAGTCAGACGAGCAACACTGGCaccagcaataataacaacatcaacaacaatagtagCAATGGCAGCAACAGTAGCCAAGCGGCCAGCAGCACCAGTCCCACCAGCACATCCATCGGccgaagcaacagcaacagcaacagcagcggcaacaaaatCACAATAAGCCGCCGCAATCAGACGGCGCTCATTAAGGACAACGGCAAAGTCGCCGTGCAAACGGTCTCCACGTCAACGAACACCACCAACAAGACGACCAGCAGCTACGTGAAGAACTGCCTCATACgcagcagcagttgcagcagcaccagcaaccTCGCCTCGCTGGCGCAAATAAtgagcaacagcagcaccagcagctcCGCATCGCTACTCAACAGCAGCacgaacagcaacagcaactgcagcagcaacagcaactttaGCTCGAGCAGCAACGACAGCACAATCAGCCTAACCagttacagcaacaacaccagcggAAACCATAAAAACGGCAGCAAACATGGCGCAAACGGCAGCGCGACGCTAAAGAAAAGTCGACCCAAACTCTCATCGCCAACACGCCACGGGCCGCAGCAGTGTCAGATTTGCAGCAAGATCTTTGGAAATGCATCGGCGCTGGCCAAGCACAAACTGACACATAGCGACGAGCGGAAGTACGTCTGTGCAATGTGCTCCAAGGCGTTCAAGCGACAAGATCACTTGAATGGTCACATGATGACACACCGCAACAAGAAGCCCTACGAGTGCAAAGCCGAGGGCTGTGGCAAGTCGTACTGCGATGCGCGCTCGCTGCGCCGCCACACCGAGAATCACCATTCGGGCATCATAGCACCACAGAACCAGACACTCTCGCCAACAGCGGGCACGCCCACCGGACTCAGCTTGTCGCCGGCGACAGCGAGCGGTGATGCCAGCTCGCCGGACGGCGCCACCTGCATACGCACCTACATCTCCACGGGCGGCACAGTAGTGGACGCTGCCACGGGCGTCACCTTGACCGAGGAGCAAATAAAGGCAATTAACTTGCCCATCAAGACTGGCGTTACGCTGCTCTCACCCACATCGTCATCGTCCGCCTCATCCGTTGGCGGCACATCGATACCGGCCACATCGCCCACAATTTCACTCACCGAAACGAATCTGGTGGAGGGCGGCGAGGGCTTGACGCGCGAACAACTTGACCTGATTAGCAAAATTATGCAGCAAACCAAGCAGACTAGCGCGCAGGTGACGGTCTCCTCTCCGACCAGCGTCAATTCGTACAAGGTGGACACGGGCGCGGCGACATCGTCCGCCAGCACGTCGCAGAATATGGCAAACGGTTTGCAGAGCAGGCCGCGCACTTGGAATATGCAACTGCTGAACACCACGCAGAATGTTTCCATAACGGTGGATGAGGCGACCTCAGACGCCTCGTCGAGCACGGCAGCATCACCCATCGATACCAAAGACGACGATCTCAGCCAGCAGTTTGCGGCCGCCATCAATCCGCACCTATTGAACATAGTCAAGATCGATCAGAAACCGGTCGAGTGCAATTTGTGTCACCGCAAGTTCAAAAACATACCCGCCCTCAATGGGCACATGCGCTTGCACGGTGGCTACTTCAAGAAGGACCCCGAGGCGAAGAAGGCCGAAAAGAAGGAGTCGAGCGGGCCGCCATTGCAGACTGCGAGCATTGGCGTGCGGGCTCTAATCGAAGAGAAGATCATCAGCAAACGCAGCAAAGACCTAAATAAGGGTGCCTTCGTAGTTCCTGCACCACCCGGAAGCGTAGCCAACACTACGACCATTAGACGATCGATTAGCGATCTAGAGAACTTTCTCAGTCCCAAATCCCAGAACGGCGGCAATGGTAGcatcaccagcagcagcagcggcaacaacaccaCTGCTGTTGGCGCTGCTCAGACAACCACACTGCTACCTGCCGCAACAACCATAAAGAGCGGCGTGGGCGGCGGCGGTAATGGCAGCGGCTTGAGCATACAGCAAATTGGTCTACCGCAGAGCATCGAAATATTCAGCACGAAACAGCAAAAGACAGTCAACAGCGTCAGCCTGAATGTGGGCATGGGCATCGGCGGCGCGCTGACCGCAAATTCAACGATATCTCCGTCAACGATGAAAACGATAGCAACGACAAACACAACGACAACCAAGAGCACATCAACCGATCCAAAGGACTCTACGCTAATTGAGCTACTGAAGCGTGGCACCCGCATCGCCGTTACTGCCAAAAAGCCACCGAATAGTACaaacagcatcagcaacaacaacaacattcaaagCGGCGGCATGACATCCCTAATTTCATCGCGTCAAATAATCACCAACAACAATCGGACCGTGATCATACCGTCGGATGTGCAAGTCCTGTCGAGCAAGGTGTCCAAGTGCAGCACAAGCACCTCGCGTGCCGCCACGCCGGCCAGCATTGCGATCACCGACACCACGCCGCTGTCGCTCACCATCGCGCAGAGTAGCGACGGCAGTAGCACCGGTGACGTGTACACGGTCACCTACAGCAGCGACACGGCCGGCCTCTTCGACGACGCCGAGGTGTACAACGTCACCGATACGGACATGCTGCTGCAGACCGTCGACTCAATGCAGCTGCTCAACGACGCGTCCGAGCAGCTGAAAAGCGAACATTCCGAACAACAATTCTCCGCAGTTAccgacagcaacggcaacagctgCATTCAAGCCGAAATCATCAAACTCGAAACCGATCCCAACGGCCAGCACCTGGCCGGCCAAATCATTAGCACGACTTCGCAAGCGGTAGGCTCCAGTTCAATGTCCACCCAGAGTTTGCCCACTTTCCAACAATTTCATTCCAAAGAGATCATCATGCAGAACAGCTCGCAAGTGCAGGCGGTGACGTGCATGCGCTCCAACGCGCTGACTCTGCCCACAGAACTGAAGCACCAACTGGGTGCCATGAGCTCGCCCATGAACTCGCCGCTGGCCTATCCCACGCCGCCAtccagccacgagaatgttacGCAGTCCTCGCCATATGTCGAGGACGGCCATCAGTATGCAGAGACGACGAATGCCTTCTTCAGCGACAAGTGCAACGCGAACTTCCTGACTCAAGGCGGCGAGATGACCTTCTTCAAGGCCACCACCATCAACAACACGCAACATGAACTCTCCGAGAACGAGAAAATACTGAAGTTGAAAAATGTGCTGGAGGAGACTGCTTTCGATTCGTCCATTAAAGTCGAGGATCTATTGAACGGCACAACGGACGATACGGAGTGCGATCTGCGCGAATTTGCCGAAACGAATCTGTCCTTTCTGGACGAGGATCAGGAGTTTCTGAACGACTCGCGCAACGCCACTTCACCGTTGCCTGAGTCGTTCTTCACCAGCGGCATCGGCTCGGCGGAGGAGGTGAAGGAGGTGCTGCGCGAGGTGCTGCCCGAGGAGAATATGACGCTGAATTGCGAAGAGCAGGGCGAAAACATTATCGACCTGTACTACTTGCCCGGCCTGGGACTGCAGTCGCAGATGATGCCAAACTCCGAGGATCCACTGCTGTCGTCATCGCCACGCGACTTCGGGCAACAGCGCGGTCAGCAGCAACTGTTGCAAACAACGCAGCCGGTTCAACAGTTGTCGCAGCagatgcagcaacaacaacagcagcacaccACTCAGCAGCTATTGTATACGCAGCAGCTgggacagcagcagcagcagcagctggaggagcagcagcagcagcagcacgaacagcagcagcaacaacacgagctgctgcagcagcaacaacagcaaaccgCAGACAACTACGCGGCCAACGAGATCGTGGCGTCGCTGCAGACAATTGGCAACGCCGTAACCACCACCAACCCTACCGCACCACTGCACTACAACGTACAAAATCTACCGCAAGTACAAACCCAACCACAGTTTATTGAAACCACAACAATCCAGCACATGCACAGCCTGGACGCTGCCATGCTGCAACAACCCATCATCTACACCGGGTCCACCGACAAGGAAGAAATCCACATAGCCGCACAGCAAGCCGGTTGCATCAGCCTAATGCCCACCGGTAacgacaataacagcaacacgcTCACGGTGCGGACCATCAGCGAGGCCCTCACCGCCGACACGAACATCTACTTCACCAGCAATTCCAGCGCAGCGACGTCCCTCATGCCAGCCAACAATTCCAATTCCAACGCGAACGCATTAGCCGGCAGCAGTCGGGGCGGCACGACGGCTGCTGGCGCGGTAACGCTGCCACCGATGCCCGCGACCGTTATCTCCTCACTCCAGCCCCTCTCGAACCAAACGAATTCCATCCTGAAGCGACGGCTGCGCGCACACAATTCCAATGATTCTAGCAGTGCACACAATTATTCCAAGTACCACGCCCTCTCACCGTACCGCTCCAAGCTGCGCAAGCCGTCGCGCACGCACTACACGCCGGCGCCCATACTGAACCCCGACCGCAAGGGCGTTGGGCTCTACTGCAACGTGCGCAAGCAGCTCGGCACTGGGCTGATAACGTTTGACGCGTTCGACGACGACGACTTTGACGATCCGGTGGGCTTGGTGGACTGGTCGGACGAGTCGAAGGTAAACTTGGGTTCGACCTATCAAGCACAAATTCCGCCGTGCCGGCAACGCATCGGTACAGGCACGAACGCCCAGGTCGACGCCGACGGCAATGCGCCGGGTGACGCTTGCGACAgcaacatgaacaacaacagcgacagctgcaacagcagcagtaacGCGGATATCAAGTTCGAAGAGGTCGAGGAGACGGTGGGCGCCGATCAGATGTGGGATCCCAACGTGCAGACAGACGAGAAGATTCTGATGCGCTACATTGATCTGAGCAAATCGTCGGCGGTGCCGTTGGGCAGTCACTCGGAAGAGGTGGCTCTGCAGACGCTGCTGAAGGCTGAAGGCAACACGGCGGCGGCGGTGCTCACGTTGCTGCAGACGCAATCGAATGCATTCCAGATGAAGTGGACCGCCTACGAGCTGGAGATGTTCCTCAAGGGGCTGGAGAAGTACGGCAAAGACTTCAGTCGCATTGCTTCAGAGTTGGGCACGAAAACGACGGGCGAGTGTGTGCAAATGTATTACTTCTGGAAGAAACTGTGCGTGGACTACAAGGTGTCGCATCTGAAGGCTGAAACGGTGACTGTCATACAGGCAAACGAGCTGAAGCCGTATGTGTGTGAGGTGCCCGACTGCTCAGCGAGCTTCACCTCAAAAGCCGCTCTGCATGGCCACACCCGCATACACACGTACGGCAGAAATGCCAACAATCACCATCATCCAACAGCCACAGCGAACGCCCCAGCCAGCACCGCCACCTCCTCCACTGCGTACGCAACCACAACCGCATCCGCATCCGCCTCCTCCAGCAGCGCATGCGCCGCCCATTCGCAAACGTGTCACACCGCTAACGCGCACCAAAAAGActcgagcagcagcagcgtcgccgccgccgccgccgccaccgccgctgcAGCCAACAAGGACATCGATTATCCGTGCAAGGTGTGCGGCAAAGTTTTCAATAAGGTGAAGAGTCGCAGCGCGCATATGAAGACACATCGTGTGCAGGAAGCGGTCGACAccaccaacaaccacaaccacaaccaaaTCCAAAATCAAAGTCAAACTCAAAATCCCAGCCACTCCCACAGCCAACAACAGAATCAGACTCAAAGTCAACAACAAAGCCACAATCAAGCACAGtcgacgcagcagcagcagtcaatACAACAGACGGCGTAG
Protein Sequence
MCSASVGTEGSVTLQLRDANSSDSNQSSAPTSLENALTIGYPDPEMLADVLGTLQTASLKNSNSTITTTTAITTSNNNNYINNNSVISVSHSQTSNTGTSNNNNINNNSSNGSNSSQAASSTSPTSTSIGRSNSNSNSSGNKITISRRNQTALIKDNGKVAVQTVSTSTNTTNKTTSSYVKNCLIRSSSCSSTSNLASLAQIMSNSSTSSSASLLNSSTNSNSNCSSNSNFSSSSNDSTISLTSYSNNTSGNHKNGSKHGANGSATLKKSRPKLSSPTRHGPQQCQICSKIFGNASALAKHKLTHSDERKYVCAMCSKAFKRQDHLNGHMMTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSGIIAPQNQTLSPTAGTPTGLSLSPATASGDASSPDGATCIRTYISTGGTVVDAATGVTLTEEQIKAINLPIKTGVTLLSPTSSSSASSVGGTSIPATSPTISLTETNLVEGGEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVNSYKVDTGAATSSASTSQNMANGLQSRPRTWNMQLLNTTQNVSITVDEATSDASSSTAASPIDTKDDDLSQQFAAAINPHLLNIVKIDQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDPEAKKAEKKESSGPPLQTASIGVRALIEEKIISKRSKDLNKGAFVVPAPPGSVANTTTIRRSISDLENFLSPKSQNGGNGSITSSSSGNNTTAVGAAQTTTLLPAATTIKSGVGGGGNGSGLSIQQIGLPQSIEIFSTKQQKTVNSVSLNVGMGIGGALTANSTISPSTMKTIATTNTTTTKSTSTDPKDSTLIELLKRGTRIAVTAKKPPNSTNSISNNNNIQSGGMTSLISSRQIITNNNRTVIIPSDVQVLSSKVSKCSTSTSRAATPASIAITDTTPLSLTIAQSSDGSSTGDVYTVTYSSDTAGLFDDAEVYNVTDTDMLLQTVDSMQLLNDASEQLKSEHSEQQFSAVTDSNGNSCIQAEIIKLETDPNGQHLAGQIISTTSQAVGSSSMSTQSLPTFQQFHSKEIIMQNSSQVQAVTCMRSNALTLPTELKHQLGAMSSPMNSPLAYPTPPSSHENVTQSSPYVEDGHQYAETTNAFFSDKCNANFLTQGGEMTFFKATTINNTQHELSENEKILKLKNVLEETAFDSSIKVEDLLNGTTDDTECDLREFAETNLSFLDEDQEFLNDSRNATSPLPESFFTSGIGSAEEVKEVLREVLPEENMTLNCEEQGENIIDLYYLPGLGLQSQMMPNSEDPLLSSSPRDFGQQRGQQQLLQTTQPVQQLSQQMQQQQQQHTTQQLLYTQQLGQQQQQQLEEQQQQQHEQQQQQHELLQQQQQQTADNYAANEIVASLQTIGNAVTTTNPTAPLHYNVQNLPQVQTQPQFIETTTIQHMHSLDAAMLQQPIIYTGSTDKEEIHIAAQQAGCISLMPTGNDNNSNTLTVRTISEALTADTNIYFTSNSSAATSLMPANNSNSNANALAGSSRGGTTAAGAVTLPPMPATVISSLQPLSNQTNSILKRRLRAHNSNDSSSAHNYSKYHALSPYRSKLRKPSRTHYTPAPILNPDRKGVGLYCNVRKQLGTGLITFDAFDDDDFDDPVGLVDWSDESKVNLGSTYQAQIPPCRQRIGTGTNAQVDADGNAPGDACDSNMNNNSDSCNSSSNADIKFEEVEETVGADQMWDPNVQTDEKILMRYIDLSKSSAVPLGSHSEEVALQTLLKAEGNTAAAVLTLLQTQSNAFQMKWTAYELEMFLKGLEKYGKDFSRIASELGTKTTGECVQMYYFWKKLCVDYKVSHLKAETVTVIQANELKPYVCEVPDCSASFTSKAALHGHTRIHTYGRNANNHHHPTATANAPASTATSSTAYATTTASASASSSSACAAHSQTCHTANAHQKDSSSSSVAAAAAATAAAANKDIDYPCKVCGKVFNKVKSRSAHMKTHRVQEAVDTTNNHNHNQIQNQSQTQNPSHSHSQQQNQTQSQQQSHNQAQSTQQQQSIQQTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00979601;
90% Identity
iTF_00979601;
80% Identity
iTF_00979601;