Mcra015181.1
Basic Information
- Insect
- Melieria crassipennis
- Gene Symbol
- bab2
- Assembly
- GCA_963668005.1
- Location
- OY764962.1:96711781-96713383[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-17 3.3e-14 52.9 0.1 2 44 342 384 341 385 0.95 2 3 0.0033 7.7 6.9 0.0 23 37 410 424 394 430 0.84 3 3 1.2e-17 2.7e-14 53.2 0.0 3 41 452 490 450 492 0.92
Sequence Information
- Coding Sequence
- ATGAATCACCTGAAGTGGATGGGCCACTCTGCAACCATTTTCGACATACAGCGAAACCTACGCAACGATCCGCAGAGCTGCGAGGTGACGCTAGTGGCTAAAGGTCACTCAGTGCGGGCGCATCGCTTTGTGTTGTCCTCATGCTCAGACCTGCTGCGGAATCTGTTGGTGGATGTCCCGATGGGACAGGAGGCCACCATTGTGGTGCCCGACATCAGGGGATCGTTACTGGAGGCGGTGCTGGCGTTTATCTACATGGGCGAAACAAGTCTGACATCAACCAATCTTTCCGAGTTTCTGGAGGCCATCAACACGCTGGGCATAAAGTCGGCAATCAGCTTTGAGTGCAACAATGCGGCTCTAGCCAGTGCGGTAGTTGCTACGAGCGCGGAGCCCGTGAAGACATTAACTGGCATACAAATTGCACAGGAGGAGCTTATGGTGGAACAGGAGAATATTGAGGTAGAAAAATTAGAGGCACAAAACGTGATTACAGAACAGCAGGCAACTACGACACGCGAACTGGAATTCCTCGATGTCTACAGCGATCCGCAGCCCAAAATCACCTACTCCATTGAGCACTTGCCTGGCACCAATATGGCTAACGAATTTATACTGACTGAGAATTCTGGCACGTTTACGCTAACGCAAAATGCAAAACTGGAATCCAACTCAGACTCAGAGAAGATGGGTGAACTGGAAGAAGACACCGAAGACGGCCAAATAATCGAGGAGTATAGCAACAACGGCGATCCCATGGTGGAGATTGTAGAAAATAGTGCCACCACCAGTGTTCCCATCACATCGTCTGCCGCCACCTCCTCCGCAAGTGTTGCTTCCGGTCCGACACAGCCAGTCATACAGattaaacagaaaatcaaaGCCATAAAACTAAAAACGGCATCAACGACCAGCCAACCCAGCGAACCGATGCAAAAGTCAATGGAACTAAAATTAGAAGACGCCGCTGATCCCATTGCTGTGCTAAAATCTAACTACAGTAGCTACGACAGTCAGTGCCAGGACACTGCGCTCTCGCTGGCCGTGCAGGCAGTACTGAACGAGGGCATGAGCCTGCAAAAAGCGGCACAGAAGTACGAGATCGCCAAAACAGTGCTGTGGCGGCGTGTGCGCAAACACCCAAATTACATGAAAACGGCGCGTGAAAATCCCGTGCTCACGCTAGCCTACGAGCGCTTGAAAGGCGGCGACTCACTGAAGAATATCAGTCGCGAGCTGGACATCCCGATGTCCACGCTGCATAGACACAAGGTGCGGTTGGCGCAACAGGGTCGCTTGCCAGACTATGTGACCTTCAAGAAGCGCGACATGAACTCGAAAATCGAGCTAAAGGACAAACTAATAAAAGCAGTGCACGCTTGTGTACACGAAGGCATGTCCCAGAATCACGCGGCCAATCTTTTCGACATACCGAAGAGCACGCTGTGGCGTCATCTGCAGAAGCGCATCGCGGAAGCTGAACTCGCGGACTTGAAGCCAGGGGACATCAAGGAAGAAGTCATATTGTCCTAA
- Protein Sequence
- MNHLKWMGHSATIFDIQRNLRNDPQSCEVTLVAKGHSVRAHRFVLSSCSDLLRNLLVDVPMGQEATIVVPDIRGSLLEAVLAFIYMGETSLTSTNLSEFLEAINTLGIKSAISFECNNAALASAVVATSAEPVKTLTGIQIAQEELMVEQENIEVEKLEAQNVITEQQATTTRELEFLDVYSDPQPKITYSIEHLPGTNMANEFILTENSGTFTLTQNAKLESNSDSEKMGELEEDTEDGQIIEEYSNNGDPMVEIVENSATTSVPITSSAATSSASVASGPTQPVIQIKQKIKAIKLKTASTTSQPSEPMQKSMELKLEDAADPIAVLKSNYSSYDSQCQDTALSLAVQAVLNEGMSLQKAAQKYEIAKTVLWRRVRKHPNYMKTARENPVLTLAYERLKGGDSLKNISRELDIPMSTLHRHKVRLAQQGRLPDYVTFKKRDMNSKIELKDKLIKAVHACVHEGMSQNHAANLFDIPKSTLWRHLQKRIAEAELADLKPGDIKEEVILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00979460;
- 90% Identity
- iTF_00979460;
- 80% Identity
- iTF_00979460;