Basic Information

Gene Symbol
kn
Assembly
GCA_963668005.1
Location
OY764963.1:37127286-37134297[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.8e-119 8.1e-115 385.0 0.0 205 385 1 210 1 214 0.99
2 2 1.7e-10 2.4e-06 26.8 14.2 422 512 213 308 210 325 0.70

Sequence Information

Coding Sequence
ATGCGACGTTTCCAGGTTGTTATATCTACCCAAGTTACAGTTGAAGGACCACTATTGGCCATATCCGACAATATGTTTGTTCACAATAACTCCAAGCATGGCCGCAGAGCAAAGCGTCTGGACACTACGGAAGGTACAGGAAACCCGCCCCTGTCCATTTCGGGCCACCCCCATGCGCCTGATAGCACCTATGATGGTTTATATCCACCGTTACCCGTAGCCACACCGTGTATTAAAGCGATATCTCCCAGCGAAGGTTGGACAACCGGCGGCGCGACAGTAATAATTGTCGGTGACAATTTCTTTGATGGCCTCCAAGTAGTTTTTGGTACAATGTTAGTTTGGAGTGAGCTAATCACGTCGCATGCCATACGGGTTCAAACGCCGCCAAGGCACATACCCGGCGTGGTTGAAGTCACACTTTCATACAAAAGCAAACAGTTTTGTAAAGGATCACCAGGACGCTTTGTCTATGTTTTAGCTCTTAATGAGCCAACCATTGATTACGGATTTCAACGCCTGCAAAAACTTATACCACGACACCCCGGCGATCCTGAAAAACTGCAAAAGGAAATAATTCTTAAACGCGCTGCAGATCTGGTTGAAGCGCTATATTCAATGCCAAGATCACCCGGAGGATCGACGGGATTCAACTCCTACGCCGGTCAATTGGCCGTCAGTGTTCAAGACGGTACTGGCCAATGGACAGAAGATGACTATCAACGGGCCCAATCCAGTAGTGTAAGCCCCCGCGGCGGCTACTGTAGCAGCGCCTCCACCCCACACAGCTCGGGCGGCTCTTACGGTGCAACCGCTGTCACGGCAAACGGATACGCACCCACAACTAACATGGGCGCTCTTTCTTCTTCACCGAGCACTGTTTTTAACTCCACTACAAGCAGTGCCTTTTCGCCATTAATTTCAACAGTGTCGTCACCGTGGCATCAGGCGCTAGTGCAACATCACCACACGCATCCACACCACTATCACCATCCGCATCAACCGTGGCACAATCCAGCAGCCTCCACTGCAACGGCGGCAGTATAG
Protein Sequence
MRRFQVVISTQVTVEGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNPPLSISGHPHAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVLALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATAVTANGYAPTTNMGALSSSPSTVFNSTTSSAFSPLISTVSSPWHQALVQHHHTHPHHYHHPHQPWHNPAASTATAAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01180945;
90% Identity
iTF_00893648;
80% Identity
-