Basic Information

Gene Symbol
JARID2
Assembly
GCA_963668005.1
Location
OY764962.1:87717791-87726060[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-21 4.9e-18 65.9 0.0 6 89 1859 1940 1854 1940 0.92

Sequence Information

Coding Sequence
ATGGTGGTCTCCAAAGACTCCAAGCGAAAACGCAAAGAGTCACCGCCACCACAACCGTCGGCGGTGGAGTCTTCGCCAGAAATGCCAAAAAGAACAAAAGTTCAGGCTCAACGTAAATTCGCACAAGGTCAAAGTGCGCCTACGTCATCATATAATTCGATAACCGCCGCCTCGTCGTCGTCAAACACCGGGCCAAGTACATCGTCAGAGAGTCGCGAACCGCCAACTGAAATATTGCCGAACAAACGGCCTAGGACTGAGGATTTTCTAACGTTTTTATGTTTTCGCGGCACACCAGCGCTACCAGCACACTTGGACTTCCTGAACCAGGGCAAAGGAAAAGAGCCCGATACAGCAACTAagaaaaatgttacaaaatcGGCAAGGGCGCCAAAAAAAGGGAAGAAGGGACGGCCCAAGGCGGCTGCCAAAACTGAAGAGCCCAAAGCATCCACATCGACAGCAGTTCCTGCTGCTGTTGAAGTTGCGGATTCTGCCAGTTTAAATAAGAACAATGAGAAAGCCGAATTGCCAACTGGGGATGTAGTGATGCCGGTTTCCATCCGAAAGAAAGCAGAAGTGGTTACTGAAGGCAATCGACGTGGCCGGCCAGTAGTTGACCGGCAGTTGCGCAACGTTGCGGATCCAGAAAAGTGCAATAGCTCGCCAGAAGTAAAGCGGCGCTCCAATAGGAGCACTGCAAAGGACACAAAACAGCTCGTGCAGGCCGATACCGACGAAGAGGAATATTTCTCTGCCAATGACGAGACTGGAAAGGCGGCTGACTCTGACAAGGAAGCTGTAGCAAAAAATCATCCCAGAAAATGTAAAACTCCAATACTACCGGACCGGAAGTCGGAGACACCTTCTAAAGAAAGCGAAACGGGTAAATCGCGTAGAGGTAGACCTGCGTCTGCTACGAAAAAGGGAAAAGACGTTCTAAAGGAGAATTCGACTGATGACAACGCCAATAAAGCAAAGGGGCTCGCAAAGTCTACTCAGAAACCAGAAACGCCGGCACCAACGCAAGCGCAGTCATCTGTTAAAGAAAAGGCCCCTGTGAAACGACCCAGACAAAAAGAATCACCTATATTTATTCCCTCGCCAGAGCCGTCTGGGCGCATGACAAGACAGCGGGCATTTTTTGAGCCAGTGAAAGTACCACATCGCGAAGAAGAACAGGATGAAGAAGAGACAAATGATTATCCAAAAGAAAAGTGTTCCGAAAGAAGCGATAAAAAGGCTTCGATAGATTTGATGAGCACCGAAGATGTTTCAAAAATGACtggaaaacaaatcaaaaaggATAATGGTGGTCGAAATGCTGAAATTGACAAGGAAAAATCGAATTTGAATGTGTTTGATTTTTCATCGGATGACGAGCAACCCCTGGCAAAGAcgataaaaatgaaaaaggggGCTAAAAACAGCACCAAAAAATGCGCATCTCGCTCTAATAAAACTAACAGAAAGCCATCGCCTAAGAAAACACCTGATTGCAAACCTAAAGTGGAGGAAGTCGTAGAGGTGAAGCATGAAGAACCAGACAAAATTGAGGATAAAGGAATAGATTCAGACAGGGATCTCAAGGAAGAGCAACAGGAAGATACGAATAAGAGCAAAAACAAACGCGGAAAAAATCTTCGTAAAAAAATTGACGACACCGTGGATGAAGACAGAGACCTGGCACCTCCATCGCCAAAAAAGAGTTCGAACGCGCGGCAATCTCGAAAGAAAAACAGACCCGACAATCTGACAGTCAACGGGGAGGAGGAAAAAGACTCTTCTCCAAGTGCGCCGATCAGGAATCAACGTCCAACGCGAAAAACTAAAGAAGCAGCGGCTATTTACATGGGAATAATCGGTCACAAGCTGCAACTTGCTGATGACGAAGACGATGATATGTCACTGAATAGTTTTCCTGACAGGCCGAACGTAAAGGAAATGGAGAAAATGGAGATTGAGCTGAAAAGGAATGCAGGACATGTGGGTACAGGTGCAAAAGCAGTAAATTCTGCACCAGCTGCACCAAAAATACCGCCAAAGCTGACGGCCACAGAATCACCCATAACTGTGGAGAAGCCAACAGTAGGCCGCCGAGGCCGCCCGCCGAAACAACAGAAGCAGCCGCCGGTCAAACGCGAAATCGAAGGAATGTTGGTAAAGAAGGGAGCAATCACAAAAATAGCGCCACCTGTTGAAAGTGCGCATAACAAGGATAAATCGGATCTCAGCAAAGCTGAGACAGACGATGAGGACTTTCTGCTGAACGAGGAAGTCAATGAGACAAAGCGAAAACTCGAAAAAAGTTTTAGTGATTCGGACGACGAGCCCTTAGCTATTAAGGCCAATGTTAAGCCCAATGAAAAGGAAACTGAGCAAGATGTGAAGAAATGTGAGAATGTGATGCACAACTCAATAACTGCACCTCAACTGATGATATTGCCGCTGACCGCGAAACCAGTTCCTACTCCTCCGCAGAACTCATCACAAGCTGCTAATGCATCACCAGTCACGGCACCAGCACAGAATGCGACATCACAAGTACCGAGTCCGTTCAAAACTATCGAAAAGAAATCTCCGGTTCCCACATCAAAAATACTTAACGTTCCTGCAACGTATGCAATGCCGTCTGCGAATGCCGCGGCCGCCAATGTGAATGCGGCTCTTAATACGAGCTTCAACAAAACGTCACCGTACTTACCACAAGCTTCGCCGCTGTACCATGCACCACATGTGCGCCCAATGGCTCATCAATTTCCCTCTGCAAAATCGCCCACCGGTCCACCTGGTTTGCCAGTTGGGCCGTCGGTGGGATCGCATCTGACAACGCCACTTCCTCCACAATCTCCATTAAAGTACCAGGCAGCGCCGACTACATATCCACCTCCTATTGAGGCGTATCCATCGCCGAAAATAAACCCAAATTTCTTGACCCCGAAGTTCGACAGAACATCACTACCGCGCTCCAACAATTTCCCATCACCATCCCCAGTGAAGTTTGATGTGTCATCAACGGTGTCGAAAGCGGGGCTGGTAACAAGCTCAACGATGAGTGCAAAGACTACAACCGTTGGCGGTGGCGCACTGACTGTATCAATAGCGGCGACCACCACAGCGTCGACGTCTGCAGCAGCGGCTGCAGCAGGCACAGTTAATAATGATCCGCTGAAAGACGAAATTGGTAGCATCCTAGCGGCCAATCTAATGCCAAGCAAGGAGGAATCTGGCAAGATTTTCGGCATTGCCAGTGTGAGTCTGGCACAAAGCTCTGGACCAGACAACACAAAATGCACCCTAGGCAAGTGTGGATCGATTCACAAGCCGGTGCTGGGCCCAGTAGTGCCTACAGAGGGTTACATTGGCGATCAGCTGTCCAGCAAGGAACGACGTAAGGCCAAAGTGAATATGACACACGAACAGATACAAAAGTGGCTAATCGAGTGCTCTTCAAACCCGGATGAGATCCAGGATGACTTGGACGACGACTACGATGACAATCTTCGTCCAAATCTGTTCGCTACAACGCCACCACCAACGCGCGATGACAAGGAGAGTACCTCTTTTAGTTCGTCGTCGAAGGCTACACGAGATTTGGGCAAAAGCGAGAGCGCCTGGTCGGCAAAAGGACCTTCATTGAAAGCCACACCTGTTGTTGCCACAGCAAGTAGAAAAGAAGATGGAAAGCAGCCGGACATGAGCAATCAGCCAGATATGGCATCTGAAAATGAGCGCACTAGCGGGCAAGCAATTAATCTCACGCAAAAAGCCGGTGCAAAGCAGACTGCCAACGCCACCAGCGAAGCAAAGGCGTCGCGTTCCGAGAAGTCGGAGAAGAAAGCTGATAAGAAGCTCAAAGAAGATAAATCAACAGCAAAAGAATTCACAAACAAAGACAATAAGCTAAATAAAATCGATAAGGAAAAAGAAGCGCCTACGTTGGCCGGCGGCGGGTCGAAGACAACTGCTACTGGTAAGCAAACGAGTACCAGCACTGGTCAAAGTCAATTGCCCCCAGAGCCAGTAACACCATCAGCATCAACATCAAAGCAAACCCGAAAGAAAAACGTGCCGGCAGTTGCGTTGTTGGAAGAAAAAATATCGACGGCAACTACGTCAAAAACTACAACGACCACAGTACCGAATAGTGGCTTAGCTACCACCAAAACCCCAAAACGCACACCTGTGTACAATCAAAAGGCTCTGCAGAAACAGATCGAACTGAAAGAGACCACAACCACCAGCCACAAGAAGACGACTGCCTTCTCGTACGGCGCGTTTTCTGCTGACAATGAAAAGTCGATCTATTCATTTGACAAGGATGATGATGTGGATGGATCAAAACCACTTGCAAAGCCAGCTTTCCGTCGTCAAAGTCAACGCGATTCCCAGCAAGACGAAGTAGTTCCTCCAACCACACCGACCAGCCGTACGTCGCCGGCAAAGAAGCGTGCCGCAGCTGCAGCCGCTGAAAAGGCAAACAAGGACTTGGCGAATAGCTCTGTGTCGCTGACTCTCAGTCCAGGCGAAAACTGCAAACTCGTGAAGGTGAGTTTGGATGCGGAGAAACCTGCCGTCAGCGGTAAGACGCCCGCTGGGAAGGCGACAAAAGCCACTAAAAAAACCGAGATGGCGGTAAACAATGATGCGGACTCGGATTCCGATGGTCACACATTCTACATTCCACTCCAGGGTAGTGGAGCGGGTGGCGCTGTTGAGGGAGGTATACAAGGTGTTGCTGTTAAGCTCGGCAGGGAGGGACCTGATGGCCCCAATCAGAAAGTAATTATGCACGCCACTCTGGTCACGAAGGCGCAGATGGGCTCAAACTCAAAACCGCTGCCGGACTCCATGAATGTCTCTGACATTGTGAAAACATTGATGACATCGCAGTCGCAAGTGACACCGAATGCAGCGTCGTCGGAAGCGTCGAAGAAAGGCTCAAACTTAAGTGCCACGGTGACGGCGACGGCAAGCACGtctgcggcggcagcagcagcagcagctatgTCGGCAGCAGCCGCGGCCACTGCTACAGTTGTGTCAAATTCAGCTTCGAATAGTCCGAAGAGTGTGCCAGTTGGAACGGTGCAGCCCCGATTTAAAGGCGGCGATCCCACAGCAGCCGGAAGTcaaacaccaacaccagcaacagcagcaggagCGGCAACAAATAGTGGACTGGTTAGAGTAAACTCCAGTTCGTCGCTGCTTTCAGGCTCGGCGAAGTCGCGCATTTGTGCGCCCGTTCCGGGACCTTCGGCGCATGCTATAAACAAGAAATTTAAGGACGACACCCCAATCAAAATGTCAAACAACACCGCTTTTCCACGGCACGACGATCCCACTCAGATGGTCGACGCACCCATTTTCCGGCCGACAGAGAAAGAGTTCGCCGATCCCATAGACTTCATCGAACGCATTACCCCGATTGCGGCGCGTTTCGGAATATGCAAGATTATTCCGCCGTCGACTTTTAAACCAGAGTGTCGCATTTCGGACGAGATGCGATTCACAGCTTACAACCAGTATGTGCATAAGATGTTGCACCGTTGGGGCCCCAGCGCCAAGGAGCTGAGTGCGATTAAAAAGTATCTGGCCACGCAGAGTATTGTGATGAACCACCAGCCTTGGATTGGCGGCATGGAGGTGGACCTACCGCGATTGTATCACACCGTTCAGGAGCTGGGCGGGCTGAAGGAGGTTATTGAGAAGAAGAAGTGGGCGCGGGTGGCTGAGGAGATGTGCATTCCGAAGTTGGCGCAGGATCGCGTAGCGAAACTGGACGACatatattgtaaatatttgctgCCCTACGACACCCTGTCGCCTGCCGAGCGCCAGAAGTTGTTCGACGAGGTCGAGGCCGACTGGGCGAAGCGGGAAGCGCGCGCGCGACGCAATGCCGATCGATTCGTTAACACGGAAAGCGTGTCGAACGAGGAGGACGACGTTTCGTCCGAGGACGATGAGGAGTCGGAGGAGGAGGTGGACGGCGTGTCAATGGAGTGCATTGTGAAGGGGCGCAGTATGGCGCTAAGTCAATTCTACCGCATCGCACGCAACACGATGGCGCTGTGGTTTAAGAACACCGAGCCGACGGTGAATGATGTGGAGGCTGAGTTTTGGCGTCATGTGGCTGTTCGTGACAGCCACGTTTGTGTGCATTCGGGTTCCATTGACTCATCCGGCTGGGGCTACGGTTTTCCCAGTCCTGGGCCGAAAGGCAAGGGATCCAACTACGCCCGCCACCCGTGGAATCTTAAAGTGCTGACGAATAACCCGGGCTCGGTGTTACGCTCTTTGGGTCCCGTAATGGGCGTAACTGTGCCCACGCTGCACGTAGGAATGTTGTTCTCGGCCTGCTGTTGGTACCGCGATCCGCACGGGCTTTCGTGGATCGAGTATCTACACACAGGTGCCTCGAAGCTTTGGTACGGCATTCCGGATGACCAGAGCGCTAATTTCCGAGCAGCGCTCACTTCACTCATTCCAACGCATTGTCAGAACAAGACGATATGGCTACCATGTGACACGGTGATGGTTCCACCGCACATGCTCACCGATCGCGGTGTGTCCTTGTGCCGCATCGAGCAGAAGCCTGGCGAGTTTATTGTGGTGTTCCCCCGCGCCTACACTTCGAGCCTGGCCACTGGCTACGTGGTGTCGGAGAGTGTGTATTTCGCGACGTCCTCTTGGTTAGACTCGGCGAAGGATGATTTCAGGGATATCCATGACAGCTGCGAGCCGGCTATGTTCTCGCTGGAGCAATTACTTTTCGCCTTGGGCTATGATCAGCGAGTCTCGCCCGATACTCTGCAGCAAATGCTGCCAATGTTGCACGAAGTATTTGAGAAAGAAACTGCTGCTCGGGAACAACTCAAGgctgctggtgttACTTCGACGGAGAAGATTCACAATGAGAAGGGCTCGAAGGCGAAGAAGCAGCAGCCCCCATTCAAGTCGATCGAGAGCGAGTGCGATCTGTGCCGGGCAAATTTGTACATTTCCATGGTGAAGACCGAGGAAGGAAACGTTTATTGTTTGCAGCACGCGTTGAAGAACCTGAACAACGGAAACATTCAGGCTAAGCAGTGCAAACTAATATACGCCTACAACGTTGAAGATATCGAGAACCTCATTAAAAATCTCAAAGATAAGATACATCAGAAGCGAAGTGCTGTGGGCAGCAAGAAAGCGAAGTAG
Protein Sequence
MVVSKDSKRKRKESPPPQPSAVESSPEMPKRTKVQAQRKFAQGQSAPTSSYNSITAASSSSNTGPSTSSESREPPTEILPNKRPRTEDFLTFLCFRGTPALPAHLDFLNQGKGKEPDTATKKNVTKSARAPKKGKKGRPKAAAKTEEPKASTSTAVPAAVEVADSASLNKNNEKAELPTGDVVMPVSIRKKAEVVTEGNRRGRPVVDRQLRNVADPEKCNSSPEVKRRSNRSTAKDTKQLVQADTDEEEYFSANDETGKAADSDKEAVAKNHPRKCKTPILPDRKSETPSKESETGKSRRGRPASATKKGKDVLKENSTDDNANKAKGLAKSTQKPETPAPTQAQSSVKEKAPVKRPRQKESPIFIPSPEPSGRMTRQRAFFEPVKVPHREEEQDEEETNDYPKEKCSERSDKKASIDLMSTEDVSKMTGKQIKKDNGGRNAEIDKEKSNLNVFDFSSDDEQPLAKTIKMKKGAKNSTKKCASRSNKTNRKPSPKKTPDCKPKVEEVVEVKHEEPDKIEDKGIDSDRDLKEEQQEDTNKSKNKRGKNLRKKIDDTVDEDRDLAPPSPKKSSNARQSRKKNRPDNLTVNGEEEKDSSPSAPIRNQRPTRKTKEAAAIYMGIIGHKLQLADDEDDDMSLNSFPDRPNVKEMEKMEIELKRNAGHVGTGAKAVNSAPAAPKIPPKLTATESPITVEKPTVGRRGRPPKQQKQPPVKREIEGMLVKKGAITKIAPPVESAHNKDKSDLSKAETDDEDFLLNEEVNETKRKLEKSFSDSDDEPLAIKANVKPNEKETEQDVKKCENVMHNSITAPQLMILPLTAKPVPTPPQNSSQAANASPVTAPAQNATSQVPSPFKTIEKKSPVPTSKILNVPATYAMPSANAAAANVNAALNTSFNKTSPYLPQASPLYHAPHVRPMAHQFPSAKSPTGPPGLPVGPSVGSHLTTPLPPQSPLKYQAAPTTYPPPIEAYPSPKINPNFLTPKFDRTSLPRSNNFPSPSPVKFDVSSTVSKAGLVTSSTMSAKTTTVGGGALTVSIAATTTASTSAAAAAAGTVNNDPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEGYIGDQLSSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDYDDNLRPNLFATTPPPTRDDKESTSFSSSSKATRDLGKSESAWSAKGPSLKATPVVATASRKEDGKQPDMSNQPDMASENERTSGQAINLTQKAGAKQTANATSEAKASRSEKSEKKADKKLKEDKSTAKEFTNKDNKLNKIDKEKEAPTLAGGGSKTTATGKQTSTSTGQSQLPPEPVTPSASTSKQTRKKNVPAVALLEEKISTATTSKTTTTTVPNSGLATTKTPKRTPVYNQKALQKQIELKETTTTSHKKTTAFSYGAFSADNEKSIYSFDKDDDVDGSKPLAKPAFRRQSQRDSQQDEVVPPTTPTSRTSPAKKRAAAAAAEKANKDLANSSVSLTLSPGENCKLVKVSLDAEKPAVSGKTPAGKATKATKKTEMAVNNDADSDSDGHTFYIPLQGSGAGGAVEGGIQGVAVKLGREGPDGPNQKVIMHATLVTKAQMGSNSKPLPDSMNVSDIVKTLMTSQSQVTPNAASSEASKKGSNLSATVTATASTSAAAAAAAAMSAAAAATATVVSNSASNSPKSVPVGTVQPRFKGGDPTAAGSQTPTPATAAGAATNSGLVRVNSSSSLLSGSAKSRICAPVPGPSAHAINKKFKDDTPIKMSNNTAFPRHDDPTQMVDAPIFRPTEKEFADPIDFIERITPIAARFGICKIIPPSTFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHQPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVAKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDVSSEDDEESEEEVDGVSMECIVKGRSMALSQFYRIARNTMALWFKNTEPTVNDVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNPGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATSSWLDSAKDDFRDIHDSCEPAMFSLEQLLFALGYDQRVSPDTLQQMLPMLHEVFEKETAAREQLKAAGVTSTEKIHNEKGSKAKKQQPPFKSIESECDLCRANLYISMVKTEEGNVYCLQHALKNLNNGNIQAKQCKLIYAYNVEDIENLIKNLKDKIHQKRSAVGSKKAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-