Basic Information

Gene Symbol
grh
Assembly
GCA_963668005.1
Location
OY764963.1:114644925-114715388[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-54 1.4e-50 172.3 0.2 24 204 782 957 769 960 0.93

Sequence Information

Coding Sequence
ATGTCATCATCCCCCGCGACCACCAGTGTCATCACATCAAACGAACTTGCTTTGCCACAAACGCACGCTGCGGCTATGCACCGCATCACCGCTGTCTCGCAGAACGAGTCCACCTTATCCGCTTCTCCGCCACAAAGCGTTTCTGCATCCGCAACAAGCACCAGCGCTGGCAATATTGCCGCCACCATTACCACAACTGCATCGGCCGGAGTTTCTTCCGCCGTCAGCAACGGCCTGCCTCAGATTTCCCCCACCAACGCCATGCACCGATCGCCGGACAGTCCCCAGCCAGAGTTAGCCACCATGACGAACGTCAACGTGCTGGACCTTCATACCGATTCGTCCAAATTATATGACAAAGACGCTGTTTTCATCTACGAAAGTCCCAAGGTGGTAGTGCCGAACGTTGGAACGGCCGAGTCAGATGAGCAGATCATCGATGCGCGGATGGTCGCGCAACTGAATCAGCAACAAGCCgcggtggctgctgctgctgcggaaAACCAACCTCTGGCCAAGATCGAGTTCGACGAGAATCAAATAATACGAGTGGTCGGGCCAAATGGCGAACAGCAGCAGATCATATCGCGTGAGATTATTAATGGCGAGCACCACATTTTATCGCGCAATGAGGCCGGTGAGCACATATTGACGCGCATCGTCAGCGACCCAGCAAAACTGATGCCTAGCGACAACGCCGTAGCGACGGCCATGTTCAACCAGGCGCAGAAGTTAGCCAACGATCACGCGGTCTATCAGACATCACCGCTGGACGCCACTATGTTACAGCACTATGACTCCGAGGGCGTGGTCAAGACCGAGGTAGACATCTATGACGACCAGAAAAAGCCAACCATTGCCCAAAGCGGGCAGATCATCTACACTACTTCGGGCCCAGAAGCTAATAAACATTTACCGCTCTTGCCAGTACCTGCGAAGCTCGACGCAGATATATATCCAAATGACAAACACATTGACCTGATTTATAACGACGGCAATAAGACCGTTATTTACACGACCACCACCGACCAGAAGGGCCTCGAGATCTACTCGGGCGGTGACCTAAGTGGTTTGGTTGCTGATGGGCAGGTGGTGGTGCAAGGAGGCCTTCAGTATGCCGGAACAGGGGCGACAACTGGACAGCCGGTATACATAGTTGCCGACGGAACCATGCCCCCCGGCGTCGATGGACATTTGCACAGCACACCAACTGCGGGCAATAACAAACTGAACGGCCAGACCACACCCCTTGACGTGCCTGGCTTGTCGCAGAATGAGTTCCAAGGTCTGTTGCTCGGTTCCCACCCATCGGCGACAGCAACGACGACCGCCGTGCCAACGACGACGCCTATTTCGCAGCAGTCCGCCATTGTGGCTACCGGAGCAGCGACTACCGCGGTATTGGTCACCGCCGAccagcagcgccagcagcaaCAGACGATCAGCATCAAGCGCGAGCCGGAGGATCTACGGAAGGACCCCAAAAACAGCGCCGTGAGTCTGAATGCCTCGGGCACCACCAACGGCAACCACCACGGACAGAAGGTGTTAGTAGTGCAGTCGCCATCGCCCACGCAAATACAAATCAAAGAGCCTCCGACCAGTCCTGGAAGTCCAGCCACAGAGACAATGTATGCTGCCAGCGGTGGCACACAGATTTACCTGCAGGGCGCCCACCAGACCAGTGCAGCCGGCGCCGTTGTCCCCTCGAATGTAAACGTCAACGCGCAAACGCCGAGTCCGGGCCCCTACATCAGCCCCGATAGCTACGGCATGTACACCACTCGTCTGGCTACCGGCCCCACATCCACTTTCATCACGGAGCCCTACTACCGCGAATTCTACGCCGCTGCCGATGGCCAGGGAAGCTATGCGCAAGCGCCACGCACCGCCCTCTACGGCGGCGTCAGTGAGAGCGACGCGCCGCAACCGGGCGCCACCTACGAAGGCCGCTTCACGACCAGCGTCTCCACCGCTGTGCCCACGCACACTGCCAGCAAAAGTGGCACACCGGTGTACGCGAAGACCGTCACGGCGACCGGCCTGACAGTCGACCTGCCCAGCCCTGACTCCGGCATCGGCGCGGACGCAATTACGCCGCGGGAACAGACCAACATCCAACAGTCCTTCGACTACACAGAACTCTCGGGCACGCTGCTGGACGGCAATGGCGGCATTCCGGTCTCGGTCAACAGCATACAACGCGCCACAGTCAACGTGCACGGTGGCCAAAATAGTCCGACCACATCACTAGGAGGTACCAGCGCCAACGGCGCCACACGTTCGCGACCTTGGCACGATTTTGGGCGCCAGAACGATgcggacaaaattcaaataccaaaaatCTTTTCAAATATCGGCTTTAGATACCACCTCGAAAGTCCAATCAGTTCATCGCAGCGCCGAGAAGATGACCGCATCACATACATAAACAAAGGACAGTTCTATGGGATCACGTTGGAGTACGTGTCGGATCCAGATAAGCCTATCAAGAACACCACTGTCAAGAGTGTCATCATGTTGATGTTCCGCGAAGAGAAAAGTCCAGAGGATGAAATCAAAGCTTGGCAATTCTGGCATAGTCGGCAGCATTCCGTGAAGCAGCGAATTCTGGACGCAGATACAAAAAATTCGGTGGGCCTAGTTGGCTGCATTGAAGAGGTCTCTCATAATGCCATCGCCATATATTGGAATCCGCTTGAGAGTTCTGCCAAGATCAACATCGCTGTACAGTGTCTGAGCACGGATTTCAGCAGTCAAAAGGGAGTTAAGGGTCTGCCGCTGCATATTCAGATTGACACATTCGAAGATCCCCGCGACGTTCAAGTGTTCCATCGAGGCTACTGTCAAATCAAGGTGTTCTGCGATAAGGTAAGTACTGTTCCCTGCGTATACCTTCTCGCCCTCTTCCTGCTACACTTAAATTCAAGGGCCAATGTTGTAGCCACGGCATTGTCCGCAATCAAGCAGCCACAGGTGAAGTAG
Protein Sequence
MSSSPATTSVITSNELALPQTHAAAMHRITAVSQNESTLSASPPQSVSASATSTSAGNIAATITTTASAGVSSAVSNGLPQISPTNAMHRSPDSPQPELATMTNVNVLDLHTDSSKLYDKDAVFIYESPKVVVPNVGTAESDEQIIDARMVAQLNQQQAAVAAAAAENQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPAKLMPSDNAVATAMFNQAQKLANDHAVYQTSPLDATMLQHYDSEGVVKTEVDIYDDQKKPTIAQSGQIIYTTSGPEANKHLPLLPVPAKLDADIYPNDKHIDLIYNDGNKTVIYTTTTDQKGLEIYSGGDLSGLVADGQVVVQGGLQYAGTGATTGQPVYIVADGTMPPGVDGHLHSTPTAGNNKLNGQTTPLDVPGLSQNEFQGLLLGSHPSATATTTAVPTTTPISQQSAIVATGAATTAVLVTADQQRQQQQTISIKREPEDLRKDPKNSAVSLNASGTTNGNHHGQKVLVVQSPSPTQIQIKEPPTSPGSPATETMYAASGGTQIYLQGAHQTSAAGAVVPSNVNVNAQTPSPGPYISPDSYGMYTTRLATGPTSTFITEPYYREFYAAADGQGSYAQAPRTALYGGVSESDAPQPGATYEGRFTTSVSTAVPTHTASKSGTPVYAKTVTATGLTVDLPSPDSGIGADAITPREQTNIQQSFDYTELSGTLLDGNGGIPVSVNSIQRATVNVHGGQNSPTTSLGGTSANGATRSRPWHDFGRQNDADKIQIPKIFSNIGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVSDPDKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAIYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHIQIDTFEDPRDVQVFHRGYCQIKVFCDKVSTVPCVYLLALFLLHLNSRANVVATALSAIKQPQVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-