Basic Information

Insect: Melanotus villosus
Gene Symbol: -
Assembly: GCA_963082815.1
Location: OY720427.1:30146629-30149859[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0013 0.28 14.1 0.1 2 23 87 109 86 109 0.96

2 10 0.019 4.2 10.4 4.6 2 23 197 219 197 219 0.91

3 10 0.68 1.5e+02 5.5 0.4 3 20 471 488 469 492 0.83

4 10 6.9e-05 0.016 18.1 0.6 2 23 557 579 556 579 0.94

5 10 4.2 9.4e+02 3.0 0.7 2 23 604 626 603 626 0.92

6 10 0.014 3.1 10.8 3.6 2 23 672 694 671 694 0.96

7 10 0.2 45 7.2 3.7 3 23 709 730 707 730 0.92

8 10 0.00039 0.088 15.7 0.7 2 23 780 802 780 802 0.95

9 10 0.34 76 6.5 0.9 1 23 876 898 876 898 0.97

10 10 0.00018 0.041 16.8 1.2 2 23 911 933 910 933 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0013	0.28	14.1	0.1	2	23	87	109	86	109	0.96
2	10	0.019	4.2	10.4	4.6	2	23	197	219	197	219	0.91
3	10	0.68	1.5e+02	5.5	0.4	3	20	471	488	469	492	0.83
4	10	6.9e-05	0.016	18.1	0.6	2	23	557	579	556	579	0.94
5	10	4.2	9.4e+02	3.0	0.7	2	23	604	626	603	626	0.92
6	10	0.014	3.1	10.8	3.6	2	23	672	694	671	694	0.96
7	10	0.2	45	7.2	3.7	3	23	709	730	707	730	0.92
8	10	0.00039	0.088	15.7	0.7	2	23	780	802	780	802	0.95
9	10	0.34	76	6.5	0.9	1	23	876	898	876	898	0.97
10	10	0.00018	0.041	16.8	1.2	2	23	911	933	910	933	0.96

Sequence Information

Coding Sequence: ATGACGACATCCGCCACTTTACCTTCCACAACGGGACCGGTACATGCTGGCGGCTTCTCTGCAATTTCCGAGGACACCGCTGCCAGCGAGCCCGCCTTCGAGACGCCGCGACCCATCAAACGCTGCTTGATCGCCCCGCTCACGGATTCCTGCAAAAAGCGCCGGAAACAGGCTACTCCAGTTCGTATCTCTGCTGCTGACTCAGACTTAGTTCCTTCTGAAGGTAAGCTGCCCATTGCATCTCCCGAACCCGACTTGCGGTGTCCCCTGTGCCAACTCGCCTTCAATAAACCCGAGCGACTTCAAAATCACATTGCGACTGAACATGCGAATGTCCAATGCAAAAAGGAGCCGGAGGATGCTCCTGCAGCTCCTAGCTTTGAACGTTCCGAAACCCCGATCGAGATGCCTGCTTCCAGGAGCGATTTACCATGGATAAACGATTTGCAAAATAAAGAATGGATAAACCCCAACTTACACGGATTACCATTCTCTCCAGCAACCTCTTTATTCATGACGCTGCCACCTTTTACACAGCCCGACAGCATTCCGGCAAGACAACCTGTTAGAATATTCAATCCGGACGCGTACTGTGACTTGTGTAATAAGgaattttgcaataaatattttctgaaaactcACAAAGCCAACAAACACGGCATTTACTCGGACCCACCGGTATCCGAAGCTCTAGGAACTTCCGTCAACATTCCTTCCTATGCGTCTAACATCAAAATACCGATTTCCTCTAGTTCCAGTACCACCGACATTGCGTCCACTAAAACCGATCCTAAACCGCAAGTAAATGCGATAAATCCTTTTGGCGAAATCTTTCCTAATAATCCTAATCTTTTTACCAATAAGCTATTTCCTAAAATCAATAAACCTAACATTCAAGGATTGTTCGATCCAGATGCTTCGGAAGGCGCAGCAGCTCCCGATTTCAATTCATCCTCTGGATTATGTAACGGACAGACGGAGCGTAATATTGTTGCCGATGAGACAATAGCTGAGGAAACGTCGAGTCCCAAGGCTGTCCAACACGACCCAGCGTTGCTAAAGAGCGAATTTAGTTTCGAAGAAGGAACGTATTTTACCTCGCCGGGTAAAATGTCACCAGGTCAGCAATCCCGCGAATTAGACTTGAACCGCTTGAGAAGAATAGGCGTCATGAATCCTAAAGCATTTTGCGAGATATGTTGTAAAGagtattgtaataaatattttttacgaaCGCACAAAATGAAACGTCACGGAATATTCATACCCGAGGAGAGTAAAGACAACAAGGATGTTAAAATGGAGCCGACTTGGTCCCATAATATGCAAACGAGTCCTTTAAATCTCATTATGGCCGAGCAAAATTCGAACACATCGGAACGTAAAACGATATCGCCTGCAGATATCTGTTGCGATACATGcggaattaaatttcaaaacgcCAGTTTAGCCCAGCTTCACAATGTGAGTGTACATTCCAGAATAACCCACGCTGGACAAGATATGTCTGATCTATGCGCCGAAGAATTAGCGCGAAGTAGTGCCACCGATCCTCAAAGTATGGGCGAGAAAAACGTTAACTCCGCAGATGCCATCAGcgaagatttacaaaaattgcaGACTATGATACTGCAACTTAATGATTTAGACGTTAATAGAGCCGCCAGTGTGTGCAACGTTTGTAATAAAGAATTCGAAAATCGGTATTACTTGCACGCGCATATGATGGCTGAACACGGTTTACTGGTAGAGGAGGGAACAGATGTTGAGAAAAACGGAGAATCTGAAAGTGTAACAAACAATAACTCTGTATGCGACTTATGTAGTAAGGAAGTGCAAAGTGGTGAAGACATGAAAAAACATTTGTTAGAATGCCATCCTAATCAACAGCATTCTAACGAAATTAAGGAAGAAAGTTTCGCCAACACCGAAAAAGGAGTAGTTCGAGGAAATTCAACCGGCGGGCAATTTGTCGATCGCCGTAGTTCCATGAGTCTTACCCCCAGCAGTAGCTATTGTGAAATATGCAACAAAGAACTGTGcaacaaatattttatgaaaactcATATGCAAAGGATGCACGGCATAGAGATAGAAAACGGAGCTCAGATCGGTGGGGTGATATGCGACATTTGCAACAAAGAGCTTTGTAGTAAATACTTTTTGCGAGTTCATAAGCATAATACGCACGGTATAGTTGAGTACGGTTCGAGTTTGTTACAACCTCGAAAGAACGACGTGGAAACGGCTCCTTTGCTGCCCGCCGAACCGGATCCTGCACTGAAACCGGGAGATCTCGCCGATCTTAGTCATCGTTACTTCACACATTTTACTGAAGTTTGCACAATTTGCAGTCGTCGTTTTCGTAGCACTAAGTGGCTGAAAGCCCATCTCTTGAGCGATCATGGTCAAGCAGGTGCGGAAAAGTGGGCAGAACTTGAACAACAACTTCAGCAGTCAATGAGCCAGAATTCGAAGTCGTCCGGAAACGTAAAAACCCCACAAAGCGAACGAGCCAGTCCAACTTTAAAAATACCGAACGGTAGTCAAGAGAGTACTTCAAAAGTGGGCATACAGAATGTTCTATCGAGTATCTTCGGAGCCGACGAAACGACTCCCAAGAATTATCATTGTTCGTACTGCCCTTTTTCTACACCCGTCCTTCCTTTCTTATTTGTGCACGAACGTTCTCACTCGATGCAGTCAACCGAAGGGGACAATTCTTCGTTAAAATGTCCGGTTTGTACTCAGAATTTTTCCCAAGCAGAACTACTCCAACATCATTTGTTTACTCAGCATCCGTTCTTTCCTTTGCCACCGTTTTTCAATGGCAACGCAGAACCGCAAACGGAGACCCAGACATCAAAAGAAACTTGCGATGGTACCGAGGAAGATTTGAAAGTGGAAGAAGCTGCTGCGTCTCCCACTGAAACCAACAAACAGCCACAGGGGATCAAAGCGAAGAAGGTGAAGCGCAGATTGAGTCGTTTGGAACTGTCACCAGAGGTGAGTCAGTCGTTAAAGGATGTAGCGAAGAGGTCACAGCTGCCGGCGACATACGCACTACCTCAAATCGGAGAGCAGGCAGGTACATCTGGATACGTGATGCAGGCTTTTCTTCTTGATGAGCCAGCAGTCGAGCGTAGGTTTGTACCGTCCGTGGTGTTTCTGCCCGTTATGCAGAAGCAGTCGGCTCCAATTACCGTGACTTTCACCCTTACCCCGGCTTAA
Protein Sequence: MTTSATLPSTTGPVHAGGFSAISEDTAASEPAFETPRPIKRCLIAPLTDSCKKRRKQATPVRISAADSDLVPSEGKLPIASPEPDLRCPLCQLAFNKPERLQNHIATEHANVQCKKEPEDAPAAPSFERSETPIEMPASRSDLPWINDLQNKEWINPNLHGLPFSPATSLFMTLPPFTQPDSIPARQPVRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYSDPPVSEALGTSVNIPSYASNIKIPISSSSSTTDIASTKTDPKPQVNAINPFGEIFPNNPNLFTNKLFPKINKPNIQGLFDPDASEGAAAPDFNSSSGLCNGQTERNIVADETIAEETSSPKAVQHDPALLKSEFSFEEGTYFTSPGKMSPGQQSRELDLNRLRRIGVMNPKAFCEICCKEYCNKYFLRTHKMKRHGIFIPEESKDNKDVKMEPTWSHNMQTSPLNLIMAEQNSNTSERKTISPADICCDTCGIKFQNASLAQLHNVSVHSRITHAGQDMSDLCAEELARSSATDPQSMGEKNVNSADAISEDLQKLQTMILQLNDLDVNRAASVCNVCNKEFENRYYLHAHMMAEHGLLVEEGTDVEKNGESESVTNNNSVCDLCSKEVQSGEDMKKHLLECHPNQQHSNEIKEESFANTEKGVVRGNSTGGQFVDRRSSMSLTPSSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICDICNKELCSKYFLRVHKHNTHGIVEYGSSLLQPRKNDVETAPLLPAEPDPALKPGDLADLSHRYFTHFTEVCTICSRRFRSTKWLKAHLLSDHGQAGAEKWAELEQQLQQSMSQNSKSSGNVKTPQSERASPTLKIPNGSQESTSKVGIQNVLSSIFGADETTPKNYHCSYCPFSTPVLPFLFVHERSHSMQSTEGDNSSLKCPVCTQNFSQAELLQHHLFTQHPFFPLPPFFNGNAEPQTETQTSKETCDGTEEDLKVEEAAASPTETNKQPQGIKAKKVKRRLSRLELSPEVSQSLKDVAKRSQLPATYALPQIGEQAGTSGYVMQAFLLDEPAVERRFVPSVVFLPVMQKQSAPITVTFTLTPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00400034;
90% Identity: iTF_00789782;
80% Identity: -