Mvil081106.1
Basic Information
- Insect
- Melanotus villosus
- Gene Symbol
- Zbtb41
- Assembly
- GCA_963082815.1
- Location
- OY720426.1:6579399-6582680[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.0012 0.26 14.2 4.4 1 23 151 173 151 173 0.99 2 21 0.25 57 6.9 3.9 2 23 256 277 255 277 0.95 3 21 0.0046 1 12.3 3.4 1 21 281 301 281 303 0.95 4 21 0.43 98 6.1 8.7 1 23 309 331 309 331 0.97 5 21 0.048 11 9.1 2.2 1 19 337 355 337 357 0.98 6 21 0.006 1.3 12.0 2.4 1 23 402 424 402 424 0.96 7 21 0.026 6 10.0 3.3 1 23 430 453 430 453 0.96 8 21 6 1.3e+03 2.5 2.5 3 23 472 489 470 489 0.86 9 21 0.00055 0.12 15.3 4.5 1 23 495 517 495 517 0.98 10 21 5.7 1.3e+03 2.6 3.6 1 19 523 541 523 541 0.95 11 21 0.00057 0.13 15.2 2.0 3 23 562 582 561 582 0.97 12 21 3.8e-05 0.0085 18.9 2.3 1 23 586 608 586 608 0.98 13 21 0.021 4.7 10.3 7.9 1 23 614 636 614 636 0.98 14 21 0.97 2.2e+02 5.0 2.2 1 23 642 665 642 665 0.91 15 21 0.087 20 8.3 0.5 2 23 683 701 682 701 0.92 16 21 2.9 6.6e+02 3.5 5.2 1 23 707 730 707 730 0.90 17 21 0.0044 0.99 12.4 2.9 1 23 761 783 761 783 0.98 18 21 0.18 40 7.3 2.5 1 23 789 812 789 812 0.96 19 21 6 1.4e+03 2.5 3.0 2 23 830 848 829 848 0.83 20 21 0.035 7.8 9.6 3.7 1 23 854 876 854 876 0.98 21 21 2.4 5.5e+02 3.8 2.6 1 23 882 905 882 905 0.96
Sequence Information
- Coding Sequence
- ATGAGTATTAATAAAGCATCATTACCAATGCAGAAATGTAGCACCGATGGTCTTCCAGAATGTTACGTTAGGTTAGTTCGTTTGCCTGAAAATATAACTCCGACCcaaacagtaaaaacaaacgaatgtGTGAGTACTTCGCAGCAACATATCTCATCGAAGAACTGTCACTATATTGTACTTGATAATCACTCAAGTTACTGTTTGACGTGTAAACAGTTAATTCAAGATTTCCatcaatttaaacaaaacgttCAAAGTCGGCGAAATGAAAGCTCATTCTGTAGCTCTTCGTTTAATCGCCACAAAGGCTCTGAATGTCGTGGTTTAAGTACACATGTTAATAAATTATCGGGTGCTGCAGTGGAAACAGAACTAAATGTAAACGAAGACGAAGAGAAAAATCAAGatcagaattttattaataagcgGAAAAGCAAAATATATGTTTACAAATGCTTCATTTGTCAAAAACAATGCATTCATAAAGGGTCTCTCGTAGATCACATGAACTCTCATACTAATGAAATTCTTGAGACAACCGATCCTATCGTTGCTGcaaatcaaaacttaaaagaTGAGCGCAAGGATGTTGAATTAAAAAACGAAGAGGCGATCAAAGTTGAAACGGAAACAAACTCGAGGATAATTTGTTCGAGCCCCTTAAGCAATGCTTCTGAAGAAGACATCCTTCAACCACATTTCCAagacattaaaatcaaaatcgaAAAGCCCCTGGAAATGGAAGAACCGAACCAAAGCTGTATTTGTTCCATTTGTCGTAGATATTGTGGTACATCCGCTCGTCTGAAGAAACACATGTTAGCACATGAAAAGCCGTACAAATGTAATATATGTAACATGAGACTTTCGTACCGTAAAAGCCTAAACCGtcatattttatgtcatactggcaTTAAACGATTTGCATGTCATATTTGTCACAATTGTTATACGACAAAGGTTTCGCTCGCATGTCATATAAAAACACATATAGGCGAAAAACCGTATCCTTGCAAACAATGTGACTTTGCAGGAAAGACGAGGTCTGAATTACGAAAGCATTGTAAGTGCAAGCATTTGATGGACAAAGACACTAGGAAAATTCGGACTGCACGAAGAAAAGCCACTGTTTGTccaatttgcaacaaaaaaataCTTGAATTAAATCGTCATTTGTTAACTCACACGGGCGAGAAACCTTTCGAGTGCAATATTTGTCAGAAACGTTACACAAGTAAAACTTCTCTCGATTTTCATTTAAAGTcgcataccggagaaaaaccattttgtTGCGCAGAATGCGATTATTCGGCAAAGACGAATAAACAAGTACGAAGACATTATAATCGTATGCATACAGTTAAAGTGGCAAACTCGGATGGGAACAATGTTAACACTAAAAAAACCGATTGTCCAATTTGCAACAAAGGAGTACTTCTGTTAAAGCGTCATATGTTGACTCACACGGGTGAGAAACCTTTCGAGTGCAATATTTGTCACAATCGTTACACAACTAAAAACTCGCTCAAGTATCATATAAAATcgcataccggagaaaaactGTTTCATTGCAAAGAATGCGACTACTCAGCCTACTCACATAAACTATTACGATATCATTGTTGGTCCAGGCATAATAAGCCCACAGAAATGGAAGGAGAACCGAAACAAAGCAATATTTGTTCCGTTTGTGGTAAATATTGTGGCACAcctattcatttaaaaaaacacatgtCGGTGCATGCAAAAccatataaatgtaaaatatgcaaCATGGACTTTTCATACCGTCGAAGTCTAAACCGTCACGTTTTACGTCATACTGgcataaaacaatttgtgtGTCATATTTGTCACAATCGTTACACGACGAAGTCTTCACTCGAATGTCATATAAAAacacatacaggagaaaaaccgtatCCTTGTAAAGAATGTGACTTTGCAGGAAAAATGATGTCCGAATTACGACAACATTGCAAACGGAAGCATTTGATGCACGAAGACACTAGGAAAATTCAGACTGAATCAAAGAAAGCCACTGTTTGTCCAATTTgcaacaaaacaatatttgatTTAAGACGCCATATGTTAACTCACACGGACGAGAAAACTTTTCGTTGCGCACAATGCGATTATTCGGGAAAGACGAAGAAACATGTACGAGAACATTGTAATCGTATGCATACAGTTAAAGCGGCAAACTCTTGTccaatttgcaacaaaaaagtGCTTGCCTTAAGGCCTCATTTATTAACTCACAGCGGCAAAAAACCTTTCGAATGTAACATTTGTCACATTCGTTATAAGAGTAAGGATTCGCTCGAATTTCACTTGAAGTcgcatactggagaaaaaccgttttgTTGCACGGAATGTGATTATTCGGCAAAGACGAATAAACAAGTAGGACAACATTATAATCGTATCCATGCAGTTAAAGTGGTAAACTCAGACGGGAACAATGTTAACACCAAAAAAACCGTTTGTCcaatttgcaataaaagaatACTTCAGTTAAAGCGTCATATGTTGATTCACACGGGTGAGAAACCTTTCAAGTGCGATATTTGTCACAATCGTTATACGACTAAAGTATCACtcgaatttcatttaaaatcgcATACAGGTGAAAAACCGTTTCGATGCACAGAATGCGATTATTTGGCGAAGACCGACAAGCAAGTACGATACCATTATAAACGTAAACATACAGATAAAGTCAAACGCACAAATGGAAACATTTCtcactttcaaatttttgaagcaATGGATCCAACTTCTAAAAGAGTTGCTTTGGAAGAAGACGTGCATGAATCCCACTCTCGGAACATTAAAATCGAAATTCTAGAAGCAACCGATGCAGCTTCCGAACCTCATTTTGACACTATAAGCAATGCTTCTGATGAAGACGTCTATGAGCCTAACtttcaaaacattaaaattgaagttcTTGAGGCAACGTACCCAACTTCCGAACCTGGTTTTGAAACTTTAAGCGATGCTTTCGAAGAAGACAAGCATGAAGCTCACCTTCGAAATCTTAAAGGCAACATTTGCGAAGCAGTTGACCCATTTGAAGAACCTGAACATATACAAAATAGCATACACGAGGAGGTCGAACTAAAAGATAAAGCGATGCATGTAAATACTCATAACGaagttaaaactgaaacaagCAAAGCTACCGATTTAATAGAAACCATTAAGCCCGAGGAAGTCCAAATAAAAGACGAGTTAATATACAAAGATAATCAAGTTTTTACCATTTGTTTGTAG
- Protein Sequence
- MSINKASLPMQKCSTDGLPECYVRLVRLPENITPTQTVKTNECVSTSQQHISSKNCHYIVLDNHSSYCLTCKQLIQDFHQFKQNVQSRRNESSFCSSSFNRHKGSECRGLSTHVNKLSGAAVETELNVNEDEEKNQDQNFINKRKSKIYVYKCFICQKQCIHKGSLVDHMNSHTNEILETTDPIVAANQNLKDERKDVELKNEEAIKVETETNSRIICSSPLSNASEEDILQPHFQDIKIKIEKPLEMEEPNQSCICSICRRYCGTSARLKKHMLAHEKPYKCNICNMRLSYRKSLNRHILCHTGIKRFACHICHNCYTTKVSLACHIKTHIGEKPYPCKQCDFAGKTRSELRKHCKCKHLMDKDTRKIRTARRKATVCPICNKKILELNRHLLTHTGEKPFECNICQKRYTSKTSLDFHLKSHTGEKPFCCAECDYSAKTNKQVRRHYNRMHTVKVANSDGNNVNTKKTDCPICNKGVLLLKRHMLTHTGEKPFECNICHNRYTTKNSLKYHIKSHTGEKLFHCKECDYSAYSHKLLRYHCWSRHNKPTEMEGEPKQSNICSVCGKYCGTPIHLKKHMSVHAKPYKCKICNMDFSYRRSLNRHVLRHTGIKQFVCHICHNRYTTKSSLECHIKTHTGEKPYPCKECDFAGKMMSELRQHCKRKHLMHEDTRKIQTESKKATVCPICNKTIFDLRRHMLTHTDEKTFRCAQCDYSGKTKKHVREHCNRMHTVKAANSCPICNKKVLALRPHLLTHSGKKPFECNICHIRYKSKDSLEFHLKSHTGEKPFCCTECDYSAKTNKQVGQHYNRIHAVKVVNSDGNNVNTKKTVCPICNKRILQLKRHMLIHTGEKPFKCDICHNRYTTKVSLEFHLKSHTGEKPFRCTECDYLAKTDKQVRYHYKRKHTDKVKRTNGNISHFQIFEAMDPTSKRVALEEDVHESHSRNIKIEILEATDAASEPHFDTISNASDEDVYEPNFQNIKIEVLEATYPTSEPGFETLSDAFEEDKHEAHLRNLKGNICEAVDPFEEPEHIQNSIHEEVELKDKAMHVNTHNEVKTETSKATDLIETIKPEEVQIKDELIYKDNQVFTICL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -