Basic Information

Insect: Melanotus villosus
Gene Symbol: Gyc76C
Assembly: GCA_963082815.1
Location: OY720426.1:59571471-59577163[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.3e-05 0.0096 18.7 2.2 1 23 243 266 243 266 0.93

2 7 0.0091 2.1 11.4 0.4 2 23 288 310 287 310 0.97

3 7 0.047 11 9.2 0.9 1 20 324 343 324 345 0.94

4 7 2.2e-05 0.0049 19.7 0.3 2 23 427 449 427 449 0.96

5 7 1.5e-05 0.0034 20.2 0.4 1 23 455 477 455 477 0.98

6 7 0.0008 0.18 14.7 2.0 1 23 483 505 483 505 0.96

7 7 9.9e-05 0.022 17.6 4.5 1 20 511 530 511 534 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.3e-05	0.0096	18.7	2.2	1	23	243	266	243	266	0.93
2	7	0.0091	2.1	11.4	0.4	2	23	288	310	287	310	0.97
3	7	0.047	11	9.2	0.9	1	20	324	343	324	345	0.94
4	7	2.2e-05	0.0049	19.7	0.3	2	23	427	449	427	449	0.96
5	7	1.5e-05	0.0034	20.2	0.4	1	23	455	477	455	477	0.98
6	7	0.0008	0.18	14.7	2.0	1	23	483	505	483	505	0.96
7	7	9.9e-05	0.022	17.6	4.5	1	20	511	530	511	534	0.95

Sequence Information

Coding Sequence: ATGGCTGATGATacacTGCCTATTTATGCAGCTTATTTATATGACGGCGTAAAACTGTATGCAAGAGCTTTACATAATATTCTCAATGAACAACCAGAATTATCCGACGAAGCAATCGATAAAGTTATAAAGAATGGCactaaaataattcaaactatgactgaatttaaaatgtactcAAgcATAACTGGCTCGACGATATATATAGATAAACACGGTGGCGGAAAAGGTAATTTTTCAGTATTAGCAGTAAAGAAAGTTGACGATCCTTCTGTTACACTGGACAATTTAACTTGTTCATATCAGATGATACCTGTTGGTTTATTTGGAGATGATCATTTCCCAGTGtttaaaatctgtaaacaaatcGAATGGCCAAATAACATAAAACCAAgcgtAAGTACCTGTGAAACAGATTCTAATAATGTAAAATGGAGCTATAAGTTGAGTTCGTGTGTACCTGAAATAGAGTGGAACGAGGATCATTTAATTTGCCAGCCATGTATCACACAACTGGAGGCTGCTTGTGCCTTTCGAAATTTATGTTTGCAATCGACGGTAGTACGCAAACGACAGTGGGACGATcagttaaaaatagaaaagactGTATCGCCTGATCATGTATATGAAGATAGCATGGATTATGTTGATATAAAATTAGATGAATCCGAAGATAGTGACGATTCGTTAAAGAACCATTATACGAATGCATCGCAAAAGCTGCATTATCAGTGTAAATATTGTGGTATTGAATTTAGCGACCGAAAGGCACTAACGCATCACAATAAAGATAGTCATCAGTTAGACCGTCCTTATGATTCTCACATACGAACTAAACATAGTACTAAAAAGTTTACGAAACAATGTAGTTTGTGTCAGAATACATACATAAATCAAATTGTACTTGAGGATCATATGCGAAAGGAGCACAGTATCGGTACGACTAAATTAGTGAAAAGAGTTAAGCAGCATAAGTGTGATAAATGTTCAAAGTTATATACTACGGAAAAGGCCATGAAAGTTCACCGTGCAAATTGCGACGGCATTAAAAGGCACAATATTAAAACGACTCCAACGATAAAGATTGAAGAAGATGAGGACATGGACGCGAAGCCGGAATCACCAGAAATAGTTGCCGTTATAATAAAGAATGAAGCTAAGTCATACGAAGAAGGCGATCAAAAtgAAGATTTCACAAATTCACTTCCGAAAGAAAACGATAAGGTTGCAACACCTACAAACAAACGTGGAAGGAAAAAATTAGAGCAAATATCAAATGTTTGTCAAATTTGTGGAATGGTGTTTAACACACGATATTTAGCCAAACGACACATGCGTAACGTGCATGCAACAGAGAAAAACTACAAATGCGATATTTGCGAACAGAAATTCGCAAGCCCCGTGTATTTAAATGCACATAAACGTTATCATTCAGGTGAGAGGCCACATATTTGCTCTTTCTGTGGTAAAGGTTTCATAACGGGTAGTGATTTATACCATCATGAGAAAATCCACGCAAATAAACGAGCGTATAAGTGCGATAAATGTCCGAAGGCGTTTAATACTTCTTCGGATTTGCATAAACATAAGTTGTGCGTGCATCAAGACAGAAGCCAATGGAAGTTATGTCAATGTGGATTGAGGGAATTAGCATCGGCTGGTTTTACAAACTTCTCAAGAGTTTTGCTTGGTGCTTAA
Protein Sequence: MADDTLPIYAAYLYDGVKLYARALHNILNEQPELSDEAIDKVIKNGTKIIQTMTEFKMYSSITGSTIYIDKHGGGKGNFSVLAVKKVDDPSVTLDNLTCSYQMIPVGLFGDDHFPVFKICKQIEWPNNIKPSVSTCETDSNNVKWSYKLSSCVPEIEWNEDHLICQPCITQLEAACAFRNLCLQSTVVRKRQWDDQLKIEKTVSPDHVYEDSMDYVDIKLDESEDSDDSLKNHYTNASQKLHYQCKYCGIEFSDRKALTHHNKDSHQLDRPYDSHIRTKHSTKKFTKQCSLCQNTYINQIVLEDHMRKEHSIGTTKLVKRVKQHKCDKCSKLYTTEKAMKVHRANCDGIKRHNIKTTPTIKIEEDEDMDAKPESPEIVAVIIKNEAKSYEEGDQNEDFTNSLPKENDKVATPTNKRGRKKLEQISNVCQICGMVFNTRYLAKRHMRNVHATEKNYKCDICEQKFASPVYLNAHKRYHSGERPHICSFCGKGFITGSDLYHHEKIHANKRAYKCDKCPKAFNTSSDLHKHKLCVHQDRSQWKLCQCGLRELASAGFTNFSRVLLGA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -