Basic Information

Insect: Melanotus villosus
Gene Symbol: -
Assembly: GCA_963082815.1
Location: OY720419.1:45661316-45663836[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.023 5.1 10.2 1.3 2 23 113 134 112 134 0.95

2 14 0.25 57 6.9 1.7 2 20 140 158 139 160 0.92

3 14 8.6e-05 0.019 17.8 1.6 1 23 173 195 173 195 0.96

4 14 0.00083 0.19 14.7 1.4 3 23 200 221 199 221 0.93

5 14 0.091 21 8.3 6.1 1 23 230 252 230 252 0.98

6 14 0.009 2 11.4 3.1 2 23 286 307 285 307 0.97

7 14 0.076 17 8.5 1.1 1 23 310 333 310 333 0.97

8 14 0.012 2.6 11.1 3.7 2 23 343 364 342 364 0.96

9 14 0.042 9.5 9.3 4.2 3 19 373 389 371 395 0.89

10 14 9.1e-05 0.021 17.7 0.9 2 23 406 428 405 428 0.96

11 14 0.00036 0.081 15.8 1.1 1 23 435 457 435 457 0.98

12 14 0.00014 0.032 17.1 0.4 1 23 464 487 464 487 0.95

13 14 2.1e-05 0.0047 19.7 4.8 1 20 493 512 493 515 0.95

14 14 0.00018 0.04 16.8 1.2 3 23 523 544 522 544 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.023	5.1	10.2	1.3	2	23	113	134	112	134	0.95
2	14	0.25	57	6.9	1.7	2	20	140	158	139	160	0.92
3	14	8.6e-05	0.019	17.8	1.6	1	23	173	195	173	195	0.96
4	14	0.00083	0.19	14.7	1.4	3	23	200	221	199	221	0.93
5	14	0.091	21	8.3	6.1	1	23	230	252	230	252	0.98
6	14	0.009	2	11.4	3.1	2	23	286	307	285	307	0.97
7	14	0.076	17	8.5	1.1	1	23	310	333	310	333	0.97
8	14	0.012	2.6	11.1	3.7	2	23	343	364	342	364	0.96
9	14	0.042	9.5	9.3	4.2	3	19	373	389	371	395	0.89
10	14	9.1e-05	0.021	17.7	0.9	2	23	406	428	405	428	0.96
11	14	0.00036	0.081	15.8	1.1	1	23	435	457	435	457	0.98
12	14	0.00014	0.032	17.1	0.4	1	23	464	487	464	487	0.95
13	14	2.1e-05	0.0047	19.7	4.8	1	20	493	512	493	515	0.95
14	14	0.00018	0.04	16.8	1.2	3	23	523	544	522	544	0.97

Sequence Information

Coding Sequence: aTGCGtcacattaaaatttcaaagggAAACAATGATAATTTATCTACTTTTAAGAAACAGatcaacaatattcttcaaaaaattaataatttcgatgAAGCGGAAAAAAGTGAAGCTTTAAATTATGTACGGCAATTTATTGACACTGATAATTCTGATGTATCGAATAAGTCTGAAACTGAAAATGCCGTTGTTGATTGtgataaaaatatggaaaaggtAATATCAACTGCATCtaataataagaagaataagGTGCGTTGTAAAAAACGAAGAAGATCAGTAATTGAAAAGCCACGTCTGCAAGTTGggaaagtaaaagtaaaaccGTTGTTGAAGTGTAAAGTCTGTGATGAaaccaagaaaacaaaaattagtttactAAAGCATATGGAATTTCATATAGGTACCCCTGTTACTTGTTTGAAATGCCGACGTACGTTTAATAGTAAAACGACATTTGATTGGCATAAGATTCATTTATGTCGAAAAAGGAAACGAGTGCTAACTAAACGATTTAAATGTTCCGAATGTCCCAAAGAGTTTAGATTACAAAggcatttaaatttacatttagaaGGACACAAACGGAATAATTGCTCATATTGTGATACAGTATTAACAAGGCGTGAACATCTTGTCCAGCACATGTTGGATAAACACAAAATCAAGTTAGAAAAACCTGGCTTTAAATGTGATCATTGTGACAAATGGTATGTGAAACGTCGTTCTTTATATCATCATTTACAACAGCATGCACCATCAAAGTTAATTTGCCTCGAATGTGGAAATATTAGTAACACTGAAGAAGAGCACAGTGCTCATATAAAGAAGCACGAAGAACAAAAACCATGGCAATGCCCAAAGTGTAAGGATAGATTTTCAAGAAGGCAGCagtatttttatcatttaaaaCGACATGATCGTTACAAATGCTTATCATGCAATGAAAGTTACGCATCCAAGGCTCGTGTGTATAGACATAAACAACGTGGTCATATGGTACAAGGCTTAGAACCACGATTACATTGCCCTCATTGTCCGGCTGCATTTCATAGAACCCTACTATTACAGATGCACATTCGAAAACATAAAGaggacgaaacaaaaataaattgtaaattctgTGATAAAACCTTCCACACACCGTATCAGTATTACAAGCATTGTATGACAATTTTACACGATAAAAATAGTCCAGAAATTAATCAGTTGGTCTGTGAAAATTGTGGTAAACAGTTCACGAAAAAATACGTATTGGAGCAACATTTACAGCGATTTCATGGAGCTAAACCTGGTATCTTTTCATGCAAATATTGTCCTTATTCAACGCAATTTAGACCAAATCTAGCAAGACACATGAATTTACACTTTACTGTCGGAAAACAATTTGTGTGTGATCATTGTGGAAAATCCTTTTCTACTATTGCTATCCTCACTGATCATATTAACTATATCCACATACAAgaaaAGCAATTCCAGTGTAACAGTTgtgataaaagttttaaaagaaaatcagaatTAGTGCGTCATCAATCATGTCATTCTGATGCCCGTCCTCATGGCTGTCAACTCTGTGGACAGACTTATAAGAGAATATCTCATTTAAGACGTCATGAGGAAACTGCACATGCtcttgttaataaaactaatcGAGTTCAACGTCTAAAAACCGATGATACAGGCGCTGTAATTCCGATTccaatggaaaagaaaaaatcaatgaagaataaaaacaataacaaacaggataataataaagatgCAGTTTATTCACTTGCAAATAATGAACCAAGTGAATATTTAGGTGTTTCTGTGCCTGTTATTAGTTCAGTTACGCTACCGAAAAATATcgaagataatttaattaatttggataCAAGTGGATTTAATCAACAATTTTGGACTGATAAGTTGAATTTGCAAGTAGATAAAGATGTCCCAATTGCTTATAACACGGACCCATCTAATTTGGAACAAATGCCGACATTTAGCGAACACGGAAATGATTTACAAGCTTTTAATATTGTAGATCAATTAGTTAATTCTTTATTACCATCCAAAGACTTGCAAATAGTTGATTGTCAAGTATATAATGATTATTCTGATACGCCATTGGAATACAGCAATCTTCATATTTCCGGATTAAATAAAAGTGATGATGTTCTAACTGCTACTGAAAATAATGTAACATGGTAA
Protein Sequence: MRHIKISKGNNDNLSTFKKQINNILQKINNFDEAEKSEALNYVRQFIDTDNSDVSNKSETENAVVDCDKNMEKVISTASNNKKNKVRCKKRRRSVIEKPRLQVGKVKVKPLLKCKVCDETKKTKISLLKHMEFHIGTPVTCLKCRRTFNSKTTFDWHKIHLCRKRKRVLTKRFKCSECPKEFRLQRHLNLHLEGHKRNNCSYCDTVLTRREHLVQHMLDKHKIKLEKPGFKCDHCDKWYVKRRSLYHHLQQHAPSKLICLECGNISNTEEEHSAHIKKHEEQKPWQCPKCKDRFSRRQQYFYHLKRHDRYKCLSCNESYASKARVYRHKQRGHMVQGLEPRLHCPHCPAAFHRTLLLQMHIRKHKEDETKINCKFCDKTFHTPYQYYKHCMTILHDKNSPEINQLVCENCGKQFTKKYVLEQHLQRFHGAKPGIFSCKYCPYSTQFRPNLARHMNLHFTVGKQFVCDHCGKSFSTIAILTDHINYIHIQEKQFQCNSCDKSFKRKSELVRHQSCHSDARPHGCQLCGQTYKRISHLRRHEETAHALVNKTNRVQRLKTDDTGAVIPIPMEKKKSMKNKNNNKQDNNKDAVYSLANNEPSEYLGVSVPVISSVTLPKNIEDNLINLDTSGFNQQFWTDKLNLQVDKDVPIAYNTDPSNLEQMPTFSEHGNDLQAFNIVDQLVNSLLPSKDLQIVDCQVYNDYSDTPLEYSNLHISGLNKSDDVLTATENNVTW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -