Mvil081095.1
Basic Information
- Insect
- Melanotus villosus
- Gene Symbol
- Zbtb41
- Assembly
- GCA_963082815.1
- Location
- OY720426.1:6501253-6505182[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 1.4e-05 0.0031 20.3 1.6 1 23 189 211 189 211 0.99 2 23 0.0023 0.51 13.3 3.7 1 23 348 370 348 370 0.97 3 23 0.00063 0.14 15.1 0.5 2 23 381 401 380 401 0.97 4 23 0.014 3.2 10.8 1.0 1 23 407 429 407 429 0.97 5 23 0.17 38 7.4 4.7 1 23 435 458 435 458 0.95 6 23 0.00089 0.2 14.6 4.9 1 23 500 522 500 522 0.98 7 23 0.003 0.69 12.9 1.4 1 23 528 551 528 551 0.97 8 23 8.9e-06 0.002 20.9 3.7 1 23 593 615 593 615 0.99 9 23 0.11 26 8.0 1.7 1 23 621 644 621 644 0.95 10 23 6.2 1.4e+03 2.5 2.2 3 23 664 681 663 681 0.83 11 23 0.056 13 8.9 2.2 1 23 687 709 687 709 0.98 12 23 0.0013 0.29 14.1 1.3 1 23 715 738 715 738 0.97 13 23 7e-05 0.016 18.1 3.6 1 23 780 803 780 803 0.95 14 23 0.0044 0.98 12.4 2.9 1 23 809 832 809 832 0.96 15 23 2.1 4.7e+02 4.0 2.1 1 23 884 907 884 907 0.94 16 23 0.082 18 8.4 0.1 3 20 926 942 925 943 0.94 17 23 1.6 3.5e+02 4.4 0.1 8 23 943 958 942 958 0.94 18 23 0.16 35 7.5 2.2 1 23 964 987 964 987 0.95 19 23 0.00061 0.14 15.1 2.9 1 23 1030 1052 1030 1052 0.98 20 23 0.019 4.3 10.4 0.4 1 23 1201 1223 1201 1223 0.97 21 23 0.0042 0.94 12.5 2.3 1 23 1229 1251 1229 1251 0.98 22 23 1.2 2.7e+02 4.7 6.7 1 23 1257 1279 1257 1279 0.98 23 23 0.0063 1.4 11.9 3.8 1 23 1285 1307 1285 1307 0.98
Sequence Information
- Coding Sequence
- ATGGAAACGAAAACGCAGGTATCTGATTGTTCCGCTGTGTTAGTACTTTTACCTAAAAGTATAAGTCACAATATGTTGGATAGTTGTGATACTCTTTCAACGAGTATTAATAAAGCATTGTTACCAACGCAGAACTTTAGCACCGATGGTTTACCAGAATGTTACGTTAGGTTAGTTCGTTTGCCTGAAAATATAACCCCGAACCAAGCGGTAAAAGCAAGCGAATTTAATAGTTTCGAATGTGTGAATACTTCGCAGCAACATATCTCATCGGAGAAATGTCATTATATTGAACTTGATAATCACTCAAGTTACTGTTTGACATGTAAACAGTTAATTCAAGATTTCCATGAGTTTAAACAAAACGTTCAAAGTCAAGGAAATGAAAGTTCGTTCTGTCGATCTATGTTTAATCACCAAAAAGGCTTGGAGTGGCGTGGTTTAAGTGCACATGATAATAAATCATCAGCTGTTGCAGTAGAAACAGAACTAAATTTAAACGAACATGAAGAGAAAGATCAAGATCagaatcttattaataaacagaaaaggaaaatatatgTTTACAAATGCTCAGTTTGTCCAAAACGATACATTCATAAAGGGTCTCTCGTCGATCACATGAAGTCTCATActaatgaaaaatcatttaaataccCGGCAAGCGATTATTCagcaaatgaaatttttgaaacaaccGATCCTATCGTTGCTGcaaatcaaaacttaaaagaTGATTCTGAACATACAGAAGAAGATGAGCACAAGGATGTTGAATTGAAAAACGAAGAGGCGATCAAAGTTGAAAAGGAAACGAACTCGAAGATAATTTGTTCGACCTCCGAATCTCACTTTGAAGAAGACATGCTTGAACCTTATTTTGAagacattaaaattgaaattcttgAAGCAAACGACCCAATTgttgctgaaaattttaaactggaTTTCGAAgaagacgagtttaagaagaacgTGCAAAGTCAGAGAAAAGAAAGTTCGTTGTGTAGTTCTGATGCAAAATTAATGGAAGCGGAACAATTTGCATGTCATATTTGTCAGAATACTTACACGACGAAGGTTTCGTTCCAGTATCATATGAAATTGCATAAAATTCAGACTGAACCAAAAAATGTTACTGTTTGTCCAATTTGTAACAAAAGAATACTTAATTCAAACTTAAAGCGTCATATGTTAACTCACACGGGTGAGAAACCTTTTGCATGTGATGTTTGTCTGAAACGTTACACAAGTAAAGACTCGCtcgaatttcatttaaaatcgcatactggagaaaaaccattttgtTGTACAAAATGTGATTATTCGGCAAAGACGAATAAACAAGTACGACAACATTATAATAATATGCATGCAGTTAAAGTGGCAAACTCGGACGGAAACaatgttaaacaaaaaaaaatggtttgTCCAATTTGTAACATAAAAATACTTCAGTTAAAGCGTCACATGTTGACTCACACGGGTGAGAAACCTTTCCAGTGCAATATTTGTCAGAAATGTTACACAGCTAAACATTCGCTCGAATATCATATACAATTGCATACAGAAGAAAAACCGTTTCGTTGTACAGAATGTGATTATTCGGCAAAGACGAATATTCAAGTACGAAGACATTATAATCGTATGCATGCAGTTAAAGTGGCAAACTCGGACGGGAACAAtgttaaaccaaaaaaaaaggtttgtccaatttgtaacataaaaatacgtgaCTTAAAGCCTCATATGTTGACTCACACGGGTGAGAAACCTTTCCAATGCAATATTTGTCAGAAATGTTACACAACTAAAGCATCGCTCGAGTATCATATAAAATCACATGCAGAAGAAAAACCCTTTCGTTGCACAGAATGCGATTATTCGGCAAGGACCGATGAACAAGTGCGATCCCATTATAATCATATTCATGCAGTTAAAGTGGCAAACTCCGATGGGAACAGTGTTGACACTAGAAAAACCGCCGTTTGTCCAGTCTGCAATAAAAGAATACTTAATTTAAGACGTCATTTGTTAACTCACACCGGCAAGAAACTTTTCGAGTGCAGCATTTGTTACATGCGTTATAAGAGTAAGAATTCGCTCGAATTTCATTTAAAGTcgcatactggagaaaaaccgtttcgTTGCACGGAATGCGATTATTCTGCAAAGACGAATAAACAAGTAGAAAGACATTATAACCGTATCCATGCAGTTAAAGTGACAAACTCGGACGCGAACAATGTTCGACCAAAAAAACAGGTTTGTCCAATTTGTAACGTAAAAATACTTCAGTTAAAGCGTCACATGCTGACTCACACGGGTGAGAAACCTTTCCAGTGCAATATTTGTCAGAAATGTTACTCAACTAAAAAGTCGCTCGAATATCATATTATACAATCGCATACAGAAGAAAAACCGTTTTGTTGCCCAGAATGTGATTATTCAGCAAAGACGAATAAACAAGTACGAAAACATTATAATCGAATACATGCAGTTAAAGTGGCTAACTCGGACGTGACAGTTAACACTAAAAAAACCACCATTTGTCGAATTTCCGACAAAAAAATACTTGATTTAAACTTAAAGCGTCATAGTAAGGATTCGCTGGAATATTATGTAAAATCGCATACAGAAAAAATACCGTTTTGTTGCCCAAAATGCGATTATTCAGCAAAGTGGAATAGAGACGTACGACAACATTATAATCGTATCCATGCAGTTAAAGTGGCAAACACAGACGGGACAGTTAACACTAAAAAAACCAGCGATTGTCCAATTTGCAATAAAACAATACTTCAATCAAACTTAAAGCGTCATAAGAAATGTTGCACAGCTAAATCGTCACTCGAGTATCATATAAAATCACATACAGAAGAAAAACCGTTTCGTTGCACAGAATGCGATTATTCAGCAAAGACCGACGAACAAGTACGATCCCATTATAATCATATGCATACAGTTAAAGTGCCAAACCCTGACGGGGACAATGTTAAGACTAGAGAAACCACCGTCTGTCCAATTTGtaacataaaaatacttgaTTTAAAACGTCATATGTTAACTCACACAGGTGAGAAACCTTTCGAGTGCAATATTTGTCACAATCGTTACATAACTAAATACTCGCTCGAGTATCATATAAAAtcgcatacaggagaaaaaccgtttcgTTGCATAAAATACGATTATTCAGCAAAGACCAACAAACAATTACGATACCATTATAATTGTAAACATACAGATAAAGTGAAACGTGCTAAAACAAGCAACATTCTTGAAGCAGTCAGCCCAACTGTTGCAGTTGTAAATTTCGAACAGAATTTTGAAGAACCCGAACATATACAAAACAGTATAGACGAGGAGGTCGAAGTAAAAGACAAAGCGATTCAAGTAAATACACATACTgaagttaaaactaaaacaagggAAGTTACCGATTTAAAAGAACAGCCTGAATACCTACAAACCATTAAGCCCGAGGAAGTCCAAATAAAAGACGAGTTAACATGCGAAGATAATCCAGTTTTTACTGCAGTGCCAGAAGGCGAGGACGATCTTGGAAAGCCTCCGTGCATTAGTACAGCAGAACAACCGTATGCTTGTTACGTATGTAAATTTGAGACTGCCGATGGAGATAATTTTAAACGGCATATGCTTAGCCATAAAAGAGACAAATTATTTACTTGCAATTTATGCGAGTTTAAAACTgcatataaaagaaatttaaaaacgcACATGTACATTCATTTGGATGATAAACCGTTTACTTGTAGTTCGTGTAACTTTAAAACTGTGTGTAGGCAATACCTCAAGAAGCATATGCGCACACATTCggaagaaaaaccatttgtttgtAGCATGTGTGAATTTAAGACCGCACATAAACACAGTTTGGAACAACATTTACGTATTCATACGGGGTAA
- Protein Sequence
- METKTQVSDCSAVLVLLPKSISHNMLDSCDTLSTSINKALLPTQNFSTDGLPECYVRLVRLPENITPNQAVKASEFNSFECVNTSQQHISSEKCHYIELDNHSSYCLTCKQLIQDFHEFKQNVQSQGNESSFCRSMFNHQKGLEWRGLSAHDNKSSAVAVETELNLNEHEEKDQDQNLINKQKRKIYVYKCSVCPKRYIHKGSLVDHMKSHTNEKSFKYPASDYSANEIFETTDPIVAANQNLKDDSEHTEEDEHKDVELKNEEAIKVEKETNSKIICSTSESHFEEDMLEPYFEDIKIEILEANDPIVAENFKLDFEEDEFKKNVQSQRKESSLCSSDAKLMEAEQFACHICQNTYTTKVSFQYHMKLHKIQTEPKNVTVCPICNKRILNSNLKRHMLTHTGEKPFACDVCLKRYTSKDSLEFHLKSHTGEKPFCCTKCDYSAKTNKQVRQHYNNMHAVKVANSDGNNVKQKKMVCPICNIKILQLKRHMLTHTGEKPFQCNICQKCYTAKHSLEYHIQLHTEEKPFRCTECDYSAKTNIQVRRHYNRMHAVKVANSDGNNVKPKKKVCPICNIKIRDLKPHMLTHTGEKPFQCNICQKCYTTKASLEYHIKSHAEEKPFRCTECDYSARTDEQVRSHYNHIHAVKVANSDGNSVDTRKTAVCPVCNKRILNLRRHLLTHTGKKLFECSICYMRYKSKNSLEFHLKSHTGEKPFRCTECDYSAKTNKQVERHYNRIHAVKVTNSDANNVRPKKQVCPICNVKILQLKRHMLTHTGEKPFQCNICQKCYSTKKSLEYHIIQSHTEEKPFCCPECDYSAKTNKQVRKHYNRIHAVKVANSDVTVNTKKTTICRISDKKILDLNLKRHSKDSLEYYVKSHTEKIPFCCPKCDYSAKWNRDVRQHYNRIHAVKVANTDGTVNTKKTSDCPICNKTILQSNLKRHKKCCTAKSSLEYHIKSHTEEKPFRCTECDYSAKTDEQVRSHYNHMHTVKVPNPDGDNVKTRETTVCPICNIKILDLKRHMLTHTGEKPFECNICHNRYITKYSLEYHIKSHTGEKPFRCIKYDYSAKTNKQLRYHYNCKHTDKVKRAKTSNILEAVSPTVAVVNFEQNFEEPEHIQNSIDEEVEVKDKAIQVNTHTEVKTKTREVTDLKEQPEYLQTIKPEEVQIKDELTCEDNPVFTAVPEGEDDLGKPPCISTAEQPYACYVCKFETADGDNFKRHMLSHKRDKLFTCNLCEFKTAYKRNLKTHMYIHLDDKPFTCSSCNFKTVCRQYLKKHMRTHSEEKPFVCSMCEFKTAHKHSLEQHLRIHTG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -