Basic Information

Insect: Melanotus villosus
Gene Symbol: -
Assembly: GCA_963082815.1
Location: OY720420.1:35235664-35239563[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0014 0.31 14.0 5.6 1 23 48 70 48 70 0.96

2 8 2.2e-05 0.0051 19.6 0.7 1 23 76 99 76 99 0.95

3 8 9.3e-07 0.00021 24.0 0.9 1 23 104 126 104 126 0.98

4 8 6e-07 0.00014 24.6 2.6 2 23 136 157 135 157 0.97

5 8 7.2e-08 1.6e-05 27.5 1.4 1 23 164 186 164 186 0.97

6 8 2.3e-05 0.0052 19.6 1.6 3 23 198 218 196 218 0.92

7 8 0.00079 0.18 14.7 5.2 1 23 224 246 224 246 0.99

8 8 0.025 5.7 10.0 0.5 1 16 252 267 252 269 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0014	0.31	14.0	5.6	1	23	48	70	48	70	0.96
2	8	2.2e-05	0.0051	19.6	0.7	1	23	76	99	76	99	0.95
3	8	9.3e-07	0.00021	24.0	0.9	1	23	104	126	104	126	0.98
4	8	6e-07	0.00014	24.6	2.6	2	23	136	157	135	157	0.97
5	8	7.2e-08	1.6e-05	27.5	1.4	1	23	164	186	164	186	0.97
6	8	2.3e-05	0.0052	19.6	1.6	3	23	198	218	196	218	0.92
7	8	0.00079	0.18	14.7	5.2	1	23	224	246	224	246	0.99
8	8	0.025	5.7	10.0	0.5	1	16	252	267	252	269	0.83

Sequence Information

Coding Sequence: atgGTGAATGATTACCATGTATTTTTAGCTGTAGATATAAATGAAGCCAAAGATTTAATAAATCCAGAAAACTCAGATGATGGCGGCGTCGATGGATTAGATGACACCGATTTATTAATGCCACTTGAAACCAGGAAATTACATAGTTGTCATGTATGCGAATCTAAATTCGCCCGTGCCAATCATTTAACAAGACATATGACTCTACACAGGGCAGTACTTACACATAAATGTGACAGGTGTGACAAAGCATTTGCAACACCCGAATATTTAGCTAAACATACTCAAGAAGATCATATTGATAAGCCTTACGTTTGCACAATGTGTGATAAACCATTTAGTCGCGGTGAACATCTTATTCGGCATTTAAAAGTTCATAGTACTAATGGACAGGATGAAAACCTTAAATGCTCAATTTGTGAAAAAACTTTCACAAGATCTGACCATTTAGCAAGGCATACAAAAGTCCACTTGCAACAGGACAAAAGACATGTTTGTTCAGAATGTGGGAAAGCATTTAACAggttagataatttaaaaacgcATCAACGGATTCATACAGGGCTCAAAGATAATTCTAGGCTTCATCTTTGTATCTACTGTGGGAAAGAATTTAACAACTCTAGCAATATGattgtACACATGAGACGTCACACAGGAGAACGACCTTATAAATGTAGTATATGTAGTAAAGGATTTCCCAGATCCCATGATTTAAAATGCCATGAACGCACACATTCAGGTGAAAAACCTTATCTGTGTACGTTATGTGGAAAATCCTTTAACAAAAGCAACAAACTGCTAAATTGCGTTGTAAACGATTCTGGTAATATTCTAGATCTCATATTTACTTCTGATCAAAATAGTATTGTAAACAAATTGATTTGTTCTGTACTCCCCTGTGATTCTTACCACCCAGCGTTAGATTTGTTACTTGCAGTTAATGATGATTTTTCTACTTTGAATTATAACTTTAGTCAGGCCGATTTTTATCTTATCCGCAACAAAATTGCTTTGATTGATTGGCTTTGGTACTTCGCAGCAAATTCAGTTGAACAATCATCACTATTTTTCCACGATATGTTTGTGAGTTTAATCGATAAATATGTTCCGAAACAGCTAAGTCTCCCATCGCGTTATCCGCCTTGGTACTCCATTCCACTGAAGAACTTACTTGCTGAAAAATCTGCAGCGCATAGAATTTATAAATCATCTTGTTCCGAATCAGATTATAGACAATATGCCGAATTTCGAAGACGTTGTGAACGCAGATCACGCCACGATTATAATGTGTTTATTAATGATATGCAATCATCCATGCGCCAAGAAAAATCTAACTATATGGAAATGAGTAGAACAAACAAAACATCGGAAGCGGCAGAATACTTAACAGTGAACTTAAATGAAAATAGTGAGTTAAAATTTGAGAAAGTGAATGGTGCATTAGTAACCCAAAATAGTGATGGCGAGAAAGAAATAGAAGCCAGAATTGCGAGAGGGCATGTGCAGAGACTACCAAGGCAAAGAACGACTAGAATTATACTAAGAGCTAGTTTATTCGGAAGTAAATATAGAGGAAGACCCAGGAAAAAATGGATTGAAGCCGTTGAAGAAGATTTAAAGAAGTTAAATATTCGGAACTGGGCAGAAGTGGCAAGATGTAGGAAGCGATGGCATGAGATAGTCAACAAAGCCCAAGGCCTGCATGGCCTGTAG
Protein Sequence: MVNDYHVFLAVDINEAKDLINPENSDDGGVDGLDDTDLLMPLETRKLHSCHVCESKFARANHLTRHMTLHRAVLTHKCDRCDKAFATPEYLAKHTQEDHIDKPYVCTMCDKPFSRGEHLIRHLKVHSTNGQDENLKCSICEKTFTRSDHLARHTKVHLQQDKRHVCSECGKAFNRLDNLKTHQRIHTGLKDNSRLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCSICSKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLNCVVNDSGNILDLIFTSDQNSIVNKLICSVLPCDSYHPALDLLLAVNDDFSTLNYNFSQADFYLIRNKIALIDWLWYFAANSVEQSSLFFHDMFVSLIDKYVPKQLSLPSRYPPWYSIPLKNLLAEKSAAHRIYKSSCSESDYRQYAEFRRRCERRSRHDYNVFINDMQSSMRQEKSNYMEMSRTNKTSEAAEYLTVNLNENSELKFEKVNGALVTQNSDGEKEIEARIARGHVQRLPRQRTTRIILRASLFGSKYRGRPRKKWIEAVEEDLKKLNIRNWAEVARCRKRWHEIVNKAQGLHGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -