Mvil018078.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melanotus villosus
Gene Symbol
RREB1
Assembly
GCA_963082815.1
Location
OY720419.1:12165455-12170423[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0011 0.24 14.4 1.0 1 23 62 84 62 84 0.96
2 16 0.016 3.5 10.7 1.2 1 23 97 119 97 119 0.98
3 16 1e-05 0.0022 20.7 3.9 1 23 125 147 125 147 0.99
4 16 4.6 1e+03 2.9 0.1 1 23 228 252 228 252 0.80
5 16 0.00029 0.066 16.1 1.8 2 23 258 280 258 280 0.97
6 16 0.039 8.8 9.4 0.5 1 21 329 349 329 350 0.94
7 16 0.12 28 7.9 0.1 1 23 488 510 488 510 0.96
8 16 1.4e-05 0.0031 20.3 0.8 1 23 519 541 519 541 0.99
9 16 0.0024 0.55 13.2 2.3 1 23 547 570 547 570 0.97
10 16 0.0005 0.11 15.4 1.4 1 23 986 1009 986 1009 0.96
11 16 0.0019 0.43 13.6 0.4 2 23 1261 1282 1260 1282 0.97
12 16 0.21 48 7.1 6.3 1 23 1288 1311 1288 1311 0.97
13 16 0.021 4.8 10.3 1.2 1 20 1339 1359 1339 1360 0.95
14 16 0.055 12 9.0 1.0 1 23 1429 1452 1429 1452 0.95
15 16 0.028 6.4 9.9 0.4 3 23 1500 1520 1498 1520 0.93
16 16 0.013 2.8 11.0 7.8 1 23 1526 1548 1526 1548 0.98

Sequence Information

Coding Sequence
ATGGAGATATCGTCAGAGCTAGATTTACACGCCAAAGAAACAGTTACAAACCAAAGTAATCAAAGCGACTCAGGTATATTATCCGGGACTGGAAATTCCACGTTAACGGATATGGACCGTTCAAATCGCTCAGAAAACGAAGATGTAGAAAATCGTAGCAATTGCAGTTCTCCTGATCGCAAATACCTTTGCCCAATTTGTGAAACGATGCTCACCTCCCAGCACGAATTTACTCTTCATATCAGATCTCATAATAATGAAGCGGAAGTCCAAGATTCAGAAAAAGGTTTTACGTGTCGAATTTGCTGTAAAGTGTTGAGTTCCAGTGCTAGTCTGGACAGGCATATGTTGATACATAGTGGCGAAAGACCTTTTACGTGTACATACTGTGGGGATACATTTACCACCAACGGAAATATGCACCGGCATATGCGAACCCACTCTAATAGAACCGAAAATTACGAATCGGACGGAAGTAGTGACAGTGGAGCAAGTACTGGTTCGAAATCTGTggaatataacaataataaaataactccAAAAACCGACAGCAATAAAAGTGGATTTCTGGAATATAAGTCATCCACGGATAATAAGCGAAAATACTTAAATTACGAAGCTGAAGAGACTTACAAACGATCCcgaataaaattagaaaatacgtTCGAAAACAACCAAAGTTACAGTTGCCCCGTGTGCGAAAGGGACGACTTTAGCTCGACTGATACCTTAGAAATTCATTTAGAAGACAATCACCCTGATTATCCAGCAAGGTGTAATTACTGCAGCCAGACcttcaaaaacaataaattactcAACGAACATACGAATATGGTTCACTTTAACGAAGAAAGCAAACATCAGAAGAATTCCGTTGTTGGCTTTAAGGACTTGACTTTCGTTGATTTTTCCAGCCAAAAATTTCCGTATATAGCTAAATACGAATGCGAAAAAAATCTACACAAGGTAGCAGGCGGATTGAAATTCCAATGCGAAAAATGCTCCCGCGCTTTTCCTTGTGCAAGTTCTCTCGAAATACATCAATCTAGTTGCTTAGTGGGTTTGGATTTGtccgtaaaaaataaaaattgcccTAATAAGAACGTCAACAGCATCGAAAAGGATTTAAGACGGAACGACTTTTTTGCGAGATTGGATTTACAAAATAACTCCACAGAAAAACTCGAACACGCTCAGTTAAACAacgaaaaactaataaaaattcacCAGCCCGCAATTCCACTAGCGGACAATAAGGATTTAGCCGATATTCAGTCGATAATTTCGATGACAACGAACGGTACTTTACTTCAACAATTACAAGCAAAACCCAACGATGTAAACGCTGCTATGCGAACAAACTGTAACGAAAACGAGTCGGAAATTCAAAAGCACGAAAACGAGGAGGAATCGCAAGATCTCTTTGCGGCCgaatttagaaaaatgaaattGCGTGGCGAATTTCCTTGTCGTTTGTGTACGGCCGTATTTCCAAACTTGAGGGCATTGAAAGGCCACAATCGGGCAcatttaaatggaaataataatggAACATACAGGTGTAACATGTGTCCACATTCTTCTATAGATAAAGCGGCTCTTATACGACATATGAGAACTCACAATGGGGACCGCCCATATGAATGTGCATTATGCAATTACGCATTTACAACGAAAGCCAATTGTGAGAGACATTTACGAAACAGACACGCTAAGAGTACCCGAGACGAAGttaaaaaatctataatttaCCATCCTTCCGAGGACCCCAGTAATGAAGAGATCAGCAAAATGCTAGCGAGGGACGATACTAAAGTGAACACTACAATGAAAGAACTTCCAGAAGTCAACTCTGAAAAGGCAAAAATGATCACGACCGATAATTATTTACCCACACCTGACATTCCAAGCCTTTTGTCCGAGAAAAGTCCTAGCCCGCTCGCAATGGGcaaaaatattctgaatttaAAGGCAAATTCTCCGTTTTCCTTCAACAAGCAACATTCAGTACCTCGACTAGATATTACCGATATTATCCATAACGAAACCATAAAATCAGTGCAAGACCACAGCAGTCCTAAAAACAATCAAGTGACTCCTTACGTAcctcaatttaatttttcacccAAGCTCATGAACGCTTCGACACCTCAGAAACCAAAAATAAACGTAAAGAATTTAGAATCCTTAAAAGCTCCTGAGCTAGAAACCGAAAAACCTGAAACTTACACCCCCGAACCCGAAGACCAACCCATGGACATGGCGCTAGATTTAAGTACAAAGAAAACAGAACCGAAAccacaagaagaaattaaacgaaattcCGAGGATGCTCCACAAGACTTGTCTAAGAAAAATTCGGATACAAATTCACACAACGTGAGTGAAATCCTTACTAGGCAGCTACTTAAAAATACCCCAAAAATCGACCCTGCTAATTTATATGCCCAACAATTGGCATTCTACAGAAATGGTTTTCCAGGACTACATGGTTTACCAGCGTGGCCGTTTTCACTTAATCCGCTCTTATTTCAAACATTCCCGACTCCATTGTTACCTCAAGATTCTCAGCAGGAGATTAAAGAACGTTTACAAAGGCTGCAGCTATGTGGAGGTGGTATGGTCATGGATAACTTCGCAGAAAGACTCAAAAGCTTCCACCACCAATCTACGAACTTATCTgcgtttaataattttaaattaaacgataTTAAACCCGAAATAAGTAGCCATGATACTGTATTTCCCAATCATGTCTCTACAAAATCCGAAGAAATAAAACCACTGACTTTATCGATAGACCAGAATTTGTCtgacaatttaatgaaaatgcaAAGCCCTATTCCGATCTCTAAATCTGAGCCTATGGCTTCTCCAAACTCTGTAAAAATGGTGATCAAGAACGGTGTACTGATGCCCAAGCAGAAACAGAGACGTTACCGCACCGAAAGACCATTTTCTTGCGAATACTGTTCAGCCCGATTTACTCTTAGATCGAATATGGAACGCCATATTAAACAACAACATCCACAGTACTGGTCGCAACGCCAACGGTCCAATGTAGGCAGTGGAAACCGAAAAGTGCAATCAAACAACACAAACCAACGGAGCAACTATTGTAACATAAACATTCCAAATTATGACGCACCAAAGAAACAAGACTACGAAGACACCAAAGATAATCAAATATCAGAGAAAATAAAGTATGTTATATTAGCTCAGCATCTGAAAGCTGcgcagaattataaaacagcTAATAAACACGAAAAAGTTaaggaagaagatgaagattTTCCGTTAGTTATAGATGAAAAGGAGGAGGCTGCGAATAAAATTGAAGAGCAAACTGATACTAACAAACATGTGCCTAGTAACGCTGATAATGGTGGTAGTCCTACCTCGTATGAAAATCTACGTAAGGGGCTTATCCTGGAAGAAAAATTGAAGCAAATTCGTCCTCAGGAGTACATAGAAGGGTCCAACATGGACGTCGTACAAAACTCCCAGATGGTTAAAAACGAAGATGCCCAAGACTTGGTTCCAGTGGCTCGTTTGTTAGACAACGCTTCCCAGCAGCCTTTCAAGGAATATTTCCGTAGGGAAGGCGAAGGACGTGAGGGTGGTATCAGCGAAGAAGACGAAGAGGGTTTGGTTGCTAGCAGCAGTACAAGCGAAGGAAATAATTCCGGAAGTGACGAAAATAGgtCCGAATCTGAAAACGCACCAAATAAGGCTCCTACGAAAAAGAAATCCGCTTATTCTTTAGCTCCGAATCGTGTCAGCTGCCCGTATTGTCAACGTAAGTTTCCTTGGACGTCATCCTTGCGAAGACACGTATTGACCCATACTGGACAGAAACCTTTCAAGTGCAGTCATTGTCCATTGTTGTTTACTACGAAATCGAATTGTGATCGCCATTTGTTGCGAAAGCATGGAAATTCCGCTACTGCTGTTAGTAACGACATCTCTAACAATACAACCAACTACATGATGCGTAATGTTCCGGAACGTCCCTTCAAATGTTCGAATTGTCCAAGCAGCACGTTTTCTACATATTCCAACCTTAAGAAGCACATAAGTTGCAAGCATTCTTCCCAAGGAGCACAAAGCGACGATGCACACTCGCAAGTATCCACAGGTTACGAAGCTGGAAGTTCCGAAGATGAAAAGATGTCCCAAGGGGAACATAAAACCGATTGGGATAAACAAATAACACCCCATACTAAAGCCATTCCTTCAACTATGGATGCACCAACTGCACATTTGCAGAATTCCGATTTACCATTCAAATGCCATCTGTGTGACAATTCGTTTGGTGATAGAAACGACGCCCTTGACCACATAAAAGATAGACACACTTCAGAATACGAACTGTTGATGTCTAAAAATGCACTGGATACGAATGCAACGACCCCCGATGACAACCCCAATCACGATGATAACGAAGACAACGAAGTACGAGGAAAATTTCCCGATTATGCCAATAGGAAAGTGATATGTGCCTTTTGTATGCGTCGGTTTTGGTCGGCGGAAGATTTGAGGCGACACATGCGAACACATACAGGGGAACGGCCTTTCAGTTGTGATATTTGCCACCGTCGCTTTACCCTCAAGCACAGCATGTTAAGACACAGGAAGAAACACAATCTTACTTTTGAAAGTGACAATTTAAACAGCGACGAAGACGTAAACAACGCCAACTTAGCATCTTACGATAAGTTCGTTAAAGGTAACAATAACAATTTGGTAAGTAAAAGCACGGATAGAACTGACGAATCTGATGGCACCGAAGGTAGCgatttaattagtaatttgttgGGTATTAGAGATCGTTCTATTATAGACCAGGTTTTGACCGCATCTGCCGATGATGCGGCTAAACTTTTAGGTGTTAAGGGCGGTGAGCAAGAGTAG
Protein Sequence
MEISSELDLHAKETVTNQSNQSDSGILSGTGNSTLTDMDRSNRSENEDVENRSNCSSPDRKYLCPICETMLTSQHEFTLHIRSHNNEAEVQDSEKGFTCRICCKVLSSSASLDRHMLIHSGERPFTCTYCGDTFTTNGNMHRHMRTHSNRTENYESDGSSDSGASTGSKSVEYNNNKITPKTDSNKSGFLEYKSSTDNKRKYLNYEAEETYKRSRIKLENTFENNQSYSCPVCERDDFSSTDTLEIHLEDNHPDYPARCNYCSQTFKNNKLLNEHTNMVHFNEESKHQKNSVVGFKDLTFVDFSSQKFPYIAKYECEKNLHKVAGGLKFQCEKCSRAFPCASSLEIHQSSCLVGLDLSVKNKNCPNKNVNSIEKDLRRNDFFARLDLQNNSTEKLEHAQLNNEKLIKIHQPAIPLADNKDLADIQSIISMTTNGTLLQQLQAKPNDVNAAMRTNCNENESEIQKHENEEESQDLFAAEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGTYRCNMCPHSSIDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHAKSTRDEVKKSIIYHPSEDPSNEEISKMLARDDTKVNTTMKELPEVNSEKAKMITTDNYLPTPDIPSLLSEKSPSPLAMGKNILNLKANSPFSFNKQHSVPRLDITDIIHNETIKSVQDHSSPKNNQVTPYVPQFNFSPKLMNASTPQKPKINVKNLESLKAPELETEKPETYTPEPEDQPMDMALDLSTKKTEPKPQEEIKRNSEDAPQDLSKKNSDTNSHNVSEILTRQLLKNTPKIDPANLYAQQLAFYRNGFPGLHGLPAWPFSLNPLLFQTFPTPLLPQDSQQEIKERLQRLQLCGGGMVMDNFAERLKSFHHQSTNLSAFNNFKLNDIKPEISSHDTVFPNHVSTKSEEIKPLTLSIDQNLSDNLMKMQSPIPISKSEPMASPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEYCSARFTLRSNMERHIKQQHPQYWSQRQRSNVGSGNRKVQSNNTNQRSNYCNINIPNYDAPKKQDYEDTKDNQISEKIKYVILAQHLKAAQNYKTANKHEKVKEEDEDFPLVIDEKEEAANKIEEQTDTNKHVPSNADNGGSPTSYENLRKGLILEEKLKQIRPQEYIEGSNMDVVQNSQMVKNEDAQDLVPVARLLDNASQQPFKEYFRREGEGREGGISEEDEEGLVASSSTSEGNNSGSDENRSESENAPNKAPTKKKSAYSLAPNRVSCPYCQRKFPWTSSLRRHVLTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATAVSNDISNNTTNYMMRNVPERPFKCSNCPSSTFSTYSNLKKHISCKHSSQGAQSDDAHSQVSTGYEAGSSEDEKMSQGEHKTDWDKQITPHTKAIPSTMDAPTAHLQNSDLPFKCHLCDNSFGDRNDALDHIKDRHTSEYELLMSKNALDTNATTPDDNPNHDDNEDNEVRGKFPDYANRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICHRRFTLKHSMLRHRKKHNLTFESDNLNSDEDVNNANLASYDKFVKGNNNNLVSKSTDRTDESDGTEGSDLISNLLGIRDRSIIDQVLTASADDAAKLLGVKGGEQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-