Basic Information

Insect: Melanotus villosus
Gene Symbol: Zfpm1
Assembly: GCA_963082815.1
Location: OY720418.1:111436091-111438190[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.044 10 9.3 1.6 1 23 78 101 78 101 0.91

2 13 0.00014 0.031 17.2 1.1 2 23 194 216 193 216 0.93

3 13 0.0014 0.32 13.9 0.5 1 23 224 246 224 246 0.99

4 13 1.1e-05 0.0024 20.6 1.9 2 23 249 270 248 270 0.97

5 13 0.011 2.5 11.1 1.4 1 23 276 298 276 298 0.97

6 13 2.3e-05 0.0051 19.6 5.4 2 23 305 326 304 327 0.95

7 13 9.8e-05 0.022 17.6 2.6 3 23 365 386 364 386 0.97

8 13 0.09 20 8.3 0.0 2 23 402 422 401 422 0.96

9 13 0.00026 0.058 16.3 1.3 1 20 428 447 428 450 0.92

10 13 0.00022 0.051 16.5 0.5 1 23 458 480 458 480 0.99

11 13 0.0023 0.53 13.3 5.5 1 23 486 508 486 508 0.98

12 13 5.2e-07 0.00012 24.8 2.6 1 23 514 536 514 536 0.97

13 13 0.0014 0.32 14.0 6.9 1 23 542 564 542 565 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.044	10	9.3	1.6	1	23	78	101	78	101	0.91
2	13	0.00014	0.031	17.2	1.1	2	23	194	216	193	216	0.93
3	13	0.0014	0.32	13.9	0.5	1	23	224	246	224	246	0.99
4	13	1.1e-05	0.0024	20.6	1.9	2	23	249	270	248	270	0.97
5	13	0.011	2.5	11.1	1.4	1	23	276	298	276	298	0.97
6	13	2.3e-05	0.0051	19.6	5.4	2	23	305	326	304	327	0.95
7	13	9.8e-05	0.022	17.6	2.6	3	23	365	386	364	386	0.97
8	13	0.09	20	8.3	0.0	2	23	402	422	401	422	0.96
9	13	0.00026	0.058	16.3	1.3	1	20	428	447	428	450	0.92
10	13	0.00022	0.051	16.5	0.5	1	23	458	480	458	480	0.99
11	13	0.0023	0.53	13.3	5.5	1	23	486	508	486	508	0.98
12	13	5.2e-07	0.00012	24.8	2.6	1	23	514	536	514	536	0.97
13	13	0.0014	0.32	14.0	6.9	1	23	542	564	542	565	0.95

Sequence Information

Coding Sequence: ATGGAAAGTAATGGTGCTGCGAGTGATATAGCATGGAGTAGAATGCAGTACGAAGGTAGTTCAGCAACATCAACATCTTACGATCTTTTAGCTCGCGAAACTTGGGAAGGTTCAGATTGTTCTGATTCTGAAGTACCACCACTCCAAAGCCGGATACCACCCCATATCCTTTATAGTCCCGATGTGGATGATACACCTACTATTGTAAGCGTTACTGACCCTCCGTTAAATTTCAAGTGTTCCATTTGTGGCCAAGGTTTCAAATGTCCAAAGGAACGTAGGGTACATCAGAGTGAAGTGCATAGTGAAAAAACTGGCATTAAAAATGATGCTAAAACATCCACCAATATTATTGGCTCAAGAGTAGTTAACAAGAAGCccattaaaaagttaattattaaaccgaagaaaactgaaattaaaagtgaaaataattttgataacgtTTTCACCAATAAGCTCAAGTTGGATACTAGTGTAGACGAACAAAATGGTGTAAGAGAGGAAGAAAGGGCATCGGTGATAGCAGCTGTAGGCAATGAATGTGATATTGATGATAAGAAAGATGTTAAGTATTGTGTTTGTTCCATCTGCGATTTAGTGTTTCCTGATAATCGGTCATTAAAGAAGCATAAACAGGAACTTCATGGTAGGTCTTATGGAACTCGTTATAAATGTGATACTTGTGGAGAAAATCTACAAAATGAGGCCAAGTATACTGAACATTTACGAACTCATCCCTTAGAATGCCGATTATGTGGAAAGTATTTTTACAGGCGTCAAAACCTACAGCTCCATATGAAACGGCATTTGGGTATCAAGCCATATATGTGCGACATGTGTCAGAAGTCATTTttaaccaaacaaaaattagaCGAACATAAGAATGTACACACAGGGGAGGCCCCTATTAAATGTACGATGTGCGATGAAACATTTCGAAGACATTCAAATCTAGTACAACATCGAAATCGTCATCatttaaatatcaagaagaAGGTGAAAGATTACATATGCTTTTGTGGAGAAATTCTTCactcaaaaaagaaattagcgTGGCATAAAGAAATTCACGATACTAAACCAAAAGCGTGTGCCCACTGTAACGAAAAATTTGTACACATGGCTAGTTTAACGAGGCACATGCGACGAGCACATAATGAACGTTTTGTGCCAAAACAAGAAAGAAGTACTGAAAATGTAGAATGTCCAATTTGTAAAGGAATTTATCTTAGGTCTTCGCTGGAAGTCCACATCCGAAATCACAGTGGGCACAGACCGTACACTTGTTTAATTTGTAGTAAAGATTTTACTACCAAGTGGAATTTGAAGCTCCACAAATGGACACATGCAGCAAGGGCTTCGAAACCTTTTAAATGTGACCAATGTAAGGGAGCCTTCATCAGAGAAACAGACTATACAGCTCACATGAATTCTCATAAAAGTGTTAGGCCCTATACGTGTAATCATTGTGGTGCTCAGTTTATACGGAAGTATAACTGTCAGAGGCATGTTAAAGAACATGAGAAAGCCAAAACTTTTGCATGTCAGGTTTGTGGTAAAAGTTTTCACAGATCATATTATCTTAAAGATCATATGCGAGTGCATAGTGGCCTAAGGCCGTTTTCCTGTCACATTTGTGGCAAAAcatctactactaaatctaatcataataagcatgttATGATACATCATGCTAAAGAACCTGTTAGCACTGAAAATTGA
Protein Sequence: MESNGAASDIAWSRMQYEGSSATSTSYDLLARETWEGSDCSDSEVPPLQSRIPPHILYSPDVDDTPTIVSVTDPPLNFKCSICGQGFKCPKERRVHQSEVHSEKTGIKNDAKTSTNIIGSRVVNKKPIKKLIIKPKKTEIKSENNFDNVFTNKLKLDTSVDEQNGVREEERASVIAAVGNECDIDDKKDVKYCVCSICDLVFPDNRSLKKHKQELHGRSYGTRYKCDTCGENLQNEAKYTEHLRTHPLECRLCGKYFYRRQNLQLHMKRHLGIKPYMCDMCQKSFLTKQKLDEHKNVHTGEAPIKCTMCDETFRRHSNLVQHRNRHHLNIKKKVKDYICFCGEILHSKKKLAWHKEIHDTKPKACAHCNEKFVHMASLTRHMRRAHNERFVPKQERSTENVECPICKGIYLRSSLEVHIRNHSGHRPYTCLICSKDFTTKWNLKLHKWTHAARASKPFKCDQCKGAFIRETDYTAHMNSHKSVRPYTCNHCGAQFIRKYNCQRHVKEHEKAKTFACQVCGKSFHRSYYLKDHMRVHSGLRPFSCHICGKTSTTKSNHNKHVMIHHAKEPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -