Mvil080895.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melanotus villosus
Gene Symbol
-
Assembly
GCA_963082815.1
Location
OY720426.1:4876252-4882939[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.018 4.1 10.5 0.2 2 23 132 153 131 153 0.97
2 14 7.1e-05 0.016 18.1 2.5 1 23 159 181 159 181 0.98
3 14 0.00043 0.098 15.6 1.2 2 23 188 209 187 209 0.97
4 14 6.9e-05 0.016 18.1 0.3 1 23 215 237 215 237 0.99
5 14 8e-05 0.018 17.9 2.3 1 23 264 286 264 286 0.99
6 14 2.3e-05 0.0051 19.6 1.7 1 23 292 314 292 314 0.98
7 14 1.4 3.3e+02 4.5 0.5 1 15 320 334 320 337 0.80
8 14 0.019 4.3 10.4 0.3 2 23 598 619 597 619 0.97
9 14 3.5e-05 0.0079 19.0 3.1 1 23 625 647 625 647 0.99
10 14 0.0022 0.49 13.4 2.4 1 23 653 675 653 675 0.98
11 14 4.4e-05 0.0098 18.7 2.3 1 23 681 703 681 703 0.99
12 14 0.00095 0.22 14.5 2.7 1 23 734 756 734 756 0.99
13 14 4.6e-05 0.01 18.6 1.8 1 23 762 784 762 784 0.98
14 14 0.015 3.3 10.8 0.8 1 23 790 813 790 813 0.96

Sequence Information

Coding Sequence
ATGGCCTGTATCCAACAGGACAATATATCTATAAAATCGGAAGTAGATGACGAAGAACCGGTATGTCCGATTGAAGAAGTATTCCTAGAATGTAGCGAACCTATTAAACTTGAAACTATCGAATATCCAAATAATTCCCTTGCAGAAGTATCCGATTATTCTAATCATGATAGTGAAGAATACTCGTCGTTGTACTCGAATGCACAAGACAAGGATGAAAGTGAAACCGAGCCTTTTCAATTAGAAGTAAAATCAGAACAATCAAccgaaatattttttgaagcgAACATTCCCAAAGACAACAAGCCGGCAGTATACAATTCAATTCCCAAGAAACGTAGAAATCCATCGGAACGCACTAATTTAATGActcaaattagtaaaaattcgTGGCAATGTGTAGTGTGCAagttgttatttgaaaaacgggAAAACTTGGTACAACATGTAAAAATCCACATAGGCGAGAAACCGTACGCTTGCAAGGATTGTTCGTACCGTGGCATCAGAAAATCGCACTTGTTGCGGCACATAAAAACCCACAGGGGTGAAAAACCGGTCGAATGCGAACAATGCGGTTACAAATGTTCTCTCCGAAGTACCTTAAGTGTACATATGAAAATACATTCCAATAATAGACCATTTAAGTGCAGCCAATGCGATTACGCAGCCATAAGAAGACCCGATTTAAATCGTCACATGAAAATACACGGCGAAAACACAATAGGCGATTGCATACGTCTTcagcaaaaaaattacattaatacaAACTGTGACATGAAGGATTCTTACAGGTGCATGGTTTGTCCGTACATAACTACACGAAAAACACATTTAGAACAGCATATTAAAACACATACTGGTGAAAAACCGCACAGATGTAAAATATGTGATCGAGCATTCTCGTTGATCGGTAATTACCGTGTTCATATGAAAAcccatacgggagaaaaaccatttaaatgTAGTAAGTGCGACTATAAAGCTGTGAGGAGGAGCTCTAACACCGCTACTAGTTCCGACTTTCAAATTTCACCACCGCACAGAGCACAGACTAATTCACAATGCATTCAAGTTGATGTAGTTTCTGATACTGGAATAGTAAACTTTCAGCATCAGTGTAAAATCTTAAATCAAAAGTTGAAATACATAAAAGTTATTCAAAGTAATTCAGAACCAAAGGATATGGCCGATATCAAACaggaaaatatatatataaaatcAGAAGTAGACGACGAAGAACCAGTATGTCCGATTGAAGAAGTATTCGTAGAATGTAGCGACCCAATTAAACTTGAAACTGTCGAATATCCAAATAATTCCTTTGTAGAAGTATCCGATTATTCTAATCATGATAGCGAAGAATACTCGGTGTTGTACTCGAACGAACCAAAGGATATGGCCAATATCAAACAGgaaaatatgaatataaaatcGGAAGTAGACGATGAAGAACCGGTATGTCTGATCGAAGAAGTATTCGTAGAATGTAGCGACCCAATTAAACTTGAAACTATCGAATATCCAAATAATTCCCTTGCAGAAGTATCCGATTGTTCTAATCATGATAGCGAAGAATACTCGGCGTTGTACTCGAACGCGGAAGACAAGGATGAAAGTGAAACCGAGCCTTTTCAATTAGAAGTAAAATCGGAACATTCAAccgaaatattttttgaagcaaACATTCCCAAAGGCAATATGTCGACAGTAAACAATTCAATTCCCAAGAAACGTAGAAATCCAACAGAACGCGTTAATTTAATGACTCAAATTAGTGAAAATTCGTGGCAATGTGTAGTGTGCAagttgttatttgaaaaacgtaaAAACCTAGTGCAACATGTAAAAATCCATATAGGCGAGAAACCGTACACTTGCAACGATTGTTCGTACCGTGGCATCAGAAAATCGCACTTGCTACGGCACATAAAAACCCATACCGGTGAAAAACCGTTTGAATGCGAATTATGCAGTTACAAATGTTCGCTCCGAAGTACATTAAGCGTACATATGAAAATACATTCCAATAACAGACCATTCAAGTGCAGCCAATGCGATTACGCAGCCGTAAGAAGAACCCATTTAAATCGTCACATGAAAATACACGGTGAAAAACCAAGCGAAATCGTAATAGGCGATTGCATACGTCCGCAACAAAAAACTTACATCAATAAGAACTGCGACATGGAGGATTCTTACAGGTGCATGCTTTGTCCGTACATAACTACAAGAAAGACGCATTTAGATCAGCATATTAAAACGCATACTGGTGAAAAACCACACAGATGTAAAATATGTGATCGAGGATTCTCGTTGATTGGTAATTACCGTGTTCATATGAAAAcccatacgggagaaaaaccatttaaatgTAGTAAATGTGACTATAAAGCTGTGAGGAGAAATGCTGTAAGACAACATATAAAAGCCACTCATGTTTTGTAA
Protein Sequence
MACIQQDNISIKSEVDDEEPVCPIEEVFLECSEPIKLETIEYPNNSLAEVSDYSNHDSEEYSSLYSNAQDKDESETEPFQLEVKSEQSTEIFFEANIPKDNKPAVYNSIPKKRRNPSERTNLMTQISKNSWQCVVCKLLFEKRENLVQHVKIHIGEKPYACKDCSYRGIRKSHLLRHIKTHRGEKPVECEQCGYKCSLRSTLSVHMKIHSNNRPFKCSQCDYAAIRRPDLNRHMKIHGENTIGDCIRLQQKNYINTNCDMKDSYRCMVCPYITTRKTHLEQHIKTHTGEKPHRCKICDRAFSLIGNYRVHMKTHTGEKPFKCSKCDYKAVRRSSNTATSSDFQISPPHRAQTNSQCIQVDVVSDTGIVNFQHQCKILNQKLKYIKVIQSNSEPKDMADIKQENIYIKSEVDDEEPVCPIEEVFVECSDPIKLETVEYPNNSFVEVSDYSNHDSEEYSVLYSNEPKDMANIKQENMNIKSEVDDEEPVCLIEEVFVECSDPIKLETIEYPNNSLAEVSDCSNHDSEEYSALYSNAEDKDESETEPFQLEVKSEHSTEIFFEANIPKGNMSTVNNSIPKKRRNPTERVNLMTQISENSWQCVVCKLLFEKRKNLVQHVKIHIGEKPYTCNDCSYRGIRKSHLLRHIKTHTGEKPFECELCSYKCSLRSTLSVHMKIHSNNRPFKCSQCDYAAVRRTHLNRHMKIHGEKPSEIVIGDCIRPQQKTYINKNCDMEDSYRCMLCPYITTRKTHLDQHIKTHTGEKPHRCKICDRGFSLIGNYRVHMKTHTGEKPFKCSKCDYKAVRRNAVRQHIKATHVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-