Basic Information

Insect: Melanotus villosus
Gene Symbol: -
Assembly: GCA_963082815.1
Location: OY720421.1:27851484-27852944[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.025 5.7 10.0 2.1 1 20 119 138 119 140 0.86

2 12 0.00086 0.19 14.6 2.7 3 23 149 169 147 169 0.95

3 12 8.4e-08 1.9e-05 27.3 1.7 1 23 175 197 175 197 0.99

4 12 5.4e-06 0.0012 21.6 1.8 1 23 203 225 203 225 0.98

5 12 5.9e-05 0.013 18.3 2.0 1 23 231 253 231 253 0.98

6 12 0.00032 0.072 16.0 1.1 2 23 263 284 262 284 0.97

7 12 0.00041 0.093 15.6 1.1 1 23 291 313 291 313 0.95

8 12 2.8e-08 6.4e-06 28.7 3.9 1 23 322 344 322 344 0.99

9 12 0.0075 1.7 11.7 1.7 1 23 350 372 350 372 0.97

10 12 0.0001 0.023 17.6 0.8 1 23 378 400 378 400 0.97

11 12 2.1e-05 0.0048 19.7 1.1 1 23 406 428 406 428 0.98

12 12 4.3e-05 0.0097 18.7 0.9 3 23 436 457 434 457 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.025	5.7	10.0	2.1	1	20	119	138	119	140	0.86
2	12	0.00086	0.19	14.6	2.7	3	23	149	169	147	169	0.95
3	12	8.4e-08	1.9e-05	27.3	1.7	1	23	175	197	175	197	0.99
4	12	5.4e-06	0.0012	21.6	1.8	1	23	203	225	203	225	0.98
5	12	5.9e-05	0.013	18.3	2.0	1	23	231	253	231	253	0.98
6	12	0.00032	0.072	16.0	1.1	2	23	263	284	262	284	0.97
7	12	0.00041	0.093	15.6	1.1	1	23	291	313	291	313	0.95
8	12	2.8e-08	6.4e-06	28.7	3.9	1	23	322	344	322	344	0.99
9	12	0.0075	1.7	11.7	1.7	1	23	350	372	350	372	0.97
10	12	0.0001	0.023	17.6	0.8	1	23	378	400	378	400	0.97
11	12	2.1e-05	0.0048	19.7	1.1	1	23	406	428	406	428	0.98
12	12	4.3e-05	0.0097	18.7	0.9	3	23	436	457	434	457	0.97

Sequence Information

Coding Sequence: ATGGCTACAATAACAGGTGACTTAGAAAACCCTTTGATTCAAGAAACTAAACCTATCAATTTTGAGGAAATCGtagtaaaacaagaaaaaaacgaaaattttataGCAGAATCTGTAGCAGATAATATTATCAATGAAAATTCTGTAAACGAAGTTGTTAAGGAAGAAATACGTTCTGATAGTGACGCATTAGAAAATATATCGGTACCCCAACACGTAATTGACTCCGTTAAACAGGAACACAATTCAAACGATACACAACACTCCACTGATTCTGATACAttcgaagaagaagatgaagaatcTATCGACAATGAAAATTCATCTCAAGAAACACAAGACGATAATAAAACTTACAAATGCAAAGTTTGTTCGCAGTCATTTACTACTTTCAAGTCTTTAGATTTTCACATAAAAAAACCAGCACGAGAAAGAACTTTTGGATGTTGTGCTTGTGATAAATCATTCCGTGACATGACTCAGTTAAATGTTCATACgcgtaaacatacaggagagaAACCGTATGAATGTAAGATTTGTACGAAAAAATTCTCGATAAAcggtaatttaaataaacatatgcGAACACATACTGGTGAAAAACGGTTTATTTGTGAAGTATGTGAACGTAAATTTACCCAGTTTGCTCATTTAGAAGATCATATGAAAACACATTCAGTTGAACGTCCTTTCATATGTGAACAATGTGATAGTAGATTTAAAACTAAGGCTCGATTACGTAAACATATTAAATCCCACGATCAAGAAGTTCGAAAGAAAAACATATCCTGTCAGATATGTTTTAGGACGTTTTGGAGTTCTAAGCAGCTAATGGTTCATATGCGTCGTCACACTGATCGGGAGTATCCATTTGAATGCATTGTCTGTGACAAGAAATTCAAAGAATATCCGAATTATCAAACCCATTTAAGAACACATAAGCAGCACCCTGGAATTCGATCCTACAAATGTCATTTATGCGGTAAAGCTTTTGCATCTTCAAGTCATTTACGTAGGCATATAAATTCTCATGCCGGTTTAAAACCATACATATGTGATTTATGTATGCGTGGTTTTCCTTGTGCTCAGAATTTAAAACGACACATGAAGACCCATACAGGGGAAAAACCACATGTTTGTGAGACTTGCCAGAAAGCATTTTTGACAATCGAAAATTTAAATCGTCATATTCGGATACACACAGGTGAAAAGCCGTTTCCTTGTCCAACATGTGGCCGAAGATTTGCACATAGTACTACAGTTAAAGAACATTTACGATTACATACAGGGGAGAAACCGTATGGGTGTAGTATTTGTGATAAACGTTTCGGTATGAATAAATTGTTATACAGACATATCCGCACTAGACATCCCGAACACGCGGGGGTtataattaaaagtgaaaatcaGTATCCTTttcaatttattgatattaaaaaagaacCTGTAGACAATTTATAA
Protein Sequence: MATITGDLENPLIQETKPINFEEIVVKQEKNENFIAESVADNIINENSVNEVVKEEIRSDSDALENISVPQHVIDSVKQEHNSNDTQHSTDSDTFEEEDEESIDNENSSQETQDDNKTYKCKVCSQSFTTFKSLDFHIKKPARERTFGCCACDKSFRDMTQLNVHTRKHTGEKPYECKICTKKFSINGNLNKHMRTHTGEKRFICEVCERKFTQFAHLEDHMKTHSVERPFICEQCDSRFKTKARLRKHIKSHDQEVRKKNISCQICFRTFWSSKQLMVHMRRHTDREYPFECIVCDKKFKEYPNYQTHLRTHKQHPGIRSYKCHLCGKAFASSSHLRRHINSHAGLKPYICDLCMRGFPCAQNLKRHMKTHTGEKPHVCETCQKAFLTIENLNRHIRIHTGEKPFPCPTCGRRFAHSTTVKEHLRLHTGEKPYGCSICDKRFGMNKLLYRHIRTRHPEHAGVIIKSENQYPFQFIDIKKEPVDNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -