Basic Information

Insect: Melanotus villosus
Gene Symbol: -
Assembly: GCA_963082815.1
Location: OY720426.1:6905635-6911046[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.8 1.1e+03 2.8 0.5 5 23 187 206 184 206 0.89

2 14 0.35 80 6.4 1.0 3 23 214 231 214 231 0.90

3 14 0.0003 0.068 16.1 2.1 2 23 237 258 236 258 0.97

4 14 3.8e-05 0.0085 18.9 5.6 1 23 264 286 264 286 0.99

5 14 0.0072 1.6 11.7 8.7 1 23 292 314 292 314 0.98

6 14 0.15 35 7.5 1.1 3 19 323 339 321 345 0.88

7 14 3.7e-07 8.4e-05 25.2 0.7 3 23 412 432 411 432 0.99

8 14 1.2e-05 0.0028 20.4 0.8 1 23 438 460 438 460 0.99

9 14 1.5e-06 0.00034 23.3 1.7 1 23 466 488 466 488 0.97

10 14 7.1e-06 0.0016 21.2 1.9 2 23 494 515 494 515 0.97

11 14 2.9e-05 0.0065 19.3 1.1 1 23 521 543 521 543 0.96

12 14 2.7e-08 6.1e-06 28.8 1.5 1 23 549 571 549 571 0.99

13 14 7.2e-05 0.016 18.0 4.3 1 23 577 599 577 599 0.98

14 14 0.00023 0.053 16.4 0.6 1 23 610 633 610 633 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.8	1.1e+03	2.8	0.5	5	23	187	206	184	206	0.89
2	14	0.35	80	6.4	1.0	3	23	214	231	214	231	0.90
3	14	0.0003	0.068	16.1	2.1	2	23	237	258	236	258	0.97
4	14	3.8e-05	0.0085	18.9	5.6	1	23	264	286	264	286	0.99
5	14	0.0072	1.6	11.7	8.7	1	23	292	314	292	314	0.98
6	14	0.15	35	7.5	1.1	3	19	323	339	321	345	0.88
7	14	3.7e-07	8.4e-05	25.2	0.7	3	23	412	432	411	432	0.99
8	14	1.2e-05	0.0028	20.4	0.8	1	23	438	460	438	460	0.99
9	14	1.5e-06	0.00034	23.3	1.7	1	23	466	488	466	488	0.97
10	14	7.1e-06	0.0016	21.2	1.9	2	23	494	515	494	515	0.97
11	14	2.9e-05	0.0065	19.3	1.1	1	23	521	543	521	543	0.96
12	14	2.7e-08	6.1e-06	28.8	1.5	1	23	549	571	549	571	0.99
13	14	7.2e-05	0.016	18.0	4.3	1	23	577	599	577	599	0.98
14	14	0.00023	0.053	16.4	0.6	1	23	610	633	610	633	0.95

Sequence Information

Coding Sequence: atggaaaaattaagttattcaaatttaaatctgagTAAAATTTGCAGAGCGTGTTTGTGCGAgaatgaaaatatgaaaaatatgtttaataacGAACAGAATGAAGAGAAGCTGTTAGAAATGTTTGTCGCTGTAGCGAGTGTTGAGGTAAAACAATCAAACGTATTATCCTCATCCATATGTAaaggatgcgaagaaaaactaAGTGCATCTTATAACTTCCGACAACAGTGCCAAAAATCCAACGAAGTATTACTAGGATATATTAACACCaacattaataaacataaaGAAACGGAGGAAGATTTAAACGAAACCAAAAATGTTGCAATTAAAATCGAAGAAGAAATCCATTTTAAACAGGAAGATTCGTCGGACAATTGTGAAAAAAATTCGGACGATTCGGATTACGAACCACAACGCACGAAAAGAGTAcaggttaaaaagaaaactaaagatGTTAAGCAAACTATGCGTTTGACTCAGTTTTCGTACGATGAGGTATCGCAGGCTATTAAAGAatctaaaaggaaattttttgaaaataccgaATGCATTCGATGTGGATTTGTTGGGAGTAATACTAGGGCGTTGTCGGTTCATATGTCGCATTTACATAAAGACCTAAAGGAGCGGTGGTGTCCGCACTGTAACCGTGAATTCGACGACTTAACCGAACACCTGGAAGTGCATGGGAACGAAGatttaaaatgtcaattttgtgataaaatattCCAAGCCAAAGGCCACTTAACTGAACATCTTCGAAGTCATTCAgGTATAAGGCCGTACAAATGTGAATCGTGCGATAAGTGTTTTATATCCCAGAGGCATTTAAACGTACATTTTAGAATACATTCGAATGAGAGGCCGTATAAATGCCATTTATGTTTGCGATCGTTCATACAACataactcattaaaaaatcaCTTAAAACACCATGAAAAAGgtacaactaaaattatttgtaataaatgtaataaagaatataaagacACGGCGAGTTTTAATGGACACGGTTGTGAAAACGGACATACGGAGCATATGGACGGTAGCGAAAAGGAtattagtattgaaaataatgacaCACAAAAACTATTGTTAGTTGCGCAGAATTTTTGCGTGGAGTGCAATAAAAAGGTTCGTAGCTTAGCTTTACATACAAGGCAAGTCCATTCTAACGAATCCAAAGTATTTAATGAATATGGTGATAACgttttagataataaattatgtacagTTTGTGGAAAACAATttaaAACTGCCTCCAAATTAAGAGTACACATGAGGGTTCATACCGGTGAGGCTCCTTATAAATGTTCATATTGTGATAAAAGGGTTAGCACACGAAATCAGTTGGTTGTCCACGAACGGATCCACACCGGAGAAAGACCGCATGTCTGTCATGTATGTGGAAAAGGTTTTGCACAATCAAGCGTATTAAACACACATATGAGGTTACATACAGGTCGACCGGAAGTTTGTAAAATTTGCGAACAAAGATTCTGTAGACCTGCCGAGTTACGCTTACATATGAGGAAACACACAGGTGAAAAACCGTATTTATGCACAGAATGCGGCCAAGCTTTCATCCAACGCAGCCATTTAGTCGAACACAACAAAACACATAGCGATCTAAGACCATATCAATGCACCTACTGTGACAAAGCCTTCAAGCAAAATTCTTCGTTAAAATCACACATACAAATTCATTTAGGATGTAAACCATTCAAATGCAGTCAATGTCCGTATGCCTGTCGACAGAGTTATAGCTTGACGCAGCACATGAAACAACATTCTAGCGATGCACCGAGACCTGAGCGACCTCATATATGTTTAATTTGTAACAAGACATTCACAACGGTTGCAATGCTTACTTCTCATGCCAGTACGATACATAACGTCAGTACGTGTTTGTTTGATCAGTGA
Protein Sequence: MEKLSYSNLNLSKICRACLCENENMKNMFNNEQNEEKLLEMFVAVASVEVKQSNVLSSSICKGCEEKLSASYNFRQQCQKSNEVLLGYINTNINKHKETEEDLNETKNVAIKIEEEIHFKQEDSSDNCEKNSDDSDYEPQRTKRVQVKKKTKDVKQTMRLTQFSYDEVSQAIKESKRKFFENTECIRCGFVGSNTRALSVHMSHLHKDLKERWCPHCNREFDDLTEHLEVHGNEDLKCQFCDKIFQAKGHLTEHLRSHSGIRPYKCESCDKCFISQRHLNVHFRIHSNERPYKCHLCLRSFIQHNSLKNHLKHHEKGTTKIICNKCNKEYKDTASFNGHGCENGHTEHMDGSEKDISIENNDTQKLLLVAQNFCVECNKKVRSLALHTRQVHSNESKVFNEYGDNVLDNKLCTVCGKQFKTASKLRVHMRVHTGEAPYKCSYCDKRVSTRNQLVVHERIHTGERPHVCHVCGKGFAQSSVLNTHMRLHTGRPEVCKICEQRFCRPAELRLHMRKHTGEKPYLCTECGQAFIQRSHLVEHNKTHSDLRPYQCTYCDKAFKQNSSLKSHIQIHLGCKPFKCSQCPYACRQSYSLTQHMKQHSSDAPRPERPHICLICNKTFTTVAMLTSHASTIHNVSTCLFDQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -